; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC10G195110 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC10G195110
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionheterogeneous nuclear ribonucleoprotein 1
Genome locationCmU531Chr10:26552201..26555074
RNA-Seq ExpressionCmUC10G195110
SyntenyCmUC10G195110
Gene Ontology termsGO:0006378 - mRNA polyadenylation (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0048576 - positive regulation of short-day photoperiodism, flowering (biological process)
GO:0048578 - positive regulation of long-day photoperiodism, flowering (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003730 - mRNA 3'-UTR binding (molecular function)
GO:0097157 - pre-mRNA intronic binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581052.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]2.7e-19177.08Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK
        AGSQ                                                                                           VEIKK
Subjt:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK

Query:  AEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDF
        AEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGA FSRGYDF
Subjt:  AEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDF

Query:  RGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR---------GGGGGYDGTGSAPSGRYHPYGR
        RGGYGGPDESYGAYNSS APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR         GGGGGYDG GSAPSGRYHPYGR
Subjt:  RGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR---------GGGGGYDGTGSAPSGRYHPYGR

XP_016903287.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo]3.6e-19178.39Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPND ATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK
        AGSQ                                                                                           VEIKK
Subjt:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK

Query:  AEPKKANPPPAPSKRYHDSRPSYSGAY-GDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD
        AEPKKANPPPAPSKRYH+SRPSYSGAY GDAYGEFGGGGYGG FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYGASFSRGYD
Subjt:  AEPKKANPPPAPSKRYHDSRPSYSGAY-GDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD

Query:  FRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGYDGTGSAPSGRYHPYGR
        FRGGYGGPDESYGAYNS GAPNTGGYA SYDMG+GTGY AGGRGSFYGSRGGGGGYDG GSAPSGRYHPYGR
Subjt:  FRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGYDGTGSAPSGRYHPYGR

XP_022934343.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita moschata]3.6e-19176.92Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK
        AGSQ                                                                                           VEIKK
Subjt:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK

Query:  AEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDF
        AEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGA FSRGYDF
Subjt:  AEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDF

Query:  RGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR----------GGGGGYDGTGSAPSGRYHPYGR
        RGGYGGPDESYGAYNSS APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR          GGGGGYDG GSAPSGRYHPYGR
Subjt:  RGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR----------GGGGGYDGTGSAPSGRYHPYGR

XP_022982535.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita maxima]4.7e-19177.04Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK
        AGSQ                                                                                           VEIKK
Subjt:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK

Query:  AEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDF
        AEPKK+NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGA FSRGYDF
Subjt:  AEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDF

Query:  RGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGYDGTGSAPSGRYHPYGR
        RGGYGGPDESYGAYNSS APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR        GGGGGYDG GSAPSGRYHPYGR
Subjt:  RGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGYDGTGSAPSGRYHPYGR

XP_023528997.1 LOW QUALITY PROTEIN: nuclear pore complex protein GP210 [Cucurbita pepo subsp. pepo]2.1e-19177.24Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK
        AGSQ                                                                                           VEIKK
Subjt:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK

Query:  AEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDF
        AEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGA FSRGYDF
Subjt:  AEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDF

Query:  RGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGYDGTGSAPSGRYHPYGR
        RGGYGGPDESYGAYNSS APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR        GGGGGYDG GSAPSGRYHPYGR
Subjt:  RGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGYDGTGSAPSGRYHPYGR

TrEMBL top hitse value%identityAlignment
A0A0A0LG75 Uncharacterized protein3.9e-19177.64Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPND ATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK
        AGSQ                                                                                           VEIKK
Subjt:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK

Query:  AEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDF
        AEPKKANPPPAPSKR+HDSRPSYSGAYGDAYGEFGGGGYGG FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYGASFSRGYDF
Subjt:  AEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDF

Query:  RGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR---GGGGGYDGTGSAPSGRYHPYGR
        RGGYGGPDESYGAYNS GAP+TGGYAGSYDMG+GTGY AGGRGSFYGSR   GGGGGYDG GSAPSGRYHPYGR
Subjt:  RGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR---GGGGGYDGTGSAPSGRYHPYGR

A0A1S4E4Y8 heterogeneous nuclear ribonucleoprotein 11.7e-19178.39Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPND ATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK
        AGSQ                                                                                           VEIKK
Subjt:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK

Query:  AEPKKANPPPAPSKRYHDSRPSYSGAY-GDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD
        AEPKKANPPPAPSKRYH+SRPSYSGAY GDAYGEFGGGGYGG FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYGASFSRGYD
Subjt:  AEPKKANPPPAPSKRYHDSRPSYSGAY-GDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD

Query:  FRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGYDGTGSAPSGRYHPYGR
        FRGGYGGPDESYGAYNS GAPNTGGYA SYDMG+GTGY AGGRGSFYGSRGGGGGYDG GSAPSGRYHPYGR
Subjt:  FRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGYDGTGSAPSGRYHPYGR

A0A5D3D587 Heterogeneous nuclear ribonucleoprotein 11.7e-19178.39Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPND ATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK
        AGSQ                                                                                           VEIKK
Subjt:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK

Query:  AEPKKANPPPAPSKRYHDSRPSYSGAY-GDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD
        AEPKKANPPPAPSKRYH+SRPSYSGAY GDAYGEFGGGGYGG FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYGASFSRGYD
Subjt:  AEPKKANPPPAPSKRYHDSRPSYSGAY-GDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD

Query:  FRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGYDGTGSAPSGRYHPYGR
        FRGGYGGPDESYGAYNS GAPNTGGYA SYDMG+GTGY AGGRGSFYGSRGGGGGYDG GSAPSGRYHPYGR
Subjt:  FRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGYDGTGSAPSGRYHPYGR

A0A6J1F7E2 heterogeneous nuclear ribonucleoprotein 11.7e-19176.92Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK
        AGSQ                                                                                           VEIKK
Subjt:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK

Query:  AEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDF
        AEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGA FSRGYDF
Subjt:  AEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDF

Query:  RGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR----------GGGGGYDGTGSAPSGRYHPYGR
        RGGYGGPDESYGAYNSS APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR          GGGGGYDG GSAPSGRYHPYGR
Subjt:  RGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR----------GGGGGYDGTGSAPSGRYHPYGR

A0A6J1J2Y6 heterogeneous nuclear ribonucleoprotein 12.3e-19177.04Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK
        AGSQ                                                                                           VEIKK
Subjt:  AGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKK

Query:  AEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDF
        AEPKK+NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGA FSRGYDF
Subjt:  AEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDF

Query:  RGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGYDGTGSAPSGRYHPYGR
        RGGYGGPDESYGAYNSS APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR        GGGGGYDG GSAPSGRYHPYGR
Subjt:  RGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGYDGTGSAPSGRYHPYGR

SwissProt top hitse value%identityAlignment
P09651 Heterogeneous nuclear ribonucleoprotein A12.0e-1929.17Show/hide
Query:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT
        K+F+GGL  ETT      HF  +G +TD V+M+D  T   RGFGFVTYA    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT

Query:  SVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLL------ANGNRLEMAGS-QMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNM
          +E   RD+F QYG+++  +IM D  + + RGF F+TF+   +VD ++       NG+  E+  +   + +               F G   G F  N 
Subjt:  SVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLL------ANGNRLEMAGS-QMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNM

Query:  NIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGG
        N                                                                  +  N               Y G+ GD Y  FG 
Subjt:  NIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGG

Query:  -GGYGGGFRAGGPYGARGGGYGGYG-GNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYN---SSGAPNTGGYAGSYDM
         GGYGGG   G   G+RG G GG G GN  SGYG  G+G   +Y      G+    G++F        G GG    +G YN   S+  P  GG  G    
Subjt:  -GGYGGGFRAGGPYGARGGGYGGYG-GNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYN---SSGAPNTGGYAGSYDM

Query:  GIGTGYPAGGRGSFYGSRGGGGGYDGTGSAPS
        G     P GG G ++      GGY G+ S+ S
Subjt:  GIGTGYPAGGRGSFYGSRGGGGGYDGTGSAPS

P51990 Heterogeneous nuclear ribonucleoprotein A2 homolog 21.1e-2027.56Show/hide
Query:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT
        K+F+GGL  ETT       +  +G++TD V+M+D  +   RGFGFVT++  + VD  +    H I+G+ VE KR + +  S+        KK+FVGGI  
Subjt:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT

Query:  SVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLL------ANGNRLEMAGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMN
          +E   R++F +YG+++  +I+ D  + + RGFGF+TF     VD ++       NG+  E+     + L    + ++     ++   FG G      N
Subjt:  SVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLL------ANGNRLEMAGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMN

Query:  IMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAY------
                                       S    N+                            +  +      + Y D    Y G  G  Y      
Subjt:  IMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAY------

Query:  ----GEFGGG-GYG-----GGFRAGGPYGARGGGYGG----YGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSS
            G FGGG  YG     GG+  G  YG +GGGYGG    YGG ++ G G Y     G Y +  S     + G +F       G YGG   +YG  N S
Subjt:  ----GEFGGG-GYG-----GGFRAGGPYGARGGGYGG----YGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSS

Query:  GAPNTGGYAG
        GA   GGY G
Subjt:  GAPNTGGYAG

Q22037 Heterogeneous nuclear ribonucleoprotein A15.3e-2028.3Show/hide
Query:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKG--SSSSRDFKTKKIFVGGIPT
        KIFVGGL   TT     + +  +GEITD ++M+D  T   RGFGFVT++  + VD  ++   HII+GK V+ KR +P+   + S  +  TK+++V G+  
Subjt:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIED-THIINGKQVEIKRTIPKG--SSSSRDFKTKKIFVGGIPT

Query:  SVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKP
           ED   ++F +YG V + +I+ D +T + RGFGF+TF+   +VD  +           Q  H+                                   
Subjt:  SVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKP

Query:  VFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGF
        V  +RC                                           +V   + K E  KA        R   SR    G Y    G  GGGG+GG  
Subjt:  VFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGYGGGF

Query:  RAGGP---YGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAG
        + GGP    G  GGG GGYGG+   G+G  G GG G +           +G    +G   +GG+GGP +             GG+ G    G G G+  G
Subjt:  RAGGP---YGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAG

Query:  GRGSFYGSRGGGGGYDGTGSAPSG
        G+G   G  GG  G      A  G
Subjt:  GRGSFYGSRGGGGGYDGTGSAPSG

Q8W034 Heterogeneous nuclear ribonucleoprotein 13.1e-2830Show/hide
Query:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +  +HF +YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQMEHLPPLLLHNLSIYFLDQFLGFGL
          KTKKIFVGG+P ++ ++EFR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L                     H+LS            
Subjt:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQMEHLPPLLLHNLSIYFLDQFLGFGL

Query:  GTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPKKANP----------PPAPSKRYHDS
                                                                          VE+K+A PK ANP               + Y  +
Subjt:  GTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPKKANP----------PPAPSKRYHDS

Query:  RPSYSG-----------AYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD--FRGGYGG
          SY G           + G+    +G  GYG G+   G  GA  G YGGY G+   GYG   T G GA    P  GY +  G +    +D     GYG 
Subjt:  RPSYSG-----------AYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD--FRGGYGG

Query:  PDESYGAYNS-----SGAPNT-------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGYDGTGSAPSGRYHPYG
        P    GA +S       AP T             GGY+GS D G G         G P+GG  +  GS G  GG  G GS  S     YG
Subjt:  PDESYGAYNS-----SGAPNT-------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGYDGTGSAPSGRYHPYG

Q99383 Nuclear polyadenylated RNA-binding protein 49.6e-2229.82Show/hide
Query:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVD
        K+F+GGL  +TT     ++FG YG +TD  IMKD  TG  RGFGF+++  PS VD+V++  HI++GK ++ KR IP+        KT KIFVGGI   V 
Subjt:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVD

Query:  EDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLAN------GNRLEMAGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDN--NMNI
          EF +FF Q+G + + Q+M D  T +SRGFGF+T+++  AVD +  N        ++E+  ++  H+     +N      +     G G F N  + N 
Subjt:  EDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLAN------GNRLEMAGSQMEHLPPLLLHNLSIYFLDQFLGFGLGTFDN--NMNI

Query:  MLKKPVFDYRCPKL-PLTVCN----LRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPKKA---NPPPAPSKRYHDSRPSYSGAYGDA
        M + P+     P + P  + +    ++ YY  +          + +  ++++ + +           A P  A   N P   S     S P+ S +  + 
Subjt:  MLKKPVFDYRCPKL-PLTVCN----LRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPKKA---NPPPAPSKRYHDSRPSYSGAYGDA

Query:  YGEFGGGGYGGGFRAGGPYGARGGGYGG---YGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSR-GYDFRGGYGGPDESYGAYN
          +    G      +G P      G  G   Y  +  SGYG Y        R D    Y+ R G +  R G   RGGY   +  Y  YN
Subjt:  YGEFGGGGYGGGFRAGGPYGARGGGYGG---YGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSR-GYDFRGGYGGPDESYGAYN

Arabidopsis top hitse value%identityAlignment
AT1G17640.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.5e-4952.1Show/hide
Query:  ASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSS---RDFKTKKIFVG
        +S GK+FVGG+  ETT+  F  +FG +GE+ DSVIM DR TG+PRGFGFVT+AD +V +KV+E+ H+I+ ++V++KRT+P+G   +      KT+KIFVG
Subjt:  ASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSS---RDFKTKKIFVG

Query:  GIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQME
        G+P  ++EDE +++F  YG++ EHQIM DH T RSRGFGF+TF+TE +VD L ++G   E+   Q+E
Subjt:  GIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQME

AT3G13224.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.0e-6862.63Show/hide
Query:  SRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR
        SR+D    GDGAS GKIF+GGL ++TT+  F KHFG YGEITDSVIM+DR TG PRGFGF+T+ADPSVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+
Subjt:  SRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQMEHLPPLLLHNLSIYFLDQFLGF
        D KTKKIFVGGIP++V EDE +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN ++MA +Q+     L    L  +F+  +L +
Subjt:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQMEHLPPLLLHNLSIYFLDQFLGF

AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-6441.31Show/hide
Query:  SRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR
        SR+D    GDGAS GKIF+GGL ++TT+  F KHFG YGEITDSVIM+DR TG PRGFGF+T+ADPSVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+
Subjt:  SRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQME-----------HLPPLL-LHNLS
        D KTKKIFVGGIP++V EDE +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN ++MA +Q+E             PP    H   
Subjt:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQME-----------HLPPLL-LHNLS

Query:  IYFLDQFLGFG--LGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPKKANPPPAPSKR
            D +  +G   G FD                                                                           PP P + 
Subjt:  IYFLDQFLGFG--LGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPKKANPPPAPSKR

Query:  YHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSAR---YGASF-SRGYDFRGGYG------
        +      Y+G YG     +G G  G  F         GGGY  YGG           G +G YR +P +GYS+R   YG+ F   GY  RGG G      
Subjt:  YHDSRPSYSGAYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSAR---YGASF-SRGYDFRGGYG------

Query:  -GPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYG
         G  E YG Y   G P   GY G+Y+ G G G    G G  YG
Subjt:  -GPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAGGRGSFYG

AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-2930Show/hide
Query:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +  +HF +YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQMEHLPPLLLHNLSIYFLDQFLGFGL
          KTKKIFVGG+P ++ ++EFR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L                     H+LS            
Subjt:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQMEHLPPLLLHNLSIYFLDQFLGFGL

Query:  GTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPKKANP----------PPAPSKRYHDS
                                                                          VE+K+A PK ANP               + Y  +
Subjt:  GTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPKKANP----------PPAPSKRYHDS

Query:  RPSYSG-----------AYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD--FRGGYGG
          SY G           + G+    +G  GYG G+   G  GA  G YGGY G+   GYG   T G GA    P  GY +  G +    +D     GYG 
Subjt:  RPSYSG-----------AYGDAYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD--FRGGYGG

Query:  PDESYGAYNS-----SGAPNT-------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGYDGTGSAPSGRYHPYG
        P    GA +S       AP T             GGY+GS D G G         G P+GG  +  GS G  GG  G GS  S     YG
Subjt:  PDESYGAYNS-----SGAPNT-------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGYDGTGSAPSGRYHPYG

AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-9648.07Show/hide
Query:  MDSKPNDAATNGEHDDAKPLNH-KDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI
        MD    +     E  D KP    +DD  +  P   G   SAGKIFVGGL RETTSA+F+KHFG YGEITDSVIMKDRKTG PRGFGFVTYAD SVVDKVI
Subjt:  MDSKPNDAATNGEHDDAKPLNH-KDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI

Query:  EDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQ
        +D HII GKQVEIKRTIP+GS SS DFKTKKIFVGGIP+SVD+DEF++FFMQ+GE+KEHQIMRDHST RSRGFGF+T+E+E  VD LLA GNR+E++G+Q
Subjt:  EDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQ

Query:  MEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPK
                                                                                                   VEIKKAEPK
Subjt:  MEHLPPLLLHNLSIYFLDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPK

Query:  KANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGY---GGGFRAGGPY-GARGGGYGGYGGNDFSGYGMYG-TGGIGAYREDPSMGYSARY---GASFSR
        K N    PSKR+ DSR ++ G YGD YG   GGGY   GG +++GG Y G R GGYGGYGG +F GYG  G  GG+G YR +P++GYS RY   G  ++R
Subjt:  KANPPPAPSKRYHDSRPSYSGAYGDAYGEFGGGGY---GGGFRAGGPY-GARGGGYGGYGGNDFSGYGMYG-TGGIGAYREDPSMGYSARY---GASFSR

Query:  -GYDF---------------------RGGYGGPDESY-GAYNSS---------GAPNTGGY--AGSYDM---------GIGTGYPAGGRGSFYGSRGGGG
         GY                        GGYGGP  SY G Y SS         G    GGY   G YDM         G G G    G GSFYG  GG G
Subjt:  -GYDF---------------------RGGYGGPDESY-GAYNSS---------GAPNTGGY--AGSYDM---------GIGTGYPAGGRGSFYGSRGGGG

Query:  GYDGTGSAPSGRYHPYGR
        GY G G   SGRYHPYGR
Subjt:  GYDGTGSAPSGRYHPYGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAAAACTCCATGGATTCCAAGCCAAATGATGCTGCCACTAACGGTGAACATGACGATGCCAAGCCCTTGAACCATAAAGATGATGGGAGTAGACATGACCCTCC
ACCTCATGGCGACGGAGCGAGTGCTGGGAAAATCTTTGTTGGAGGTTTACCGCGGGAAACGACTTCCGCACAATTTGTTAAACATTTTGGTGACTATGGGGAAATTACGG
ACTCTGTTATAATGAAGGACCGGAAGACTGGACATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACACACATATTATT
AATGGGAAACAAGTGGAAATCAAGCGAACGATACCCAAAGGATCATCCAGCTCTCGAGATTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCTACTTCTGTAGATGA
AGATGAGTTCAGAGATTTTTTTATGCAATATGGTGAGGTTAAGGAACACCAGATTATGCGGGATCACTCCACCAGTCGGTCTCGTGGGTTTGGTTTTATTACATTTGAGA
CGGAGCAAGCAGTTGATGATCTCTTGGCAAATGGAAACAGGCTTGAGATGGCAGGCAGTCAGATGGAACATCTTCCTCCCTTGTTGCTGCACAACCTTAGTATTTATTTT
TTGGACCAATTTCTTGGATTTGGACTAGGAACCTTCGACAACAACATGAACATTATGCTAAAAAAACCAGTTTTTGATTATAGATGTCCAAAATTGCCATTGACTGTCTG
CAATCTGCGTAGCTACTATGTCTTACTTGCAATCTCGGTAGCCACGTCAAACTATCCTCTATTGAAATGCATGTTGAAAAGAATTTTTTTGAATTTAACTGCAATAAATG
TTTTTGTGGAAATCAAGAAGGCGGAACCAAAAAAAGCAAATCCACCTCCAGCCCCTTCAAAGAGATACCATGATTCAAGGCCGAGTTACAGTGGTGCCTATGGGGATGCA
TATGGGGAGTTTGGAGGTGGTGGGTATGGTGGTGGTTTTAGGGCAGGTGGACCGTATGGTGCTAGAGGTGGTGGATATGGTGGATATGGTGGAAACGATTTTAGTGGTTA
TGGAATGTATGGTACTGGTGGCATTGGAGCTTACCGGGAAGACCCCTCTATGGGGTACTCTGCGCGTTATGGAGCAAGCTTCAGTAGAGGTTATGATTTTAGAGGTGGCT
ATGGTGGACCTGACGAGAGTTATGGTGCGTATAACAGCAGTGGTGCTCCTAATACTGGTGGGTATGCGGGCAGCTATGATATGGGCATTGGCACTGGATACCCTGCCGGT
GGTAGAGGCTCCTTTTATGGAAGTAGAGGAGGAGGAGGAGGATATGATGGCACAGGGAGTGCTCCAAGTGGTCGTTATCATCCTTATGGGCGGTAG
mRNA sequenceShow/hide mRNA sequence
GAAAGCAAGTCTGGAGGTTGCGAACTGCGAATTCTAGGGTTTAAGGGGGCGCCATTTTTTCCGTACTCAGCGGTGCGAACCAACAGCAGCTCACACATGTCCTCTAGGGC
TTAGCCATCTCCCTCGTTCCTTTGTCTTTACCCTCTCTCTCTTCTCCTTCTCCTCCTCCTTCTTCCCTTTATTCCGTTAATGTCGGAAAACTCCATGGATTCCAAGCCAA
ATGATGCTGCCACTAACGGTGAACATGACGATGCCAAGCCCTTGAACCATAAAGATGATGGGAGTAGACATGACCCTCCACCTCATGGCGACGGAGCGAGTGCTGGGAAA
ATCTTTGTTGGAGGTTTACCGCGGGAAACGACTTCCGCACAATTTGTTAAACATTTTGGTGACTATGGGGAAATTACGGACTCTGTTATAATGAAGGACCGGAAGACTGG
ACATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACACACATATTATTAATGGGAAACAAGTGGAAATCAAGCGAACGA
TACCCAAAGGATCATCCAGCTCTCGAGATTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCTACTTCTGTAGATGAAGATGAGTTCAGAGATTTTTTTATGCAATAT
GGTGAGGTTAAGGAACACCAGATTATGCGGGATCACTCCACCAGTCGGTCTCGTGGGTTTGGTTTTATTACATTTGAGACGGAGCAAGCAGTTGATGATCTCTTGGCAAA
TGGAAACAGGCTTGAGATGGCAGGCAGTCAGATGGAACATCTTCCTCCCTTGTTGCTGCACAACCTTAGTATTTATTTTTTGGACCAATTTCTTGGATTTGGACTAGGAA
CCTTCGACAACAACATGAACATTATGCTAAAAAAACCAGTTTTTGATTATAGATGTCCAAAATTGCCATTGACTGTCTGCAATCTGCGTAGCTACTATGTCTTACTTGCA
ATCTCGGTAGCCACGTCAAACTATCCTCTATTGAAATGCATGTTGAAAAGAATTTTTTTGAATTTAACTGCAATAAATGTTTTTGTGGAAATCAAGAAGGCGGAACCAAA
AAAAGCAAATCCACCTCCAGCCCCTTCAAAGAGATACCATGATTCAAGGCCGAGTTACAGTGGTGCCTATGGGGATGCATATGGGGAGTTTGGAGGTGGTGGGTATGGTG
GTGGTTTTAGGGCAGGTGGACCGTATGGTGCTAGAGGTGGTGGATATGGTGGATATGGTGGAAACGATTTTAGTGGTTATGGAATGTATGGTACTGGTGGCATTGGAGCT
TACCGGGAAGACCCCTCTATGGGGTACTCTGCGCGTTATGGAGCAAGCTTCAGTAGAGGTTATGATTTTAGAGGTGGCTATGGTGGACCTGACGAGAGTTATGGTGCGTA
TAACAGCAGTGGTGCTCCTAATACTGGTGGGTATGCGGGCAGCTATGATATGGGCATTGGCACTGGATACCCTGCCGGTGGTAGAGGCTCCTTTTATGGAAGTAGAGGAG
GAGGAGGAGGATATGATGGCACAGGGAGTGCTCCAAGTGGTCGTTATCATCCTTATGGGCGGTAG
Protein sequenceShow/hide protein sequence
MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHII
NGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQMEHLPPLLLHNLSIYF
LDQFLGFGLGTFDNNMNIMLKKPVFDYRCPKLPLTVCNLRSYYVLLAISVATSNYPLLKCMLKRIFLNLTAINVFVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDA
YGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSSGAPNTGGYAGSYDMGIGTGYPAG
GRGSFYGSRGGGGGYDGTGSAPSGRYHPYGR