CuGenDBv2

Gene ID	CmUC10G197360
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Mediator of RNA polymerase II transcription subunit 4
Genome location	CmU531Chr10:29113619..29114626
RNA-Seq Expression	CmUC10G197360
Synteny	CmUC10G197360
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0070847 - core mediator complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function) GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR019258 - Mediator complex, subunit Med4

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004142109.1 mediator of RNA polymerase II transcription subunit 4 [Cucumis sativus]

5.9e-164

93.15

Show/hide

Query:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
        MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQT SSP T LDSTPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
Subjt:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK

Query:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
        LK+AEQVLDVLFDDYADYQRPRR KT+ D ENESLCS  TTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
Subjt:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD

Query:  VGLPKAVESTEKAIEPMIEPPTDANPLSN-MAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLH
        VGLPKAVESTEK IEPMIEPP    P +N +AAIQGLLPPNITVPSGWKPGMP+ELP DLPMPPPGWKPGDPV LPPMDSLPVTRVDEPQLRPNALPGLH
Subjt:  VGLPKAVESTEKAIEPMIEPPTDANPLSN-MAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLH

Query:  KPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        KPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  KPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

XP_008449288.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4 [Cucumis melo]

1.1e-167

94.4

Show/hide

Query:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
        MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQT SSP T LDSTPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
Subjt:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK

Query:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
        LKDAEQVLDVLFDDYADYQRPRRVKT+   ENESLCS  TTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
Subjt:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD

Query:  VGLPKAVESTEKAIEPMIEPP----TDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALP
        VGLPKAVESTEK IEPMIEPP     DANPLSNMAAIQGLLPPNITVPSGWKPGMP+ELP DLPMPPPGWKPGDPV LPPMDSLPVTRVDEPQLRPNALP
Subjt:  VGLPKAVESTEKAIEPMIEPP----TDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALP

Query:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

XP_022143910.1 mediator of RNA polymerase II transcription subunit 4 [Momordica charantia]

1.6e-164

92.06

Show/hide

Query:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
        MA+LASKLFEVSPNRSLWLTAFRGSLPTFL SQT SSP T LD+TPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
Subjt:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK

Query:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
        LKDAEQVLDVLFDDYADY+RP+RVKTKDD EN+SLCS  TTVASQL+LSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLYNFA+LD
Subjt:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD

Query:  VGLPKAVESTEKAIEPMIEP----PTDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEP-QLRPNAL
        VGLPKAVESTEK IEPMIEP    PTDANPL+N+AAIQGLLPPNITVPSGWKPGMP+ELPRDLPMPPPGWKPGDPVPLPP+DSLPV RVDEP QLRPNAL
Subjt:  VGLPKAVESTEKAIEPMIEP----PTDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEP-QLRPNAL

Query:  PGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        PGLHKPPEPIQVR VQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  PGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

XP_023518528.1 mediator of RNA polymerase II transcription subunit 4 [Cucurbita pepo subsp. pepo]

1.8e-157

88.79

Show/hide

Query:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
        MASLASKLFEV PNR+LWLTAFRGSLPTFL SQT S+P T LDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYE+RAKDAALRAFANK
Subjt:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK

Query:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
        LKDAEQVLDVLFDDYADYQ  +RVKT DD ENESLCS +TTVASQL+LSDILSYAH+ISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLY+FA+LD
Subjt:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD

Query:  VGLPKAVESTEKAIEPMIEP----PTDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALP
        VGLPK+VESTEK IEPMIEP    PTDANPL+ +A IQGLLPPNITVPSGWKPGMP+ELPRDLPMPPPGWKPGDPVPLPP+DSLPV RVDEPQLR NALP
Subjt:  VGLPKAVESTEKAIEPMIEP----PTDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALP

Query:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        GLH+P EPIQVRHVQLDILDQDDDSSDY S+EGSSEDDD
Subjt:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

XP_038882754.1 mediator of RNA polymerase II transcription subunit 4 [Benincasa hispida]

5.0e-171

95.28

Show/hide

Query:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
        MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQT SSP TSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
Subjt:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK

Query:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
        LKDAEQVLDVLFDDYADYQRPRRVK KDD ENESLCS  TTVASQL+LSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
Subjt:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD

Query:  VGLPKAVESTEKAIEPMIEP----PTDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALP
        +GLPKAVESTEK IEPMIEP    PTDANPLSNMA+IQGLLPPNITVPSGWKPGMP+ELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNA P
Subjt:  VGLPKAVESTEKAIEPMIEP----PTDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALP

Query:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXB7 Mediator of RNA polymerase II transcription subunit 4

2.9e-164

93.15

Show/hide

Query:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
        MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQT SSP T LDSTPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
Subjt:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK

Query:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
        LK+AEQVLDVLFDDYADYQRPRR KT+ D ENESLCS  TTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
Subjt:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD

Query:  VGLPKAVESTEKAIEPMIEPPTDANPLSN-MAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLH
        VGLPKAVESTEK IEPMIEPP    P +N +AAIQGLLPPNITVPSGWKPGMP+ELP DLPMPPPGWKPGDPV LPPMDSLPVTRVDEPQLRPNALPGLH
Subjt:  VGLPKAVESTEKAIEPMIEPPTDANPLSN-MAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLH

Query:  KPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        KPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  KPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

A0A1S3BLP6 Mediator of RNA polymerase II transcription subunit 4

5.6e-168

94.4

Show/hide

Query:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
        MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQT SSP T LDSTPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
Subjt:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK

Query:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
        LKDAEQVLDVLFDDYADYQRPRRVKT+   ENESLCS  TTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
Subjt:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD

Query:  VGLPKAVESTEKAIEPMIEPP----TDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALP
        VGLPKAVESTEK IEPMIEPP     DANPLSNMAAIQGLLPPNITVPSGWKPGMP+ELP DLPMPPPGWKPGDPV LPPMDSLPVTRVDEPQLRPNALP
Subjt:  VGLPKAVESTEKAIEPMIEPP----TDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALP

Query:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

A0A5A7TZC1 Mediator of RNA polymerase II transcription subunit 4

5.6e-168

94.4

Show/hide

Query:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
        MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQT SSP T LDSTPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
Subjt:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK

Query:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
        LKDAEQVLDVLFDDYADYQRPRRVKT+   ENESLCS  TTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
Subjt:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD

Query:  VGLPKAVESTEKAIEPMIEPP----TDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALP
        VGLPKAVESTEK IEPMIEPP     DANPLSNMAAIQGLLPPNITVPSGWKPGMP+ELP DLPMPPPGWKPGDPV LPPMDSLPVTRVDEPQLRPNALP
Subjt:  VGLPKAVESTEKAIEPMIEPP----TDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALP

Query:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

A0A6J1CQ51 Mediator of RNA polymerase II transcription subunit 4

7.5e-165

92.06

Show/hide

Query:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
        MA+LASKLFEVSPNRSLWLTAFRGSLPTFL SQT SSP T LD+TPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
Subjt:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK

Query:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
        LKDAEQVLDVLFDDYADY+RP+RVKTKDD EN+SLCS  TTVASQL+LSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLYNFA+LD
Subjt:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD

Query:  VGLPKAVESTEKAIEPMIEP----PTDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEP-QLRPNAL
        VGLPKAVESTEK IEPMIEP    PTDANPL+N+AAIQGLLPPNITVPSGWKPGMP+ELPRDLPMPPPGWKPGDPVPLPP+DSLPV RVDEP QLRPNAL
Subjt:  VGLPKAVESTEKAIEPMIEP----PTDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEP-QLRPNAL

Query:  PGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        PGLHKPPEPIQVR VQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  PGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

A0A6J1I9F9 Mediator of RNA polymerase II transcription subunit 4

2.0e-157

88.79

Show/hide

Query:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
        MASLASKLFEV PNR+LWLTAFRGSLPTFL SQT S+P T LDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYE+RAKDAALRAFANK
Subjt:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK

Query:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD
        LKDAEQVLDVLFDDYADYQ  +RVKT DD ENESLCS TTTVASQL+LSDILSYAH+ISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLY+FA+LD
Subjt:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD

Query:  VGLPKAVESTEKAIEPMIEP----PTDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALP
        VGLPK+VESTEK IEPMIE     PTDANPL+ +A IQGLLPPNITVPSGWKPGMP+ELPRDLPMPPPGWKPGDPVPLPP+DSLPV RVDEPQLR NALP
Subjt:  VGLPKAVESTEKAIEPMIEP----PTDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALP

Query:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        GLH+P EPIQVRHVQLDILDQDDDSSDY S+EGSSEDDD
Subjt:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

SwissProt top hits

e value

%identity

Alignment

Q9LZ00 Mediator of RNA polymerase II transcription subunit 4

1.1e-117

67.55

Show/hide

Query:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
        MA L SKLF+VSPNR++WL+AFRGSLP+FL+S +   P    + +PS++KEILS FN LQTQLFEAV ELQEILDLQD+KQK+A EI++KD++L AFANK
Subjt:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK

Query:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTE---NESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFA
        LKDAE+VLD+L DDY+DY++P+R K ++D E   NES  S++TTV+SQL+L DIL+YAH+ISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLY FA
Subjt:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTE---NESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFA

Query:  NLDVGLPKAVESTEKAIEPMIEPPTDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQ-LRPNALP
        +LD+GLPK VE+ EK +E +IEPP     + +++AI  LLPPNI VPSGWKPGMP+ELPRDLP+PPPGWKPGDPV LPP++S+   R ++ Q +RP+   
Subjt:  NLDVGLPKAVESTEKAIEPMIEPPTDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQ-LRPNALP

Query:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        GLH+PP+ IQVR VQLDIL +DDDSSDY+SD+ SS+D+D
Subjt:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

Arabidopsis top hits

e value

%identity

Alignment

AT5G02850.1 hydroxyproline-rich glycoprotein family protein

8.1e-119

67.55

Show/hide

Query:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK
        MA L SKLF+VSPNR++WL+AFRGSLP+FL+S +   P    + +PS++KEILS FN LQTQLFEAV ELQEILDLQD+KQK+A EI++KD++L AFANK
Subjt:  MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANK

Query:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTE---NESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFA
        LKDAE+VLD+L DDY+DY++P+R K ++D E   NES  S++TTV+SQL+L DIL+YAH+ISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLY FA
Subjt:  LKDAEQVLDVLFDDYADYQRPRRVKTKDDTE---NESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFA

Query:  NLDVGLPKAVESTEKAIEPMIEPPTDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQ-LRPNALP
        +LD+GLPK VE+ EK +E +IEPP     + +++AI  LLPPNI VPSGWKPGMP+ELPRDLP+PPPGWKPGDPV LPP++S+   R ++ Q +RP+   
Subjt:  NLDVGLPKAVESTEKAIEPMIEPPTDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQ-LRPNALP

Query:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        GLH+PP+ IQVR VQLDIL +DDDSSDY+SD+ SS+D+D
Subjt:  GLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

Sequences

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CDS sequence

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ATGGCTTCATTAGCTTCCAAGCTCTTTGAAGTCTCCCCCAACCGCTCCCTTTGGCTCACTGCATTTCGGGGTTCTCTTCCCACTTTTCTTACTTCTCAAACCCACTCCTC
ACCCTTTACCTCTCTTGATTCTACTCCCTCTACTTCCAAAGAAATTTTGTCACTCTTTAATGTTCTGCAGACCCAGTTGTTTGAAGCTGTTGCCGAGCTTCAGGAGATTC
TTGATTTGCAAGACTCTAAGCAGAAGATTGCTTATGAGATACGGGCCAAAGATGCTGCTCTTCGTGCTTTTGCTAATAAGCTCAAGGATGCTGAGCAGGTTCTTGATGTT
TTGTTTGATGATTATGCGGATTATCAGCGACCTCGACGGGTTAAAACAAAGGATGATACTGAAAACGAGTCTTTGTGTTCGACTACAACTACAGTTGCATCCCAGTTGAG
ATTATCTGATATATTGTCATATGCTCATAGGATAAGCTATACTACTTTTGCACCACCTGAATTTGGTGCTGGACAAGCTCCATTACGTGGAGCACTTCCCCCTGCTCCGC
AAGACGAGCAAATGCGTGCGTCTCAGTTGTATAATTTTGCAAACCTTGATGTTGGCTTGCCTAAAGCAGTTGAAAGCACTGAGAAAGCTATAGAGCCCATGATTGAGCCT
CCAACAGATGCTAATCCTCTTTCTAATATGGCTGCTATTCAGGGTCTGCTTCCTCCAAATATTACTGTCCCATCTGGTTGGAAACCTGGAATGCCTATTGAATTACCTAG
AGATTTACCTATGCCCCCTCCTGGATGGAAGCCTGGGGACCCTGTGCCATTACCCCCAATGGACTCTCTTCCTGTTACTAGAGTTGATGAGCCACAATTGAGGCCTAATG
CTCTTCCAGGATTGCACAAACCTCCTGAGCCAATTCAAGTTAGGCATGTTCAGTTGGATATTCTTGATCAAGACGATGATAGTAGTGATTACACCAGTGATGAAGGAAGC
TCTGAAGATGATGATTGA

mRNA sequence

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Protein sequence

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MASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTHSSPFTSLDSTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDV
LFDDYADYQRPRRVKTKDDTENESLCSTTTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKAIEPMIEP
PTDANPLSNMAAIQGLLPPNITVPSGWKPGMPIELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGS
SEDDD

CmUC10G197360 (gene) of Watermelon (USVL531) v1 genome