; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC10G191990 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC10G191990
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUBP-type domain-containing protein
Genome locationCmU531Chr10:22033151..22035510
RNA-Seq ExpressionCmUC10G191990
SyntenyCmUC10G191990
Gene Ontology termsGO:0009958 - positive gravitropism (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001607 - Zinc finger, UBP-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044348.1 histone deacetylase 6 [Cucumis melo var. makuwa]4.0e-6985.14Show/hide
Query:  MAKEAGSSSSN----PLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQST
        MA+EAGSSSS     PL++ +E+E EEELLYGA SGWV+ALTSCDHL SLSSDL HIPPP TPC++CQNPKENWLCLCCKDVFCSRFVNKHML H+EQST
Subjt:  MAKEAGSSSSN----PLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGE PPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

KAG6600290.1 Histone deacetylase 6, partial [Cucurbita argyrosperma subsp. sororia]4.9e-6784.72Show/hide
Query:  MAKEAGSSSSNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLA
        MA EAGSSSSNP   ++EEE  EE LYGAESGWVEALTSCDHL SL SDL HIPPPDT C EC+NPKENWLCLCCK+VFCSRFVNKHML H++QS H LA
Subjt:  MAKEAGSSSSNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLA

Query:  LSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        LSYSDLSVWCFSCDAYLDAQ+IQELRPVHEVAYILKFGEAPPFR
Subjt:  LSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

XP_004152271.1 histone deacetylase 6 [Cucumis sativus]2.1e-7087.67Show/hide
Query:  MAKEAGSSS--SNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHC
        MA++AGSSS  SNPL LI+E+E EEELLYGA SGWV+ALTSCDHL SLSSDL HIPPP TPC++CQNPKENW+CLCCKDVFCSRFVNKHML H+EQSTHC
Subjt:  MAKEAGSSS--SNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHC

Query:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
Subjt:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

XP_008454385.1 PREDICTED: histone deacetylase 6 [Cucumis melo]1.4e-6985.81Show/hide
Query:  MAKEAGSSSSN----PLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQST
        MA+EAGSSSS     PL++ +E+E EEELLYGA SGWV+ALTSCDHL SLSSDL HIPPP TPC++CQNPKENWLCLCCKDVFCSRFVNKHML H+EQST
Subjt:  MAKEAGSSSSN----PLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

XP_038904979.1 histone deacetylase 6 [Benincasa hispida]6.6e-7291.67Show/hide
Query:  MAKEAGSSSSNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLA
        MAKEAGSSSSNPL LILEEE EEELLYGAESGWVEALTSCDHL  LS DL HIPPPD PC+ECQNPKENWLCL CKDVFCSRFVNKHML H+EQ THCLA
Subjt:  MAKEAGSSSSNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLA

Query:  LSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        LSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
Subjt:  LSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

TrEMBL top hitse value%identityAlignment
A0A061E839 Regulator of Vps4 activity in the MVB pathway protein1.3e-6076.39Show/hide
Query:  MAKEAGSSSSNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLA
        MA +AG+SSS+ L +ILEEE + +L+YGAESGWVEA T CDHL SLSSDL HIP P+TPC  CQ+P ENWLCLCCKDV CSRFVNKHML H++Q+THC+A
Subjt:  MAKEAGSSSSNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLA

Query:  LSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        LSYSDLSVWCF+CD YLDAQVI++LRPVHE AYILKFGEAPP R
Subjt:  LSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

A0A0A0KT14 UBP-type domain-containing protein1.0e-7087.67Show/hide
Query:  MAKEAGSSS--SNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHC
        MA++AGSSS  SNPL LI+E+E EEELLYGA SGWV+ALTSCDHL SLSSDL HIPPP TPC++CQNPKENW+CLCCKDVFCSRFVNKHML H+EQSTHC
Subjt:  MAKEAGSSS--SNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHC

Query:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
Subjt:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

A0A1S3BZ94 histone deacetylase 66.7e-7085.81Show/hide
Query:  MAKEAGSSSSN----PLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQST
        MA+EAGSSSS     PL++ +E+E EEELLYGA SGWV+ALTSCDHL SLSSDL HIPPP TPC++CQNPKENWLCLCCKDVFCSRFVNKHML H+EQST
Subjt:  MAKEAGSSSSN----PLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

A0A5A7TNA2 Histone deacetylase 61.9e-6985.14Show/hide
Query:  MAKEAGSSSSN----PLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQST
        MA+EAGSSSS     PL++ +E+E EEELLYGA SGWV+ALTSCDHL SLSSDL HIPPP TPC++CQNPKENWLCLCCKDVFCSRFVNKHML H+EQST
Subjt:  MAKEAGSSSSN----PLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQST

Query:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGE PPFR
Subjt:  HCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

A0A6J1D695 histone deacetylase 61.1e-6483.33Show/hide
Query:  MAKEAGSSSSNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLA
        MA EAGSSSSN    I+EEE EE+ L+GAE+GWVEALT CDHL SLSSDL HIP PDT C+ECQNPKENWLCLCCK++ CSRFVNKHML H++QSTHCLA
Subjt:  MAKEAGSSSSNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLA

Query:  LSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR
        LSYSDLSVWCFSCDAYLDAQVIQELRPV+EVAYILKFGEAPPFR
Subjt:  LSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR

SwissProt top hitse value%identityAlignment
Q20296 Histone deacetylase 61.7e-1435.17Show/hide
Query:  AKEAGSSSSNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPD----TPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTH
        +  +GSSSS+            E++    +  V  L +C HL     ++  +PP      T C+ECQ   E W CL C    C RFVN+H + H   S+H
Subjt:  AKEAGSSSSNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPD----TPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTH

Query:  CLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP
         +ALS +DLSVWC+ CD+Y+       L      A+  KFGE  P
Subjt:  CLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP

Q54QE6 NAD-dependent deacetylase sir2A1.0e-1146.67Show/hide
Query:  TPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLALSYSDLSVWCFSCDAYL
        T C  C +  ENW+C+ C  V CSR VN H   HFE + H ++ S+SD S WC++CD Y+
Subjt:  TPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLALSYSDLSVWCFSCDAYL

Q9H0E7 Ubiquitin carboxyl-terminal hydrolase 442.3e-1133.33Show/hide
Query:  ALTSCDHL--VSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLALSYSDLSVWCFSCDAYL
        A+ +C H+  + L+ D + + P    C +C   +  W CL C  V C R++ +H L HF++S+H +AL  +++ V+C+ CD Y+
Subjt:  ALTSCDHL--VSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLALSYSDLSVWCFSCDAYL

Q9UBN7 Histone deacetylase 62.8e-1741.28Show/hide
Query:  VEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAY
        V  L  C HLV++            PC +C   +ENW+CL C  V+C R++N HML H   S H L LSY DLS WC+ C AY+  Q + +   V  +A+
Subjt:  VEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAY

Query:  ILKFGEAPP
          KFGE  P
Subjt:  ILKFGEAPP

Q9Z2V5 Histone deacetylase 61.8e-1635.42Show/hide
Query:  MAKEAGSSSSNPLLLI--LEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHC
        + + AG    N L+L     +   +++ Y      V  L+ C HL+++            PC  C   +ENW+CL C  V+CSR+VN HM+ H E S H 
Subjt:  MAKEAGSSSSNPLLLI--LEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHC

Query:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP
        L LS  DLS WC+ C AY+     ++L+ V   A+  KFGE  P
Subjt:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP

Arabidopsis top hitse value%identityAlignment
AT2G14830.1 Regulator of Vps4 activity in the MVB pathway protein2.2e-0950.79Show/hide
Query:  MAKEA--GSSSSNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCT
        MA++A   SSSS+P   + +E   ++ + GA SGWVEA  +CDHL +LS DL H+P PDTPC+
Subjt:  MAKEA--GSSSSNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCT

AT2G14830.2 Regulator of Vps4 activity in the MVB pathway protein1.5e-5365.97Show/hide
Query:  MAKEA--GSSSSNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHC
        MA++A   SSSS+P   + +E   ++ + GA SGWVEA  +CDHL +LS DL H+P PDTPC+ CQNP ENWLCLCCK+V CSRFVN+HML H +Q+ HC
Subjt:  MAKEA--GSSSSNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHC

Query:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP
        LALSYSDLSVWCF C+AYLDAQ+I +LRP+H+ AYILKFGEAPP
Subjt:  LALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGEAPP

AT2G26000.1 zinc finger (C3HC4-type RING finger) family protein1.0e-0631.75Show/hide
Query:  PPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLALSYSDLSVWCFSCDAYL
        P ++ C  CQ  +  W+C+ C  V C R+   H   H+E++ HC +L      VW ++ D Y+
Subjt:  PPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLALSYSDLSVWCFSCDAYL

AT2G26000.2 zinc finger (C3HC4-type RING finger) family protein1.0e-0631.75Show/hide
Query:  PPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLALSYSDLSVWCFSCDAYL
        P ++ C  CQ  +  W+C+ C  V C R+   H   H+E++ HC +L      VW ++ D Y+
Subjt:  PPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLALSYSDLSVWCFSCDAYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAGAAGCCGGCTCGTCCTCTTCCAACCCACTGCTACTCATACTCGAAGAAGAAGCTGAGGAAGAACTCTTGTACGGCGCCGAATCGGGATGGGTCGAGGCTCT
AACTTCTTGCGATCATCTCGTTTCCCTATCTTCCGACCTCACTCACATTCCGCCCCCTGATACTCCCTGCACCGAATGTCAGAATCCCAAGGAGAACTGGTTGTGCTTAT
GCTGTAAGGATGTCTTTTGTAGTCGTTTTGTGAATAAGCACATGCTTCATCATTTTGAGCAATCAACTCATTGCCTTGCACTCAGCTACAGTGATTTGTCGGTTTGGTGC
TTCTCCTGCGACGCATATTTAGATGCACAAGTGATTCAGGAATTACGACCAGTACACGAAGTTGCCTATATACTGAAATTTGGTGAGGCCCCGCCATTTCGATAG
mRNA sequenceShow/hide mRNA sequence
AAACTTTTGCACTTCTCTAATTAGACGCTGCAAAGTAGAAGGTTGTGGGTGTTAGTTTCATCTGTCTGTTCGTCAATGGCGAAAGAAGCCGGCTCGTCCTCTTCCAACCC
ACTGCTACTCATACTCGAAGAAGAAGCTGAGGAAGAACTCTTGTACGGCGCCGAATCGGGATGGGTCGAGGCTCTAACTTCTTGCGATCATCTCGTTTCCCTATCTTCCG
ACCTCACTCACATTCCGCCCCCTGATACTCCCTGCACCGAATGTCAGAATCCCAAGGAGAACTGGTTGTGCTTATGCTGTAAGGATGTCTTTTGTAGTCGTTTTGTGAAT
AAGCACATGCTTCATCATTTTGAGCAATCAACTCATTGCCTTGCACTCAGCTACAGTGATTTGTCGGTTTGGTGCTTCTCCTGCGACGCATATTTAGATGCACAAGTGAT
TCAGGAATTACGACCAGTACACGAAGTTGCCTATATACTGAAATTTGGTGAGGCCCCGCCATTTCGATAGAATTTATCATCCTGCGGGGGAACTGAAATATCAGATTATT
TAGTGTCATAACTTTTATAGTCTCTACATATTAGATGTCTTGATTTCTTGTTTTGTAGAATTGAGTAAATGTGTTCATTGTAAGTTGTTAACTTTAAAGAGTGAGGGATA
GATTAGAATCACCTATATTGTTAAAAAATTTTAGGAAGTTTTTACTTGAAGCTGACAAATCTTCTTATTACAAACCTTGATGATAACACTAATGAAATTGGTTCCCCATT
TTTGTCA
Protein sequenceShow/hide protein sequence
MAKEAGSSSSNPLLLILEEEAEEELLYGAESGWVEALTSCDHLVSLSSDLTHIPPPDTPCTECQNPKENWLCLCCKDVFCSRFVNKHMLHHFEQSTHCLALSYSDLSVWC
FSCDAYLDAQVIQELRPVHEVAYILKFGEAPPFR