; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC10G192960 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC10G192960
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionPMD domain-containing protein
Genome locationCmU531Chr10:23835291..23838186
RNA-Seq ExpressionCmUC10G192960
SyntenyCmUC10G192960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026036.1 uncharacterized protein E6C27_scaffold581G00210 [Cucumis melo var. makuwa]1.6e-1331.61Show/hide
Query:  KFPKKTGNDIGGKRIRMLETGGFTSGRIEESGSSDEDRQWKRTK-----------------NVSKFLDITTPVSPLDDHILDIGETSRSFVSPNGYDSA-
        KF  ++G D  GK I +L TG   S   E+S S+++DR  KR K                 +V++F DIT+ +S L DH+L I  TS+  VSP     + 
Subjt:  KFPKKTGNDIGGKRIRMLETGGFTSGRIEESGSSDEDRQWKRTK-----------------NVSKFLDITTPVSPLDDHILDIGETSRSFVSPNGYDSA-

Query:  -------FTRVGNFKALMDTLREGAQKTMSMTASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLYLEDETRKIFKKVLYDKSST
                T +     ++    +  +    +TASE  +FCA ++ISD +R  +  +WE++ +KI+ T F +V  LE E  KIF  ++   S++
Subjt:  -------FTRVGNFKALMDTLREGAQKTMSMTASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLYLEDETRKIFKKVLYDKSST

KAA0047641.1 uncharacterized protein E6C27_scaffold115G001240 [Cucumis melo var. makuwa]2.7e-1629.92Show/hide
Query:  SSSLAKPKFPKKTGNDIGGKRIRMLETGGFTSGRIEESGSSDEDRQWKRTK-----------------NVSKFLDITTPVSPLDDHILDIGETSRSFVSP
        S+  AK KFP ++G D   K + +L TG   S   E+S S+++DR WKR K                 +V +FLDIT+P+S L DH+L I  T++S  SP
Subjt:  SSSLAKPKFPKKTGNDIGGKRIRMLETGGFTSGRIEESGSSDEDRQWKRTK-----------------NVSKFLDITTPVSPLDDHILDIGETSRSFVSP

Query:  NGYDSAFTRVGNFKALMDTLREGAQKTMSMTASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLYLEDETRKIFKKVLYDKSSTFTKKNTLL
               +   N K  +D L                       + D RR     +WE++ +KI+CTPF + L L +         +  + +  + K   L
Subjt:  NGYDSAFTRVGNFKALMDTLREGAQKTMSMTASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLYLEDETRKIFKKVLYDKSSTFTKKNTLL

Query:  ECAVKALREEEELTTKLESDELLNQHKLEASKMREIISNIERSPALSDKGTKALEVLRRMLKAT
        E  +K +R E  +    E+   L Q + E SK  E I  +E +P + D   K L  LR  L+ T
Subjt:  ECAVKALREEEELTTKLESDELLNQHKLEASKMREIISNIERSPALSDKGTKALEVLRRMLKAT

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]3.0e-1525.3Show/hide
Query:  SLAKPKFPKKTGNDIGGKRIRMLETGG-----FTSGRIEESGSSDEDRQWKRTKNVSKF------------LDI--TTPVSPLDDHILDIGE--TSRSFV
        S ++P+ PK  G+++GGK IR++E              +ES +S  DR WKR    +K             L++    P+SPL+DH+  + E  + +S  
Subjt:  SLAKPKFPKKTGNDIGGKRIRMLETGG-----FTSGRIEESGSSDEDRQWKRTKNVSKF------------LDI--TTPVSPLDDHILDIGE--TSRSFV

Query:  SPNGYDSAFTRVGNFK--------------ALMDTLREG----AQKTM-------SMTASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLY
         P+  DSAF  VG  K              AL++ +R G     +KT+       +  + E   +    V+S+  +     MWE I  KIM TPF  +  
Subjt:  SPNGYDSAFTRVGNFK--------------ALMDTLREG----AQKTM-------SMTASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLY

Query:  LEDETRKIFKKV------------------------------LYDKSSTFTKKNTLLECAVKALREEEELTTKLESD-ELLNQHKLEASKMREIISNIER
        L  E   +F  +                               Y      T K   L     A+ E   L  +L  D + ++Q +LE +K+++ ++ +E 
Subjt:  LEDETRKIFKKV------------------------------LYDKSSTFTKKNTLLECAVKALREEEELTTKLESD-ELLNQHKLEASKMREIISNIER

Query:  SPALSDKGTKALEVLRRMLKATRQEPENYKWK
        +PA++++  +AL  +R+ ++A R+E +N+KW+
Subjt:  SPALSDKGTKALEVLRRMLKATRQEPENYKWK

KAA0057699.1 hypothetical protein E6C27_scaffold126G00510 [Cucumis melo var. makuwa]9.6e-1425Show/hide
Query:  HYKVPTDVRG--------------LLMVGFSGEDN---FSSSL---AKPKFPKKTGNDIGGKRIRMLETGG-----FTSGRIEESGSSDEDRQWKRTKNV
        HY +PT+VRG              +  + +  E+     SS++   ++P+ PK  G+++GGK IR++E          +   +ES SS  DR WKR    
Subjt:  HYKVPTDVRG--------------LLMVGFSGEDN---FSSSL---AKPKFPKKTGNDIGGKRIRMLETGG-----FTSGRIEESGSSDEDRQWKRTKNV

Query:  SK--------------FLDITTPVSPLDDHI--LDIGETSRSFVSPNGYDSAFTRVGNFKALMDTLREGAQKTMSMTASEAFYFCAVDVISDARRHVISA
        +K               +    P+SPL+DH+  L   ++  S + P+  DSAF  VG  K  ++   E + +  ++          ++ I   +  V   
Subjt:  SK--------------FLDITTPVSPLDDHI--LDIGETSRSFVSPNGYDSAFTRVGNFKALMDTLREGAQKTMSMTASEAFYFCAVDVISDARRHVISA

Query:  MWETIHKKIMCTPFHKVLYLEDETRKI-FKKVLYDKSSTFTKKNTLLECA---VKALREEEELTTKLESDELLNQHKLEASKMREIISNIERSPALSDKG
          E+   K    P   +  +      + F ++  DK+    +K + ++ A   VK LR + +L  K    + ++Q +LE +K+++ ++ +E +PA++++ 
Subjt:  MWETIHKKIMCTPFHKVLYLEDETRKI-FKKVLYDKSSTFTKKNTLLECA---VKALREEEELTTKLESDELLNQHKLEASKMREIISNIERSPALSDKG

Query:  TKALEVLRRMLKATRQEPENYKWK
         +AL  +R+ ++ATR+E +N+KWK
Subjt:  TKALEVLRRMLKATRQEPENYKWK

TYK22840.1 uncharacterized protein E5676_scaffold115G00220 [Cucumis melo var. makuwa]5.6e-1433.16Show/hide
Query:  KFPKKTGNDIGGKRIRMLETGGFTSGRIEESGSSDEDRQWKRTK-----------------NVSKFLDITTPVSPLDDHILDIGETSRSFVSPNGYD-SA
        KF  ++G D  GK I +L TG   S   E+S S+++DR  KR K                 +V++F DIT+ +S L DH+L I  TS+  VSP     S 
Subjt:  KFPKKTGNDIGGKRIRMLETGGFTSGRIEESGSSDEDRQWKRTK-----------------NVSKFLDITTPVSPLDDHILDIGETSRSFVSPNGYD-SA

Query:  FTRVGNFKALMDT----LREGAQKTMSM---TASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLYLEDETRKIFKKVLYDKSST
         +++      M T    ++   Q+   +   TASE  +FCA ++ISD +R  +  +WE++ +KI+ T F +V  LE E  KIF  ++   S++
Subjt:  FTRVGNFKALMDT----LREGAQKTMSM---TASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLYLEDETRKIFKKVLYDKSST

TrEMBL top hitse value%identityAlignment
A0A5A7SJR1 Uncharacterized protein7.9e-1431.61Show/hide
Query:  KFPKKTGNDIGGKRIRMLETGGFTSGRIEESGSSDEDRQWKRTK-----------------NVSKFLDITTPVSPLDDHILDIGETSRSFVSPNGYDSA-
        KF  ++G D  GK I +L TG   S   E+S S+++DR  KR K                 +V++F DIT+ +S L DH+L I  TS+  VSP     + 
Subjt:  KFPKKTGNDIGGKRIRMLETGGFTSGRIEESGSSDEDRQWKRTK-----------------NVSKFLDITTPVSPLDDHILDIGETSRSFVSPNGYDSA-

Query:  -------FTRVGNFKALMDTLREGAQKTMSMTASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLYLEDETRKIFKKVLYDKSST
                T +     ++    +  +    +TASE  +FCA ++ISD +R  +  +WE++ +KI+ T F +V  LE E  KIF  ++   S++
Subjt:  -------FTRVGNFKALMDTLREGAQKTMSMTASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLYLEDETRKIFKKVLYDKSST

A0A5A7U231 Uncharacterized protein1.3e-1629.92Show/hide
Query:  SSSLAKPKFPKKTGNDIGGKRIRMLETGGFTSGRIEESGSSDEDRQWKRTK-----------------NVSKFLDITTPVSPLDDHILDIGETSRSFVSP
        S+  AK KFP ++G D   K + +L TG   S   E+S S+++DR WKR K                 +V +FLDIT+P+S L DH+L I  T++S  SP
Subjt:  SSSLAKPKFPKKTGNDIGGKRIRMLETGGFTSGRIEESGSSDEDRQWKRTK-----------------NVSKFLDITTPVSPLDDHILDIGETSRSFVSP

Query:  NGYDSAFTRVGNFKALMDTLREGAQKTMSMTASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLYLEDETRKIFKKVLYDKSSTFTKKNTLL
               +   N K  +D L                       + D RR     +WE++ +KI+CTPF + L L +         +  + +  + K   L
Subjt:  NGYDSAFTRVGNFKALMDTLREGAQKTMSMTASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLYLEDETRKIFKKVLYDKSSTFTKKNTLL

Query:  ECAVKALREEEELTTKLESDELLNQHKLEASKMREIISNIERSPALSDKGTKALEVLRRMLKAT
        E  +K +R E  +    E+   L Q + E SK  E I  +E +P + D   K L  LR  L+ T
Subjt:  ECAVKALREEEELTTKLESDELLNQHKLEASKMREIISNIERSPALSDKGTKALEVLRRMLKAT

A0A5A7U8L3 PMD domain-containing protein1.4e-1525.3Show/hide
Query:  SLAKPKFPKKTGNDIGGKRIRMLETGG-----FTSGRIEESGSSDEDRQWKRTKNVSKF------------LDI--TTPVSPLDDHILDIGE--TSRSFV
        S ++P+ PK  G+++GGK IR++E              +ES +S  DR WKR    +K             L++    P+SPL+DH+  + E  + +S  
Subjt:  SLAKPKFPKKTGNDIGGKRIRMLETGG-----FTSGRIEESGSSDEDRQWKRTKNVSKF------------LDI--TTPVSPLDDHILDIGE--TSRSFV

Query:  SPNGYDSAFTRVGNFK--------------ALMDTLREG----AQKTM-------SMTASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLY
         P+  DSAF  VG  K              AL++ +R G     +KT+       +  + E   +    V+S+  +     MWE I  KIM TPF  +  
Subjt:  SPNGYDSAFTRVGNFK--------------ALMDTLREG----AQKTM-------SMTASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLY

Query:  LEDETRKIFKKV------------------------------LYDKSSTFTKKNTLLECAVKALREEEELTTKLESD-ELLNQHKLEASKMREIISNIER
        L  E   +F  +                               Y      T K   L     A+ E   L  +L  D + ++Q +LE +K+++ ++ +E 
Subjt:  LEDETRKIFKKV------------------------------LYDKSSTFTKKNTLLECAVKALREEEELTTKLESD-ELLNQHKLEASKMREIISNIER

Query:  SPALSDKGTKALEVLRRMLKATRQEPENYKWK
        +PA++++  +AL  +R+ ++A R+E +N+KW+
Subjt:  SPALSDKGTKALEVLRRMLKATRQEPENYKWK

A0A5A7UVX0 PMD domain-containing protein4.6e-1425Show/hide
Query:  HYKVPTDVRG--------------LLMVGFSGEDN---FSSSL---AKPKFPKKTGNDIGGKRIRMLETGG-----FTSGRIEESGSSDEDRQWKRTKNV
        HY +PT+VRG              +  + +  E+     SS++   ++P+ PK  G+++GGK IR++E          +   +ES SS  DR WKR    
Subjt:  HYKVPTDVRG--------------LLMVGFSGEDN---FSSSL---AKPKFPKKTGNDIGGKRIRMLETGG-----FTSGRIEESGSSDEDRQWKRTKNV

Query:  SK--------------FLDITTPVSPLDDHI--LDIGETSRSFVSPNGYDSAFTRVGNFKALMDTLREGAQKTMSMTASEAFYFCAVDVISDARRHVISA
        +K               +    P+SPL+DH+  L   ++  S + P+  DSAF  VG  K  ++   E + +  ++          ++ I   +  V   
Subjt:  SK--------------FLDITTPVSPLDDHI--LDIGETSRSFVSPNGYDSAFTRVGNFKALMDTLREGAQKTMSMTASEAFYFCAVDVISDARRHVISA

Query:  MWETIHKKIMCTPFHKVLYLEDETRKI-FKKVLYDKSSTFTKKNTLLECA---VKALREEEELTTKLESDELLNQHKLEASKMREIISNIERSPALSDKG
          E+   K    P   +  +      + F ++  DK+    +K + ++ A   VK LR + +L  K    + ++Q +LE +K+++ ++ +E +PA++++ 
Subjt:  MWETIHKKIMCTPFHKVLYLEDETRKI-FKKVLYDKSSTFTKKNTLLECA---VKALREEEELTTKLESDELLNQHKLEASKMREIISNIERSPALSDKG

Query:  TKALEVLRRMLKATRQEPENYKWK
         +AL  +R+ ++ATR+E +N+KWK
Subjt:  TKALEVLRRMLKATRQEPENYKWK

A0A5D3DHK0 Uncharacterized protein2.7e-1433.16Show/hide
Query:  KFPKKTGNDIGGKRIRMLETGGFTSGRIEESGSSDEDRQWKRTK-----------------NVSKFLDITTPVSPLDDHILDIGETSRSFVSPNGYD-SA
        KF  ++G D  GK I +L TG   S   E+S S+++DR  KR K                 +V++F DIT+ +S L DH+L I  TS+  VSP     S 
Subjt:  KFPKKTGNDIGGKRIRMLETGGFTSGRIEESGSSDEDRQWKRTK-----------------NVSKFLDITTPVSPLDDHILDIGETSRSFVSPNGYD-SA

Query:  FTRVGNFKALMDT----LREGAQKTMSM---TASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLYLEDETRKIFKKVLYDKSST
         +++      M T    ++   Q+   +   TASE  +FCA ++ISD +R  +  +WE++ +KI+ T F +V  LE E  KIF  ++   S++
Subjt:  FTRVGNFKALMDT----LREGAQKTMSM---TASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLYLEDETRKIFKKVLYDKSST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTATAAAGTTCCCACCGATGTCAGGGGCTTGCTGATGGTTGGATTTTCTGGCGAAGATAACTTCTCTTCTTCTCTTGCCAAACCTAAATTTCCCAAGAAGACAGG
AAATGACATTGGAGGCAAACGAATTCGCATGCTTGAAACTGGTGGGTTTACCTCTGGGCGTATTGAAGAAAGTGGAAGTAGCGATGAAGACCGTCAATGGAAGAGAACCA
AGAATGTTTCGAAGTTTCTTGATATCACCACTCCCGTGTCACCTTTAGATGATCACATCCTAGACATTGGAGAAACATCGAGATCTTTTGTGAGTCCAAATGGTTATGAT
TCTGCATTCACTCGTGTTGGCAACTTTAAAGCACTAATGGACACACTTAGGGAGGGGGCACAAAAGACAATGTCCATGACTGCTTCTGAGGCTTTCTATTTTTGTGCTGT
CGACGTAATTTCTGATGCTCGACGTCATGTTATTTCAGCCATGTGGGAGACTATACATAAGAAAATTATGTGTACTCCTTTTCATAAAGTTCTTTACCTTGAAGATGAAA
CTCGTAAGATATTTAAGAAGGTACTATATGATAAAAGTAGCACATTTACCAAGAAGAATACACTTTTGGAGTGTGCTGTAAAGGCATTGCGGGAAGAGGAAGAATTGACA
ACCAAGCTAGAAAGTGATGAACTTTTGAATCAACATAAACTCGAAGCTTCTAAAATGCGGGAGATTATAAGTAATATTGAAAGATCTCCTGCACTAAGTGATAAAGGCAC
CAAAGCTTTAGAGGTACTTCGTAGAATGTTAAAGGCAACGCGACAGGAACCAGAGAACTACAAATGGAAGGACAACTTCTACTCTGTAAACCAAAGAATATGGCGTAACT
CTTGTGGGAGTGCGATGAGTAGTTTGTCCATTTGTTATGGCATTGTACATAAAAGACTTGTACTATTTGAAGTTAAACTTCTCGCACAACTTGCTCATCAGACTGTTGGC
GAATTGTCTTCCATTATCTGTCATAATACAATGAGAAATCTTAAGTGTCATCCCGATGACCTAGATGTTATTGGTCCAACCAGATTGAGCCCCCAAGCTTTAAATGGCCA
TGAAGTCACTATCAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCATTATAAAGTTCCCACCGATGTCAGGGGCTTGCTGATGGTTGGATTTTCTGGCGAAGATAACTTCTCTTCTTCTCTTGCCAAACCTAAATTTCCCAAGAAGACAGG
AAATGACATTGGAGGCAAACGAATTCGCATGCTTGAAACTGGTGGGTTTACCTCTGGGCGTATTGAAGAAAGTGGAAGTAGCGATGAAGACCGTCAATGGAAGAGAACCA
AGAATGTTTCGAAGTTTCTTGATATCACCACTCCCGTGTCACCTTTAGATGATCACATCCTAGACATTGGAGAAACATCGAGATCTTTTGTGAGTCCAAATGGTTATGAT
TCTGCATTCACTCGTGTTGGCAACTTTAAAGCACTAATGGACACACTTAGGGAGGGGGCACAAAAGACAATGTCCATGACTGCTTCTGAGGCTTTCTATTTTTGTGCTGT
CGACGTAATTTCTGATGCTCGACGTCATGTTATTTCAGCCATGTGGGAGACTATACATAAGAAAATTATGTGTACTCCTTTTCATAAAGTTCTTTACCTTGAAGATGAAA
CTCGTAAGATATTTAAGAAGGTACTATATGATAAAAGTAGCACATTTACCAAGAAGAATACACTTTTGGAGTGTGCTGTAAAGGCATTGCGGGAAGAGGAAGAATTGACA
ACCAAGCTAGAAAGTGATGAACTTTTGAATCAACATAAACTCGAAGCTTCTAAAATGCGGGAGATTATAAGTAATATTGAAAGATCTCCTGCACTAAGTGATAAAGGCAC
CAAAGCTTTAGAGGTACTTCGTAGAATGTTAAAGGCAACGCGACAGGAACCAGAGAACTACAAATGGAAGGACAACTTCTACTCTGTAAACCAAAGAATATGGCGTAACT
CTTGTGGGAGTGCGATGAGTAGTTTGTCCATTTGTTATGGCATTGTACATAAAAGACTTGTACTATTTGAAGTTAAACTTCTCGCACAACTTGCTCATCAGACTGTTGGC
GAATTGTCTTCCATTATCTGTCATAATACAATGAGAAATCTTAAGTGTCATCCCGATGACCTAGATGTTATTGGTCCAACCAGATTGAGCCCCCAAGCTTTAAATGGCCA
TGAAGTCACTATCAGATGA
Protein sequenceShow/hide protein sequence
MHYKVPTDVRGLLMVGFSGEDNFSSSLAKPKFPKKTGNDIGGKRIRMLETGGFTSGRIEESGSSDEDRQWKRTKNVSKFLDITTPVSPLDDHILDIGETSRSFVSPNGYD
SAFTRVGNFKALMDTLREGAQKTMSMTASEAFYFCAVDVISDARRHVISAMWETIHKKIMCTPFHKVLYLEDETRKIFKKVLYDKSSTFTKKNTLLECAVKALREEEELT
TKLESDELLNQHKLEASKMREIISNIERSPALSDKGTKALEVLRRMLKATRQEPENYKWKDNFYSVNQRIWRNSCGSAMSSLSICYGIVHKRLVLFEVKLLAQLAHQTVG
ELSSIICHNTMRNLKCHPDDLDVIGPTRLSPQALNGHEVTIR