; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC10G190510 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC10G190510
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Description50S ribosomal protein L29, chloroplastic-like
Genome locationCmU531Chr10:18325495..18328345
RNA-Seq ExpressionCmUC10G190510
SyntenyCmUC10G190510
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR036049 - Ribosomal protein L29/L35 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577307.1 50S ribosomal protein L29, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.4e-7392.86Show/hide
Query:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT
        M+NLSIASPS+V+IP+K L STSKSSFNGLQIRFPFSFRVPPK ACTGGRNSPVVMMAKREEELK+IRAKTTEEINEEVVDLKGELLMLRLQKSARNEF 
Subjt:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_022941582.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita moschata]2.0e-7293.45Show/hide
Query:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT
        MINLSIASPS+VS PSK L STSKSSFNG QIRFPFSFRVPPKTA TGGRNS VVMMAKREEELKEIR KTTEEINEEV+DLKGELLMLRLQKSARNEF 
Subjt:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_022985118.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita maxima]5.4e-7393.45Show/hide
Query:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT
        MINLSIASPS+V+IP+K L STSKSSFNGLQIRFPFSFRVPPK AC GGRNSPVVMMAKREEELK+IRAKTTEEINEEVVDLKGELLMLRLQKSARNEF 
Subjt:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_023531622.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita pepo subsp. pepo]3.5e-7293.45Show/hide
Query:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT
        MINLSIASPS+VS PSK L STSKSSFNG QIRFPFSFRVPPKTA TGGRNS VVMMAKREEELKEIR KTTEEINEEV+DLKGELLMLRLQKSARNEF 
Subjt:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_038903244.1 50S ribosomal protein L29, chloroplastic [Benincasa hispida]7.5e-7596.43Show/hide
Query:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT
        MINLSIASPSTVSIP KVL STSKSSFNGLQIRFPFSFRVPPKTACTGGRNS VVMMAKREEELKEIRAK+TEEI EEVVDLKGELLMLRLQKSARNEF 
Subjt:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

TrEMBL top hitse value%identityAlignment
A0A6J1C3N4 50S ribosomal protein L29, chloroplastic1.0e-6992.26Show/hide
Query:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT
        MINLSIASPSTVS+PS VL STSKSSF GLQIR PFS RV  KT C G RNS VVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEF 
Subjt:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1EMX4 50S ribosomal protein L29, chloroplastic-like7.1e-7192.07Show/hide
Query:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT
        M+NLSIASPS+V+IP+K L STSKSSFNGLQIRFPFS RVPPK ACTGGRNSPVVMMAKREEELK+IRAKTTEEINEEVVDLKGELLMLRLQKSARNEF 
Subjt:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEE AAE++
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEA

A0A6J1FMW5 50S ribosomal protein L29, chloroplastic-like9.9e-7393.45Show/hide
Query:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT
        MINLSIASPS+VS PSK L STSKSSFNG QIRFPFSFRVPPKTA TGGRNS VVMMAKREEELKEIR KTTEEINEEV+DLKGELLMLRLQKSARNEF 
Subjt:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1IQR3 50S ribosomal protein L29, chloroplastic-like2.2e-7292.86Show/hide
Query:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT
        M+NLSIASPS+VS PSK L STSKSSFNG QIRFPFSFRVPPKTA TGGRNS VVMMAKREEELKEIR KTTEEINEEV+DLKGELLMLRLQKSARNEF 
Subjt:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1JCM6 50S ribosomal protein L29, chloroplastic-like2.6e-7393.45Show/hide
Query:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT
        MINLSIASPS+V+IP+K L STSKSSFNGLQIRFPFSFRVPPK AC GGRNSPVVMMAKREEELK+IRAKTTEEINEEVVDLKGELLMLRLQKSARNEF 
Subjt:  MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFT

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

SwissProt top hitse value%identityAlignment
P82248 50S ribosomal protein L29, chloroplastic3.4e-3862.16Show/hide
Query:  SKSSFNGLQ---IRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFTSSEFRRMRKRIARMLTVKR
        +KSSF+GL+   +    S R+  +T       S VV+M K+E+ELKE+R KT E++NEE++ LKGEL MLRLQ+SAR  F  S+F RMRKR+ARMLTVKR
Subjt:  SKSSFNGLQ---IRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFTSSEFRRMRKRIARMLTVKR

Query:  EREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKS
        EREIE+GVGKRLSRKLD+ WK+SIVVRPPPSLKKL+E+  A  EAEK+
Subjt:  EREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKS

Q49ZG0 50S ribosomal protein L292.5e-0448.39Show/hide
Query:  KEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFTSSEFRRMRKRIARMLTVKREREIEEG
        KEIR  TT EI E++   K EL  LR Q +      ++  R +RK IAR+ TV REREIE+G
Subjt:  KEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFTSSEFRRMRKRIARMLTVKREREIEEG

Q4L8A6 50S ribosomal protein L295.5e-0449.18Show/hide
Query:  KEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFTSSEFRRMRKRIARMLTVKREREIEE
        KEIR  TT EI E++   K EL  LR Q +      ++  R +RK IAR+ TV REREIEE
Subjt:  KEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFTSSEFRRMRKRIARMLTVKREREIEE

Q9FJP3 50S ribosomal protein L29, chloroplastic5.2e-4766.07Show/hide
Query:  MINLSIASPSTVSIPSKVLYS--TSKSSFNGLQIRFPFSFRVPPKTACTGGRNSP-VVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARN
        M++LSIA+P T +I  +   S  ++ SSF+G++I+   S RVP     +     P VVMM+KRE ELKEIR+KTTE++ EEVVDLKGEL MLRLQKSARN
Subjt:  MINLSIASPSTVSIPSKVLYS--TSKSSFNGLQIRFPFSFRVPPKTACTGGRNSP-VVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARN

Query:  EFTSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE
        EF SS+FRRM+K++ARMLTVKREREI+EG+ KRLSRKLDR+WKKSIV RPPPSLKKL+EEEAA E AE
Subjt:  EFTSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE

Q9SWI6 50S ribosomal protein L29, chloroplastic2.7e-3575Show/hide
Query:  RNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFTSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPP
        R + +V MAKRE+EL+EIRA TTE++ EEVVDLKGEL +LRL++SAR EF +SEF RMRKRIARMLTVKREREIE+G+ KRLSRKLDRKWK+SIVVRPPP
Subjt:  RNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFTSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPP

Query:  SLKKLREE
        SL+  +EE
Subjt:  SLKKLREE

Arabidopsis top hitse value%identityAlignment
AT5G65220.1 Ribosomal L29 family protein3.7e-4866.07Show/hide
Query:  MINLSIASPSTVSIPSKVLYS--TSKSSFNGLQIRFPFSFRVPPKTACTGGRNSP-VVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARN
        M++LSIA+P T +I  +   S  ++ SSF+G++I+   S RVP     +     P VVMM+KRE ELKEIR+KTTE++ EEVVDLKGEL MLRLQKSARN
Subjt:  MINLSIASPSTVSIPSKVLYS--TSKSSFNGLQIRFPFSFRVPPKTACTGGRNSP-VVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARN

Query:  EFTSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE
        EF SS+FRRM+K++ARMLTVKREREI+EG+ KRLSRKLDR+WKKSIV RPPPSLKKL+EEEAA E AE
Subjt:  EFTSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAACCTTTCAATTGCTTCGCCTTCGACCGTTTCTATCCCTTCAAAAGTTCTCTACTCGACCTCCAAATCCTCCTTCAATGGCCTTCAAATCCGTTTCCCATTTTC
GTTTCGCGTTCCTCCTAAAACAGCATGTACTGGAGGTCGTAATTCCCCGGTGGTAATGATGGCGAAGAGGGAGGAGGAATTGAAGGAAATCAGAGCGAAAACTACTGAGG
AAATAAATGAAGAGGTCGTCGATCTTAAGGGTGAACTTCTTATGCTTCGGCTTCAAAAATCTGCCCGCAATGAGTTTACGTCTAGCGAATTCCGCCGCATGCGCAAACGG
ATTGCTCGGATGCTAACAGTAAAACGCGAAAGAGAGATTGAAGAGGGAGTGGGCAAAAGGCTGTCAAGAAAATTAGATAGAAAGTGGAAGAAAAGTATTGTTGTCAGACC
ACCTCCATCGCTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCTGAAGAAGCTGAGAAATCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
TAGAAGTGGCCGATAGCTTATCTTCTTCTTCAATAGCCCGCTGAGTTCTTCATCTTCTTCCTCAAGCGCTGTGGCTGAGCGAAACCACACTGTCCACAAACTCTGAAGAT
GATAAACCTTTCAATTGCTTCGCCTTCGACCGTTTCTATCCCTTCAAAAGTTCTCTACTCGACCTCCAAATCCTCCTTCAATGGCCTTCAAATCCGTTTCCCATTTTCGT
TTCGCGTTCCTCCTAAAACAGCATGTACTGGAGGTCGTAATTCCCCGGTGGTAATGATGGCGAAGAGGGAGGAGGAATTGAAGGAAATCAGAGCGAAAACTACTGAGGAA
ATAAATGAAGAGGTCGTCGATCTTAAGGGTGAACTTCTTATGCTTCGGCTTCAAAAATCTGCCCGCAATGAGTTTACGTCTAGCGAATTCCGCCGCATGCGCAAACGGAT
TGCTCGGATGCTAACAGTAAAACGCGAAAGAGAGATTGAAGAGGGAGTGGGCAAAAGGCTGTCAAGAAAATTAGATAGAAAGTGGAAGAAAAGTATTGTTGTCAGACCAC
CTCCATCGCTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCTGAAGAAGCTGAGAAATCTGCTTGATCCAATCTCAGATAAGCTCTCATCCAATGTTGTAGCTTTATGAGT
TTGAAGTTGTTGAGAATGCTATTTAAACAACTTTTTAGAAAATATTTTTTCTTTCTCTCTAAAAATTCTGATTCTTGTACTTAGCTTATGCACAAATGGAAATAGATTTC
GAGTGGATCATGTTGAATTCATATGCTTTCTGTTCCATTTCACAGGCTTTCAATTGATTTTAGGTTGAATTTAAGTTTGATCCCCAGACTCAAAGGTCTCTAATATATAA
CAGGTC
Protein sequenceShow/hide protein sequence
MINLSIASPSTVSIPSKVLYSTSKSSFNGLQIRFPFSFRVPPKTACTGGRNSPVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFTSSEFRRMRKR
IARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA