; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC10G190210 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC10G190210
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionATP synthase subunit c, chloroplastic
Genome locationCmU531Chr10:17333357..17337334
RNA-Seq ExpressionCmUC10G190210
SyntenyCmUC10G190210
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component)
GO:0008289 - lipid binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domainsIPR002379 - V-ATPase proteolipid subunit C-like domain
IPR035921 - F/V-ATP synthase subunit C superfamily
IPR038662 - F1F0 ATP synthase subunit C superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5511204.1 hypothetical protein DKX38_030129 [Salix brachista]1.1e-0451.32Show/hide
Query:  ESVSRTPSLQKYLVWAYLEANLWDSWFQCSSGIILHLTRWRDIPMISAASVIAAGLAVGLASIGPGVGQGTAVGQA
        E   R    + +++  +L  +L  S+F C   I+         P+ISAASVIAAGLAVGLASIGPGVGQGTA GQA
Subjt:  ESVSRTPSLQKYLVWAYLEANLWDSWFQCSSGIILHLTRWRDIPMISAASVIAAGLAVGLASIGPGVGQGTAVGQA

THU42292.1 hypothetical protein C4D60_Mb00t13080 [Musa balbisiana]8.1e-0551.25Show/hide
Query:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQAA-----RTTPEDQQSGPVASLPVASSNSGSTLIWEVDITSSLARKID
        P+ISAASVIAAGLAVGLASIGPGVGQGTA GQA      +   E +  G +A +PV+    G        + ++LA+ ID
Subjt:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQAA-----RTTPEDQQSGPVASLPVASSNSGSTLIWEVDITSSLARKID

VDD65220.1 unnamed protein product [Brassica oleracea]1.8e-0488.57Show/hide
Query:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQAAR
        P++SAASVIAAGLAVGLASIGPGVGQGTA GQA R
Subjt:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQAAR

YP_009742428.1 AtpH [Blepharis ciliaris]2.4e-0496.97Show/hide
Query:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA
        PMISAASVIAAGLAVGLASIGPGVGQGTA GQA
Subjt:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA

YP_010035500.1 ATP synthase CF0 subunit III [Pouzolzia hirta]1.1e-0458.06Show/hide
Query:  LEANLWDSWFQCSSGIILHLTRWRDI---PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA
        +E+   +S F C       L  + ++   P+ISAASVIAAGLAVGLASIGPGVGQGTA GQA
Subjt:  LEANLWDSWFQCSSGIILHLTRWRDI---PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA

TrEMBL top hitse value%identityAlignment
A0A3P6GHZ0 ATP-synt_C domain-containing protein8.8e-0588.57Show/hide
Query:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQAAR
        P++SAASVIAAGLAVGLASIGPGVGQGTA GQA R
Subjt:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQAAR

A0A4S8I5Q9 ATP-synt_C domain-containing protein3.9e-0551.25Show/hide
Query:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQAA-----RTTPEDQQSGPVASLPVASSNSGSTLIWEVDITSSLARKID
        P+ISAASVIAAGLAVGLASIGPGVGQGTA GQA      +   E +  G +A +PV+    G        + ++LA+ ID
Subjt:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQAA-----RTTPEDQQSGPVASLPVASSNSGSTLIWEVDITSSLARKID

A0A5N5IZQ0 ATP synthase subunit c, chloroplastic5.2e-0551.32Show/hide
Query:  ESVSRTPSLQKYLVWAYLEANLWDSWFQCSSGIILHLTRWRDIPMISAASVIAAGLAVGLASIGPGVGQGTAVGQA
        E   R    + +++  +L  +L  S+F C   I+         P+ISAASVIAAGLAVGLASIGPGVGQGTA GQA
Subjt:  ESVSRTPSLQKYLVWAYLEANLWDSWFQCSSGIILHLTRWRDIPMISAASVIAAGLAVGLASIGPGVGQGTAVGQA

A0A7T8ZS27 ATP synthase CF0 subunit III5.2e-0558.06Show/hide
Query:  LEANLWDSWFQCSSGIILHLTRWRDI---PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA
        +E+   +S F C       L  + ++   P+ISAASVIAAGLAVGLASIGPGVGQGTA GQA
Subjt:  LEANLWDSWFQCSSGIILHLTRWRDI---PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA

A0A803M147 Uncharacterized protein8.8e-0584.21Show/hide
Query:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQAARTTP
        P+ISAASVIAAGLAVGLASIGPGVGQGTA GQA    P
Subjt:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQAARTTP

SwissProt top hitse value%identityAlignment
A4QJA2 ATP synthase subunit c, chloroplastic6.9e-0793.94Show/hide
Query:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA
        P+ISAASVIAAGLAVGLASIGPGVGQGTA GQA
Subjt:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA

A4QJI6 ATP synthase subunit c, chloroplastic6.9e-0793.94Show/hide
Query:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA
        P+ISAASVIAAGLAVGLASIGPGVGQGTA GQA
Subjt:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA

Q3V547 ATP synthase subunit c, chloroplastic6.9e-0793.94Show/hide
Query:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA
        P+ISAASVIAAGLAVGLASIGPGVGQGTA GQA
Subjt:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA

Q4FGF2 ATP synthase subunit c, chloroplastic6.9e-0793.94Show/hide
Query:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA
        P+ISAASVIAAGLAVGLASIGPGVGQGTA GQA
Subjt:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA

Q85FN2 ATP synthase subunit c, chloroplastic6.9e-0793.94Show/hide
Query:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA
        P+ISAASVIAAGLAVGLASIGPGVGQGTA GQA
Subjt:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA

Arabidopsis top hitse value%identityAlignment
ATCG00140.1 ATP synthase subunit C family protein6.4e-0890.91Show/hide
Query:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA
        P++SAASVIAAGLAVGLASIGPGVGQGTA GQA
Subjt:  PMISAASVIAAGLAVGLASIGPGVGQGTAVGQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAAAAAAATGGCTAAGTATCAGCTATGCATTGGTGGCAACACGCCTTGATGGAAGTAGTTTTGGCGTGGACGCAGAGGTGATGGAAGACTGTCACGGGGTGTG
GAGAGCCACCCTGCATCGAAGGTTATCTTGCAATAAACGCATTGAAGGCGGTAAGGCGTTGGAAGATGAAGGCCACGAGGCATTGAGAGCTAATTTGCGATGGGACCACT
ATGCGGTGAACGCTACCATGCGTCGAAAGTGGAGGCTGTGCATTGCGGAAGCCAAACATAGAAGGTATGCATTGAATAGATTATGGTATAAAGACGAAATGGAGGTTAAG
TTGATGGGAGGTAGAAGAAGATGTTCATGTCTATTTGGAGTGGAAATCTCGTCGTTACCGTGGAGGAAACTTGAGCTAGAGCAGAGGACTCAGCTGGAAGAACGAACTGA
GGAAACGATGGTTAGGGCCGAAATTCTGAGGTTAGAGAAATTTGGAGTTGTTGAAGGATATGTCCTAAACGGAGAGGATATTCTCTATGGAATTTTGAGTTCTGAAATTG
GCCAGAATGTGATGTTTAGCAGGTTGAAGAAGGAAGAGGAAAGGAAGAAGGAAATTGTTCTGCTGCAGTGTCTCGCTGGGTGTCGCTCCTCAGGTAGTTTCGCTAGTTAC
GTTCAACCTAGTATTGCTGGTAGTCTTTGGTTTGTCTATGGAGTAATGTTATTAATGAATGTTAAGGAAAAAGGAAGACTAAGGAAAACTGAACGTGAGAAATGTGTATT
TTCAGGCCAGGAAGAGCTCAGGGAGGCTTATAATACACTTAGAGCCGAGACAAGTTGTGATGCTGAGGGACTTCATGTGAAGGCACATGGTAAAGTTGACATAATTGAAT
TCGGTGCTGAGGGACAGAATGTGAAGGCACTCGATACTAAGTTGTGCCTTGTCACGACAAGAGTTAGTCATTTGCCATGGGATAGTGAGGATGTCGATATGGATGTAGAG
AGCGTGTCCAGGACGCCTAGCCTACAGAAGTATCTCGTCTGGGCCTATCTTGAAGCAAACCTCTGGGATAGTTGGTTTCAGTGTAGTTCTGGGATAATTCTTCATCTCAC
TAGGTGGAGGGACATTCCCATGATTTCTGCCGCTTCCGTTATTGCTGCTGGGTTGGCCGTCGGGCTTGCTTCTATTGGACCTGGGGTTGGTCAAGGTACTGCTGTGGGCC
AAGCTGCTAGGACTACTCCAGAAGATCAGCAGTCGGGACCTGTTGCTTCCCTTCCAGTCGCTTCCTCAAATTCTGGATCCACTTTGATTTGGGAAGTGGATATTACGTCC
AGCCTTGCTAGAAAGATAGACCCTGGAACTTCCAAGGCCAAGAAGGAAGACCTGGATGATCCGCTCAAACTCGTTTCAGAGTTCGCCCCTCCATCTGTGGAAACTGGGGA
TGAGTCCAATCCTAGGGCGAAAAGTAGGCTGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAAAAAAATGGCTAAGTATCAGCTATGCATTGGTGGCAACACGCCTTGATGGAAGTAGTTTTGGCGTGGACGCAGAGGTGATGGAAGACTGTCACGGGGTGTG
GAGAGCCACCCTGCATCGAAGGTTATCTTGCAATAAACGCATTGAAGGCGGTAAGGCGTTGGAAGATGAAGGCCACGAGGCATTGAGAGCTAATTTGCGATGGGACCACT
ATGCGGTGAACGCTACCATGCGTCGAAAGTGGAGGCTGTGCATTGCGGAAGCCAAACATAGAAGGTATGCATTGAATAGATTATGGTATAAAGACGAAATGGAGGTTAAG
TTGATGGGAGGTAGAAGAAGATGTTCATGTCTATTTGGAGTGGAAATCTCGTCGTTACCGTGGAGGAAACTTGAGCTAGAGCAGAGGACTCAGCTGGAAGAACGAACTGA
GGAAACGATGGTTAGGGCCGAAATTCTGAGGTTAGAGAAATTTGGAGTTGTTGAAGGATATGTCCTAAACGGAGAGGATATTCTCTATGGAATTTTGAGTTCTGAAATTG
GCCAGAATGTGATGTTTAGCAGGTTGAAGAAGGAAGAGGAAAGGAAGAAGGAAATTGTTCTGCTGCAGTGTCTCGCTGGGTGTCGCTCCTCAGGTAGTTTCGCTAGTTAC
GTTCAACCTAGTATTGCTGGTAGTCTTTGGTTTGTCTATGGAGTAATGTTATTAATGAATGTTAAGGAAAAAGGAAGACTAAGGAAAACTGAACGTGAGAAATGTGTATT
TTCAGGCCAGGAAGAGCTCAGGGAGGCTTATAATACACTTAGAGCCGAGACAAGTTGTGATGCTGAGGGACTTCATGTGAAGGCACATGGTAAAGTTGACATAATTGAAT
TCGGTGCTGAGGGACAGAATGTGAAGGCACTCGATACTAAGTTGTGCCTTGTCACGACAAGAGTTAGTCATTTGCCATGGGATAGTGAGGATGTCGATATGGATGTAGAG
AGCGTGTCCAGGACGCCTAGCCTACAGAAGTATCTCGTCTGGGCCTATCTTGAAGCAAACCTCTGGGATAGTTGGTTTCAGTGTAGTTCTGGGATAATTCTTCATCTCAC
TAGGTGGAGGGACATTCCCATGATTTCTGCCGCTTCCGTTATTGCTGCTGGGTTGGCCGTCGGGCTTGCTTCTATTGGACCTGGGGTTGGTCAAGGTACTGCTGTGGGCC
AAGCTGCTAGGACTACTCCAGAAGATCAGCAGTCGGGACCTGTTGCTTCCCTTCCAGTCGCTTCCTCAAATTCTGGATCCACTTTGATTTGGGAAGTGGATATTACGTCC
AGCCTTGCTAGAAAGATAGACCCTGGAACTTCCAAGGCCAAGAAGGAAGACCTGGATGATCCGCTCAAACTCGTTTCAGAGTTCGCCCCTCCATCTGTGGAAACTGGGGA
TGAGTCCAATCCTAGGGCGAAAAGTAGGCTGATTTGA
Protein sequenceShow/hide protein sequence
MEEKKWLSISYALVATRLDGSSFGVDAEVMEDCHGVWRATLHRRLSCNKRIEGGKALEDEGHEALRANLRWDHYAVNATMRRKWRLCIAEAKHRRYALNRLWYKDEMEVK
LMGGRRRCSCLFGVEISSLPWRKLELEQRTQLEERTEETMVRAEILRLEKFGVVEGYVLNGEDILYGILSSEIGQNVMFSRLKKEEERKKEIVLLQCLAGCRSSGSFASY
VQPSIAGSLWFVYGVMLLMNVKEKGRLRKTEREKCVFSGQEELREAYNTLRAETSCDAEGLHVKAHGKVDIIEFGAEGQNVKALDTKLCLVTTRVSHLPWDSEDVDMDVE
SVSRTPSLQKYLVWAYLEANLWDSWFQCSSGIILHLTRWRDIPMISAASVIAAGLAVGLASIGPGVGQGTAVGQAARTTPEDQQSGPVASLPVASSNSGSTLIWEVDITS
SLARKIDPGTSKAKKEDLDDPLKLVSEFAPPSVETGDESNPRAKSRLI