CuGenDBv2

Gene ID	CmUC10G191010
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	classical arabinogalactan protein 4
Genome location	CmU531Chr10:20098676..20099248
RNA-Seq Expression	CmUC10G191010
Synteny	CmUC10G191010
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8649311.1 hypothetical protein Csa_014808 [Cucumis sativus]

2.2e-54

78.98

Show/hide

Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP
        MASST+L++LT+A LLIS AA SP PSPAP+ ESP WKWTP+NEPPSSPPTAEPP T +SP SPT+SPP TPPELSPVP+S+AP  PP ANPP LSPTAP
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP

Query:  PPAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAI
        PPAVKSPSHAPSPAKTK PAPAPSK SP PAKAPKSS+AP SSPPSPNG MEPP PSVAPA  K+ N  GANRFAI
Subjt:  PPAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAI

KAG7014869.1 hypothetical protein SDJN02_22499, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.2e-50

72.63

Show/hide

Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP
        MAS  VL+V+T ALLLISAAA SP+PSPAPSPESP WKWTP+ E PSSPP  EPP          SP  +PPELSPVPSS  P  PP ANPP LSP A P
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP

Query:  PAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PAVKSP HAPSP+KTK PAPAPSKMSP PA+APKSS  P SSPP+PNG MEPP PSVAP APK  N G ANRFAIGGSVA GLM AALIA
Subjt:  PAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

XP_008462882.1 PREDICTED: classical arabinogalactan protein 4 [Cucumis melo]

1.7e-59

78.53

Show/hide

Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP
        MASST+L++LT+A LLISAAA SP PSPAPS ESP WKWTP N+PPSSPPTAEPP T +SP SPT+SPPATPPELSPVPSS++P  PP ANPP LSPTAP
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP

Query:  PPAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PPAV SPSHAPSPAKTK PAPAPSK+SP PAKAPKSS+AP SSPPSPNG MEPP PS APA  K+ N  GANRFAIGGS+A G MIAA IA
Subjt:  PPAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

XP_011654351.1 classical arabinogalactan protein 4 [Cucumis sativus]

8.5e-59

79.06

Show/hide

Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP
        MASST+L++LT+A LLIS AA SP PSPAP+ ESP WKWTP+NEPPSSPPTAEPP T +SP SPT+SPP TPPELSPVP+S+AP  PP ANPP LSPTAP
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP

Query:  PPAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PPAVKSPSHAPSPAKTK PAPAPSK SP PAKAPKSS+AP SSPPSPNG MEPP PSVAPA  K+ N  GANRFAIGGS+A GLMIAA IA
Subjt:  PPAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

XP_038877309.1 vegetative cell wall protein gp1-like [Benincasa hispida]

1.9e-66

85.79

Show/hide

Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP
        MASSTVL VLTVALLLISAAA SPVPSPAP PESPAWKWTP+NEPPSSPP AEPP  +SP SPT+SPPATPPE+SP+PSS+AP LPPKANPP LSPTA P
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP

Query:  PAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        P VKSPSHAPSPAKTK PAPAPSKMSP PAKAPKSS+APASSPPSPNG MEPPAPSVAPA  K+ N G ANRFAIGGSVAVGLMIAALIA
Subjt:  PAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L0Q7 Uncharacterized protein

4.1e-59

79.06

Show/hide

Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP
        MASST+L++LT+A LLIS AA SP PSPAP+ ESP WKWTP+NEPPSSPPTAEPP T +SP SPT+SPP TPPELSPVP+S+AP  PP ANPP LSPTAP
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP

Query:  PPAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PPAVKSPSHAPSPAKTK PAPAPSK SP PAKAPKSS+AP SSPPSPNG MEPP PSVAPA  K+ N  GANRFAIGGS+A GLMIAA IA
Subjt:  PPAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

A0A1S3CHW9 classical arabinogalactan protein 4

8.3e-60

78.53

Show/hide

Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP
        MASST+L++LT+A LLISAAA SP PSPAPS ESP WKWTP N+PPSSPPTAEPP T +SP SPT+SPPATPPELSPVPSS++P  PP ANPP LSPTAP
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP

Query:  PPAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PPAV SPSHAPSPAKTK PAPAPSK+SP PAKAPKSS+AP SSPPSPNG MEPP PS APA  K+ N  GANRFAIGGS+A G MIAA IA
Subjt:  PPAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

A0A5A7V3Q7 Classical arabinogalactan protein 4

8.3e-60

78.53

Show/hide

Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP
        MASST+L++LT+A LLISAAA SP PSPAPS ESP WKWTP N+PPSSPPTAEPP T +SP SPT+SPPATPPELSPVPSS++P  PP ANPP LSPTAP
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAP

Query:  PPAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PPAV SPSHAPSPAKTK PAPAPSK+SP PAKAPKSS+AP SSPPSPNG MEPP PS APA  K+ N  GANRFAIGGS+A G MIAA IA
Subjt:  PPAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

A0A6J1E3R0 extensin-like

5.0e-49

71.05

Show/hide

Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP
        MAS  VL+V+T ALLLISA+A SP+PSPAPSPESP WKWTP+ + PSSPP  EPP          SP  +PPELSPVPSS  P  PP ANPP LSP A P
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP

Query:  PAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PAVKSP HAPSP+KTK PAPAPSKMS  PA+APKSS AP SSPP+PNG MEPP PSVAP APK  N G ANRFAIGG+VA GLM AALIA
Subjt:  PAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

A0A6J1JCM0 extensin-like

1.1e-46

70.53

Show/hide

Query:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP
        MAS  VL+V+T ALLLISA+A SP+PS APSPES  WKWTP+ E PSSPP  EPP          SP  +PPELSPVPSS  P  P  ANPP LSP A P
Subjt:  MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPP

Query:  PAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA
        PAVKSP HAPSP+KTK PAPAPSKMSP PA+APKSS APASSPP+PNG MEPP PSVAP APK  N G ANRFAI  SVA GLM AALIA
Subjt:  PAVKSPSHAPSPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

SwissProt top hits

e value

%identity

Alignment

Q9FPQ6 Vegetative cell wall protein gp1

2.1e-04

41.03

Show/hide

Query:  SAAATSPVPSPAPSPESPAWKWTPNNEPPS-SPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTK
        S A  SP P P+P+P SPA    P+  PPS SPP    P+  SP+ P    PA P    PVP S +P +PP   PP+ +P +P P V      PSPA   
Subjt:  SAAATSPVPSPAPSPESPAWKWTPNNEPPS-SPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTK

Query:  PPAPAPSKMSP----------PPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAP
        PP+PAP   +P          PP+ AP S  +PA   PSP     P  PS AP +P
Subjt:  PPAPAPSKMSP----------PPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAP

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCTCCACCGTTCTGCATGTTCTCACGGTGGCGCTCTTGCTGATCTCCGCCGCTGCAACATCCCCAGTACCATCTCCAGCGCCGAGCCCCGAATCACCGGCGTG
GAAATGGACTCCCAATAACGAGCCACCATCCTCTCCACCGACGGCGGAACCGCCTACGGCGTCGTCCCCATCTTCCCCAACAATGTCTCCGCCGGCCACCCCACCGGAGC
TCAGCCCCGTTCCATCATCCCATGCACCGATTTTACCACCCAAGGCTAACCCACCCGCATTGTCGCCGACCGCTCCACCGCCGGCGGTGAAGAGCCCCAGTCATGCGCCA
TCCCCGGCAAAAACGAAACCACCGGCTCCGGCTCCGTCGAAAATGAGCCCACCACCGGCCAAGGCACCGAAATCTTCTCAAGCTCCGGCGAGTAGTCCCCCATCACCAAA
TGGAAGTATGGAGCCACCAGCGCCATCCGTAGCTCCGGCAGCGCCGAAGCAGAGTAACAGCGGCGGTGCAAACAGATTCGCCATTGGTGGGTCTGTTGCAGTTGGATTAA
TGATTGCGGCTTTAATCGCTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAP
SPAKTKPPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

CmUC10G191010 (gene) of Watermelon (USVL531) v1 genome