; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC10G193350 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC10G193350
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Description60S ribosomal protein L44
Genome locationCmU531Chr10:24446955..24449106
RNA-Seq ExpressionCmUC10G193350
SyntenyCmUC10G193350
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004497 - monooxygenase activity (molecular function)
GO:0005506 - iron ion binding (molecular function)
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR000552 - Ribosomal protein L44e
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6383768.1 hypothetical protein SASPL_156461 [Salvia splendens]4.6e-4185.44Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK---LIHFPPLTKMQ
        +VNVPKTKKTYCKSKEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK   L+H   L  + 
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK---LIHFPPLTKMQ

Query:  ALR
          R
Subjt:  ALR

KAG8080729.1 hypothetical protein GUJ93_ZPchr0007g5290 [Zizania palustris]2.7e-4166.67Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKL------------I
        +VNVPKTKKTYCK+KECRKHTLHKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVL+LQCQ CKH SQH IK+            +
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKL------------I

Query:  HFP---------------PLTKMQALRNWWRQEGKGNFSFL
        H P                L ++QALRN  RQEG+GN + L
Subjt:  HFP---------------PLTKMQALRNWWRQEGKGNFSFL

KJB31844.1 hypothetical protein B456_005G210700 [Gossypium raimondii]3.5e-4172.44Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLIHFPPLTKMQALR
        +VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK+           LR
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLIHFPPLTKMQALR

Query:  NWWRQEGKGNFSFLDPLSVFIFCHFFF
            + GK +  F   +   + C  +F
Subjt:  NWWRQEGKGNFSFLDPLSVFIFCHFFF

PHU17227.1 60S ribosomal protein L44 [Capsicum chinense]4.1e-4287.13Show/hide
Query:  VFYIYDFFHDLFCLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKL
        +FY+        CLVNVPKTKKTYCKSKEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK+
Subjt:  VFYIYDFFHDLFCLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKL

Query:  I
        +
Subjt:  I

XP_028113736.1 60S ribosomal protein L44-like [Camellia sinensis]4.6e-4198.85Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKL
        LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK+
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKL

TrEMBL top hitse value%identityAlignment
A0A059BG29 Uncharacterized protein2.9e-4195.56Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLIHF
        +VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK+  F
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLIHF

A0A0D2RJ15 Uncharacterized protein1.7e-4172.44Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLIHFPPLTKMQALR
        +VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK+           LR
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLIHFPPLTKMQALR

Query:  NWWRQEGKGNFSFLDPLSVFIFCHFFF
            + GK +  F   +   + C  +F
Subjt:  NWWRQEGKGNFSFLDPLSVFIFCHFFF

A0A0D2U3F8 Uncharacterized protein2.9e-4195.56Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLIHF
        +VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK+  F
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKLIHF

A0A2G3CET5 60S ribosomal protein L442.0e-4287.13Show/hide
Query:  VFYIYDFFHDLFCLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKL
        +FY+        CLVNVPKTKKTYCKSKEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK+
Subjt:  VFYIYDFFHDLFCLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKL

Query:  I
        +
Subjt:  I

A0A7J7CV40 60S ribosomal protein L44-like2.9e-4195.56Show/hide
Query:  DLFCLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +L  +VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
Subjt:  DLFCLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

SwissProt top hitse value%identityAlignment
O23290 60S ribosomal protein L36a5.2e-4090.7Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIK
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

O59870 60S ribosomal protein L442.8e-3377.91Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VNVPKT++TYCK K C+KHT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK+  Q  +K
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

P0CQ50 60S ribosomal protein L442.1e-3379.07Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VN+PKT++TYCK K CRKHT HKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK   Q  +K
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

P0CQ51 60S ribosomal protein L442.1e-3379.07Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VN+PKT++TYCK K CRKHT HKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK   Q  +K
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

Q96499 60S ribosomal protein L441.3e-4398.84Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

Arabidopsis top hitse value%identityAlignment
AT3G23390.1 Zinc-binding ribosomal protein family protein3.7e-4190.7Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIK
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

AT4G14320.1 Zinc-binding ribosomal protein family protein3.7e-4190.7Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIK
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK

AT4G14320.2 Zinc-binding ribosomal protein family protein3.7e-4190.7Show/hide
Query:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK
        +VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIK
Subjt:  LVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACTCCTTCTTCACCCTTTTCCATTTTCTGCAATTTTAATGTCTCTTATTTCTTCTCAAGAGTCCCTCATGGGTGTACTTGTGTTCTACATCTATGATTTCTTTCA
CGATTTGTTCTGTTTGGTGAACGTTCCCAAGACAAAGAAGACTTATTGCAAGAGCAAGGAGTGCAGAAAGCACACCTTGCACAAGGTTACACAATATAAGAAGGGAAAGG
ATAGTCTTGCTGCACAGGGTAAGCGTCGGTACGATCGCAAGCAATCAGGATATGGAGGTCAGACCAAGCCTGTGTTTCACAAGAAGGCAAAAACTACCAAGAAGATTGTG
TTGAGGCTGCAATGCCAAGGGTGCAAACATGTATCCCAGCACCCAATCAAGCTAATCCATTTCCCTCCCCTTACAAAGATGCAAGCACTTCGAAATTGGTGGAGACAAGA
AGGGAAAGGGAACTTCTCTTTTCTAGACCCTTTGTCAGTTTTTATCTTTTGTCATTTCTTTTTCACAAGATTATTTGTTATTGGAGTTCTTGCACCATTACTCTGTGTTC
AGCAATTAGTTCTACGTGCTTCCTTTCTCATAGAAACTTGTCTGCATGAGGAATCGGTCAGTAATAGAATTAATCGATTGATTATTGTTAGATTCGTGAAAATTGTCTTC
CAACTATTTCACGATAACGCAGATGAGGTACATATTTTGAGATCAAGGTTATTGTATTCTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTACTCCTTCTTCACCCTTTTCCATTTTCTGCAATTTTAATGTCTCTTATTTCTTCTCAAGAGTCCCTCATGGGTGTACTTGTGTTCTACATCTATGATTTCTTTCA
CGATTTGTTCTGTTTGGTGAACGTTCCCAAGACAAAGAAGACTTATTGCAAGAGCAAGGAGTGCAGAAAGCACACCTTGCACAAGGTTACACAATATAAGAAGGGAAAGG
ATAGTCTTGCTGCACAGGGTAAGCGTCGGTACGATCGCAAGCAATCAGGATATGGAGGTCAGACCAAGCCTGTGTTTCACAAGAAGGCAAAAACTACCAAGAAGATTGTG
TTGAGGCTGCAATGCCAAGGGTGCAAACATGTATCCCAGCACCCAATCAAGCTAATCCATTTCCCTCCCCTTACAAAGATGCAAGCACTTCGAAATTGGTGGAGACAAGA
AGGGAAAGGGAACTTCTCTTTTCTAGACCCTTTGTCAGTTTTTATCTTTTGTCATTTCTTTTTCACAAGATTATTTGTTATTGGAGTTCTTGCACCATTACTCTGTGTTC
AGCAATTAGTTCTACGTGCTTCCTTTCTCATAGAAACTTGTCTGCATGAGGAATCGGTCAGTAATAGAATTAATCGATTGATTATTGTTAGATTCGTGAAAATTGTCTTC
CAACTATTTCACGATAACGCAGATGAGGTACATATTTTGAGATCAAGGTTATTGTATTCTGTCTGA
Protein sequenceShow/hide protein sequence
MVLLLHPFPFSAILMSLISSQESLMGVLVFYIYDFFHDLFCLVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIV
LRLQCQGCKHVSQHPIKLIHFPPLTKMQALRNWWRQEGKGNFSFLDPLSVFIFCHFFFTRLFVIGVLAPLLCVQQLVLRASFLIETCLHEESVSNRINRLIIVRFVKIVF
QLFHDNADEVHILRSRLLYSV