; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC10G190410 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC10G190410
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionribosome production factor 1-like
Genome locationCmU531Chr10:18025716..18032922
RNA-Seq ExpressionCmUC10G190410
SyntenyCmUC10G190410
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domainsIPR007109 - Brix domain
IPR044281 - U3 snoRNP protein/Ribosome production factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]2.9e-18097.58Show/hide
Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKRE
        MGEEKKN+GIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFS IIKR+
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKRE

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKD KGEKVPQQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF

XP_022155906.1 ribosome production factor 1-like [Momordica charantia]1.0e-17293.98Show/hide
Query:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKR
        MGEEKKN R IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFS IIKR
Subjt:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKR

Query:  EILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  EILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDF+FFRHHRYIF+SKENKKEADSK  SKD KGEKVPQQKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF

XP_022156150.1 ribosome production factor 1-like [Momordica charantia]7.7e-17394.28Show/hide
Query:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKR
        MGEEKKN R IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFS IIKR
Subjt:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKR

Query:  EILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  EILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIF+SKENKKEADSK  SKD KGEKVP+QKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]6.8e-17795.47Show/hide
Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKRE
        MGEEKKN+ I+PS IKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFS IIKR+
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKRE

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSK  KGEKVPQQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]3.8e-18097.28Show/hide
Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKRE
        MGEE KNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDET+CKPDDEELFAGNDADEFS IIKRE
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKRE

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL
        SHQPELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKD KGEKVPQQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF

TrEMBL top hitse value%identityAlignment
A0A0A0LH42 Brix domain-containing protein3.3e-17795.47Show/hide
Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKRE
        MGEEKKN+ I+PS IKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFS IIKR+
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKRE

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSK  KGEKVPQQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF

A0A1S3B854 ribosome production factor 1 isoform X11.4e-18097.58Show/hide
Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKRE
        MGEEKKN+GIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFS IIKR+
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKRE

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKD KGEKVPQQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF

A0A5A7UHC7 Ribosome production factor 1 isoform X11.4e-18097.58Show/hide
Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKRE
        MGEEKKN+GIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFS IIKR+
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKRE

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKD KGEKVPQQKV+ARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF

A0A6J1DPH5 ribosome production factor 1-like3.7e-17394.28Show/hide
Query:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKR
        MGEEKKN R IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFS IIKR
Subjt:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKR

Query:  EILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  EILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDFIFFRHHRYIF+SKENKKEADSK  SKD KGEKVP+QKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF

A0A6J1DT48 ribosome production factor 1-like4.9e-17393.98Show/hide
Query:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKR
        MGEEKKN R IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFS IIKR
Subjt:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKR

Query:  EILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  EILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV TFHNQRDF+FFRHHRYIF+SKENKKEADSK  SKD KGEKVPQQKV+ARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF

SwissProt top hitse value%identityAlignment
Q5R631 Ribosome production factor 13.6e-7247.22Show/hide
Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKREILPKVLIT
        G   S IKNKE+R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+    ++  PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKREILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T             +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P F GR+VATFHNQRD+IFFR HRYIF S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHKP-EMDTSRRRF
        FDSK GEYEWVHKP EMDTSRR+F
Subjt:  FDSKGGEYEWVHKP-EMDTSRRRF

Q6IQU6 Ribosome production factor 13.0e-7149.06Show/hide
Query:  SMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKREILPKVLITTCRF
        S IKNK++R  +   LK +K+ +KR   K +   E++AL+  ++ PP+++P+TIEN R  DET   P+DEE+      DEFS    R   PKVLITT   
Subjt:  SMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKREILPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELVLTNF
               F  +L +VIP+A+ Y R    LKK+I    ++ FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRK++K  G NPT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GRL  +LFP DP F GR+VATFHNQRDFIFFR HRYIF  K  KK                        +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHK-PEMDTSRRRF
         GEYEWVHK  EMD+SRR+F
Subjt:  GGEYEWVHK-PEMDTSRRRF

Q7TND5 Ribosome production factor 18.0e-7246.91Show/hide
Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKREILPKVLIT
        G   S IKNK++R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+    R+  PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKREILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T             +L +VIP++H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P F GR+VATFHNQRD+IFFR HRYIF+S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHKP-EMDTSRRRF
        FDSK GEYEWVHKP EMDTSRR+F
Subjt:  FDSKGGEYEWVHKP-EMDTSRRRF

Q8AVP1 Ribosome production factor 17.2e-7347.84Show/hide
Query:  SMIKNKEKRAEVHANLKNQKKLEK----RKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKREILPKVLIT
        S IKNK++R  +   LK +K+ EK    +KR K R+A       LG++ PP+ +P+TIEN R  DET   P DEE+      DEF+    ++  PK+LIT
Subjt:  SMIKNKEKRAEVHANLKNQKKLEK----RKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKREILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T          F  +L S+IPN+  Y R    LKKII    ++D+T L+V++  R+  +GL++  LP+GPTAHFKISNV LRK++K  G  PT H+PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SL+P DP+F GR+VATFHNQRD+IFFR+HRY+F+S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK-PEMDTSRRRF
        FDSK GEYEWVHK  EMDTSRR+F
Subjt:  FDSKGGEYEWVHK-PEMDTSRRRF

Q9H9Y2 Ribosome production factor 18.0e-7246.91Show/hide
Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKREILPKVLIT
        G   S IKNK++R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+    ++  PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKREILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T             +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P F GR+VATFHNQRD+IFFR HRYIF S++                           +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHKP-EMDTSRRRF
        FDSK GEYEWVHKP EMDTSRR+F
Subjt:  FDSKGGEYEWVHKP-EMDTSRRRF

Arabidopsis top hitse value%identityAlignment
AT1G63780.1 Ribosomal RNA processing Brix domain protein1.5e-3634.81Show/hide
Query:  KQALELGEELPP--RKIPRTIENTREV-DETVCKPD---DEELFAGNDADEFSCIIKREILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDL
        ++AL+ G+ +P   R +   +    ++ D+    P    D+E     +AD           PK+L+TT R  S     F  EL  V PN+    RG+  +
Subjt:  KQALELGEELPP--RKIPRTIENTREV-DETVCKPD---DEELFAGNDADEFSCIIKREILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDL

Query:  KKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV
         +IIE A + DFT +++VH  R   DGL+I  LP GPTA+F + NVV R DI   K+ G      P L+  NFTT++G RVG +++ +FP  P    +R+
Subjt:  KKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRV

Query:  ATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
         TF NQ D+I FR+H Y                    KGE  P+      L+E GPRF ++L  ++ GT +    E EWV +P M+TS++R F
Subjt:  ATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF

AT4G01560.1 Ribosomal RNA processing Brix domain protein5.1e-13873.94Show/hide
Query:  GEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKREI
        G EK+N  I+PSMIKNK+KR++V+A  K++KKLEK+K+ +ARDAAEK+ALELGEE P + IP+TIENTRE DETVC+PDDEELFA  DADEF+ +++REI
Subjt:  GEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKREI

Query:  LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTS
         PKVL+TTCRFNST GPA ISELLSVIPN+HY KRGT DLKKI+EYA  KDFTSL+VVHT+RR+ D LLIIGLP GPTAHFK+SN+VLRKDIKNHGNPTS
Subjt:  LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTS

Query:  HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLI
        HQPELVL NFTTRLG RVGR  QSLFP DPNFRGRRV TFHNQRDFIFFRHHRYIFE+KE+             K +K  ++ +  RLQECGPRFT+KL+
Subjt:  HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLI

Query:  SLQHGTFDSKGGEYEWVHKPEMDTSRRRFF
        +LQHGTFD+KGGE+EWVHKPEMDTSRRRFF
Subjt:  SLQHGTFDSKGGEYEWVHKPEMDTSRRRFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGATCAAACACTTCAATCCCTGCAGGGGAAACAAGGGAGTCATCTTGCAACTTAACCCCCGCCGCTAACCTCTCTTTCGCACAAGCTCTGTCCGCCGACCACAC
GACCGCCCCTCCGACGACCATCATCCAACTGCCATCGTCTACAGCCTCGTCGCCGAGGGACTCCGGCCCCAGCGCACCGCCCCATCAGCCCGCCTCACCCGTTCTCGCCG
TCGTCCGACGCCGGTGCTACAGTTTCAGAGTCTTAGTTTTGATGGGGGAGGAGAAGAAGAACAGGGGTATAATCCCATCAATGATAAAGAACAAAGAAAAGAGGGCAGAA
GTGCACGCCAACCTCAAGAACCAGAAGAAGCTTGAGAAACGCAAGAGGGCCAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAG
GAAGATTCCTCGCACCATTGAGAACACCAGGGAGGTTGATGAGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCTGGAAATGATGCTGATGAATTTAGTTGCATCA
TAAAGCGTGAGATTTTGCCGAAAGTTCTAATTACTACTTGTCGTTTTAATTCTACTATTGGACCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTAC
TACAAGAGAGGAACTAATGATTTGAAGAAGATTATAGAATATGCAAATGCCAAGGACTTTACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAATTGGATGGCCTTTT
AATTATTGGCTTACCTGAGGGACCTACTGCCCATTTTAAGATATCAAATGTTGTCTTACGTAAGGACATTAAGAATCATGGAAATCCAACCAGTCATCAGCCAGAGCTTG
TATTGACCAACTTCACAACACGCCTTGGACTTCGTGTTGGAAGATTGATACAATCACTATTCCCACAAGATCCTAATTTTCGCGGTCGACGGGTTGCAACTTTTCATAAC
CAACGGGATTTTATATTTTTTCGGCATCATCGATACATTTTTGAAAGCAAGGAAAATAAAAAAGAGGCCGACTCAAAAAAGAAGTCCAAGGATATGAAGGGTGAGAAAGT
TCCTCAGCAGAAAGTAGTTGCCCGTCTTCAGGAATGTGGTCCTCGTTTCACAATGAAATTGATCAGTTTGCAGCACGGAACTTTCGATTCAAAAGGCGGGGAGTATGAAT
GGGTTCATAAGCCTGAAATGGATACAAGCCGCAGAAGATTTTTCTTTTCTTTGGTTGTTATTTATATAAAATTTTGGATGGACCGCTTATCAAATTCGAATCTCCATTTC
TGCCTACATGTGAAGCAGATGAAGCATTCTGCCTTTGTCTGCTGTAAGGCAGAATGCCCAACCTTTCGACGGTTTTCTCTGAGCGTGAGGTTCTCAGAAAACATAAAATA
TTACATCGTGCAATTTTGTTCCCGTAGCCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGATCAAACACTTCAATCCCTGCAGGGGAAACAAGGGAGTCATCTTGCAACTTAACCCCCGCCGCTAACCTCTCTTTCGCACAAGCTCTGTCCGCCGACCACAC
GACCGCCCCTCCGACGACCATCATCCAACTGCCATCGTCTACAGCCTCGTCGCCGAGGGACTCCGGCCCCAGCGCACCGCCCCATCAGCCCGCCTCACCCGTTCTCGCCG
TCGTCCGACGCCGGTGCTACAGTTTCAGAGTCTTAGTTTTGATGGGGGAGGAGAAGAAGAACAGGGGTATAATCCCATCAATGATAAAGAACAAAGAAAAGAGGGCAGAA
GTGCACGCCAACCTCAAGAACCAGAAGAAGCTTGAGAAACGCAAGAGGGCCAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAG
GAAGATTCCTCGCACCATTGAGAACACCAGGGAGGTTGATGAGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCTGGAAATGATGCTGATGAATTTAGTTGCATCA
TAAAGCGTGAGATTTTGCCGAAAGTTCTAATTACTACTTGTCGTTTTAATTCTACTATTGGACCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTAC
TACAAGAGAGGAACTAATGATTTGAAGAAGATTATAGAATATGCAAATGCCAAGGACTTTACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAATTGGATGGCCTTTT
AATTATTGGCTTACCTGAGGGACCTACTGCCCATTTTAAGATATCAAATGTTGTCTTACGTAAGGACATTAAGAATCATGGAAATCCAACCAGTCATCAGCCAGAGCTTG
TATTGACCAACTTCACAACACGCCTTGGACTTCGTGTTGGAAGATTGATACAATCACTATTCCCACAAGATCCTAATTTTCGCGGTCGACGGGTTGCAACTTTTCATAAC
CAACGGGATTTTATATTTTTTCGGCATCATCGATACATTTTTGAAAGCAAGGAAAATAAAAAAGAGGCCGACTCAAAAAAGAAGTCCAAGGATATGAAGGGTGAGAAAGT
TCCTCAGCAGAAAGTAGTTGCCCGTCTTCAGGAATGTGGTCCTCGTTTCACAATGAAATTGATCAGTTTGCAGCACGGAACTTTCGATTCAAAAGGCGGGGAGTATGAAT
GGGTTCATAAGCCTGAAATGGATACAAGCCGCAGAAGATTTTTCTTTTCTTTGGTTGTTATTTATATAAAATTTTGGATGGACCGCTTATCAAATTCGAATCTCCATTTC
TGCCTACATGTGAAGCAGATGAAGCATTCTGCCTTTGTCTGCTGTAAGGCAGAATGCCCAACCTTTCGACGGTTTTCTCTGAGCGTGAGGTTCTCAGAAAACATAAAATA
TTACATCGTGCAATTTTGTTCCCGTAGCCACTAG
Protein sequenceShow/hide protein sequence
MKGSNTSIPAGETRESSCNLTPAANLSFAQALSADHTTAPPTTIIQLPSSTASSPRDSGPSAPPHQPASPVLAVVRRRCYSFRVLVLMGEEKKNRGIIPSMIKNKEKRAE
VHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSCIIKREILPKVLITTCRFNSTIGPAFISELLSVIPNAHY
YKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVATFHN
QRDFIFFRHHRYIFESKENKKEADSKKKSKDMKGEKVPQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFFSLVVIYIKFWMDRLSNSNLHF
CLHVKQMKHSAFVCCKAECPTFRRFSLSVRFSENIKYYIVQFCSRSH