; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC10G190400 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC10G190400
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionBeta-galactosidase
Genome locationCmU531Chr10:18017227..18017798
RNA-Seq ExpressionCmUC10G190400
SyntenyCmUC10G190400
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025363.1 Beta-galactosidase [Cucumis melo var. makuwa]3.9e-5776.55Show/hide
Query:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF
        FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRHL+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ 
Subjt:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF

Query:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA
        QTPLD  K SYP+TRL+ +VPLRVFGCT +V +FGPNQTKFTPRA
Subjt:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA

KAA0031941.1 Beta-galactosidase [Cucumis melo var. makuwa]3.9e-5776.55Show/hide
Query:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF
        FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRHL+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ 
Subjt:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF

Query:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA
        QTPLD  K SYP+TRL+ +VPLRVFGCT +V +FGPNQTKFTPRA
Subjt:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA

KAA0048203.1 Beta-galactosidase [Cucumis melo var. makuwa]3.9e-5776.55Show/hide
Query:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF
        FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRHL+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ 
Subjt:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF

Query:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA
        QTPLD  K SYP+TRL+ +VPLRVFGCT +V +FGPNQTKFTPRA
Subjt:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]3.9e-5776.55Show/hide
Query:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF
        FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRHL+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ 
Subjt:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF

Query:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA
        QTPLD  K SYP+TRL+ +VPLRVFGCT +V +FGPNQTKFTPRA
Subjt:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]3.9e-5776.55Show/hide
Query:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF
        FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRHL+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ 
Subjt:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF

Query:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA
        QTPLD  K SYP+TRL+ +VPLRVFGCT +V +FGPNQTKFTPRA
Subjt:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA

TrEMBL top hitse value%identityAlignment
A0A5A7SM64 Beta-galactosidase1.9e-5776.55Show/hide
Query:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF
        FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRHL+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ 
Subjt:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF

Query:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA
        QTPLD  K SYP+TRL+ +VPLRVFGCT +V +FGPNQTKFTPRA
Subjt:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA

A0A5A7V0Y9 Beta-galactosidase1.9e-5776.55Show/hide
Query:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF
        FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRHL+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ 
Subjt:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF

Query:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA
        QTPLD  K SYP+TRL+ +VPLRVFGCT +V +FGPNQTKFTPRA
Subjt:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA

A0A5A7VLQ7 Beta-galactosidase1.9e-5776.55Show/hide
Query:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF
        FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRHL+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ 
Subjt:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF

Query:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA
        QTPLD  K SYP+TRL+ +VPLRVFGCT +V +FGPNQTKFTPRA
Subjt:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA

A0A5D3BJK7 Beta-galactosidase1.9e-5776.55Show/hide
Query:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF
        FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRHL+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ 
Subjt:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF

Query:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA
        QTPLD  K SYP+TRL+ +VPLRVFGCT +V +FGPNQTKFTPRA
Subjt:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA

A0A5D3C4T4 Beta-galactosidase1.9e-5776.55Show/hide
Query:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF
        FY TI+TQF+ +IAILRSDNGREF  + L EFL+ KGI+HQ+SCAYTPQQNGVAERKNRHL+EVA+SLMLSTSL SYLWGDA+LTAA+LINRM SR+L+ 
Subjt:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF

Query:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA
        QTPLD  K SYP+TRL+ +VPLRVFGCT +V +FGPNQTKFTPRA
Subjt:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA

SwissProt top hitse value%identityAlignment
P04146 Copia protein5.7e-1940.6Show/hide
Query:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVL--
        F    E  FN ++  L  DNGRE+L+N +R+F   KGI +  +  +TPQ NGV+ER  R + E A++++    L    WG+AVLTA YLINR+ SR L  
Subjt:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVL--

Query:  NFQTPLDYFKLSYPTTRLIPDVPLRVFGCTIFV
        + +TP + +    P  +      LRVFG T++V
Subjt:  NFQTPLDYFKLSYPTTRLIPDVPLRVFGCTIFV

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-946.2e-1835.62Show/hide
Query:  QFYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLN
        +F+  +E +   ++  LRSDNG E+ +    E+ S  GI H+ +   TPQ NGVAER NR ++E  +S++    L    WG+AV TA YLINR  S  L 
Subjt:  QFYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLN

Query:  FQTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA
        F+ P   +     T + +    L+VFGC  F       +TK   ++
Subjt:  FQTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA

P47024 Transposon Ty4-J Gag-Pol polyprotein9.4e-0629.06Show/hide
Query:  IETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPL
        +ETQF+ ++  + SD G EF  + + E+   KGI H  +       NG AER  R ++  A +L+  ++L    W  AV +A  + N +  +    + PL
Subjt:  IETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNFQTPL

Query:  DYFKLSYPTTRLIPDVP
                T RL+  +P
Subjt:  DYFKLSYPTTRLIPDVP

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.9e-1436.09Show/hide
Query:  LQFYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVL
        + F   +E +F  +I    SDNG EF+   L E+ S  GI H +S  +TP+ NG++ERK+RH++E   +L+   S+    W  A   A YLINR+ + +L
Subjt:  LQFYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVL

Query:  NFQTPLDYFKLSYPTTRLIPDV-PLRVFGCTIF
          ++P   F+  + T+   P+   LRVFGC  +
Subjt:  NFQTPLDYFKLSYPTTRLIPDV-PLRVFGCTIF

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE27.6e-1636.92Show/hide
Query:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF
        F + +E +F  +I  L SDNG EF+   LR++LS  GI H +S  +TP+ NG++ERK+RH++E+  +L+   S+    W  A   A YLINR+ + +L  
Subjt:  FYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVLNF

Query:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIF
        Q+P        P         L+VFGC  +
Subjt:  QTPLDYFKLSYPTTRLIPDVPLRVFGCTIF

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGGGTCCATCACGAATTACCACTTCTTCAGTTTTACACCACCATTGAAACTCAATTTAATGCCCAAATTGCAATCCTTCGAAGTGACAATGGTCGTGAATTCCT
CACCAATACTCTTCGTGAGTTTTTATCCATTAAAGGTATTATTCACCAGAGTTCGTGTGCCTATACACCCCAACAAAATGGAGTGGCTGAAAGAAAAAACCGTCATCTTC
TAGAAGTTGCTCAATCTCTCATGCTGTCAACCTCTCTTCTGTCTTACCTATGGGGGGATGCAGTCTTGACTGCCGCCTATCTTATAAATCGGATGTCTTCTCGGGTTCTT
AACTTCCAAACTCCTCTTGACTACTTCAAACTCTCTTACCCTACCACTCGCCTTATACCTGATGTCCCTCTCCGTGTTTTTGGATGTACAATTTTTGTCGATAGCTTCGG
CCCCAACCAAACTAAATTTACCCCTCGTGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGGGTCCATCACGAATTACCACTTCTTCAGTTTTACACCACCATTGAAACTCAATTTAATGCCCAAATTGCAATCCTTCGAAGTGACAATGGTCGTGAATTCCT
CACCAATACTCTTCGTGAGTTTTTATCCATTAAAGGTATTATTCACCAGAGTTCGTGTGCCTATACACCCCAACAAAATGGAGTGGCTGAAAGAAAAAACCGTCATCTTC
TAGAAGTTGCTCAATCTCTCATGCTGTCAACCTCTCTTCTGTCTTACCTATGGGGGGATGCAGTCTTGACTGCCGCCTATCTTATAAATCGGATGTCTTCTCGGGTTCTT
AACTTCCAAACTCCTCTTGACTACTTCAAACTCTCTTACCCTACCACTCGCCTTATACCTGATGTCCCTCTCCGTGTTTTTGGATGTACAATTTTTGTCGATAGCTTCGG
CCCCAACCAAACTAAATTTACCCCTCGTGCCTAG
Protein sequenceShow/hide protein sequence
MSGVHHELPLLQFYTTIETQFNAQIAILRSDNGREFLTNTLREFLSIKGIIHQSSCAYTPQQNGVAERKNRHLLEVAQSLMLSTSLLSYLWGDAVLTAAYLINRMSSRVL
NFQTPLDYFKLSYPTTRLIPDVPLRVFGCTIFVDSFGPNQTKFTPRA