CuGenDBv2

Gene ID	CmUC10G200900
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Splicing factor 3A subunit 2
Genome location	CmU531Chr10:32914967..32918256
RNA-Seq Expression	CmUC10G200900
Synteny	CmUC10G200900
Gene Ontology terms	GO:0000245 - spliceosomal complex assembly (biological process) GO:0005686 - U2 snRNP (cellular component) GO:0071004 - U2-type prespliceosome (cellular component) GO:0071013 - catalytic step 2 spliceosome (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000690 - Matrin/U1-C, C2H2-type zinc finger IPR003604 - Matrin/U1-C-like, C2H2-type zinc finger IPR031781 - SF3A2 domain IPR036236 - Zinc finger C2H2 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0043971.1 splicing factor 3A subunit 2 [Cucumis melo var. makuwa]

6.6e-152

83.51

Show/hide

Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
        K          + + + +     P+F  KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Subjt:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK

Query:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
                 +    +          W     +  LQLYFKSKPQEANKPPPVPAANGT+PS APPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
Subjt:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP

Query:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG
        PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQPPPPPPNMG
Subjt:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG

XP_004137848.1 splicing factor 3A subunit 2 [Cucumis sativus]

4.3e-151

82.97

Show/hide

Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
        K +                        VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Subjt:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK

Query:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
                 +    +          W     +  LQLYFKSKPQEANKPPPVPAANGT+PS APPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
Subjt:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP

Query:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG
        PPPSVMANGPPRPMPPGGAPPIPPPPP+GNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG
Subjt:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG

XP_008442733.1 PREDICTED: splicing factor 3A subunit 2 [Cucumis melo]

7.3e-151

83.24

Show/hide

Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
        K +                        VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Subjt:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK

Query:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
                 +    +          W     +  LQLYFKSKPQEANKPPPVPAANGT+PS APPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
Subjt:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP

Query:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG
        PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQPPPPPPNMG
Subjt:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG

XP_023005145.1 splicing factor 3A subunit 2 [Cucurbita maxima]

3.3e-143

80.54

Show/hide

Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
        K +                        VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Subjt:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK

Query:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
                 +    +          W     +  LQLYFKSKPQEANKP  VPAANGT+       PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
Subjt:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP

Query:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG
        PPP VMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNR PMPPPPQGFPGQG+RQPPPPPPNMG
Subjt:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG

XP_038905938.1 splicing factor 3A subunit 2 [Benincasa hispida]

8.0e-150

82.7

Show/hide

Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
        K +                        VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Subjt:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK

Query:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
                 +    +          W     +  LQLYFKSKPQEANKPPPVPAANGT+PS APPRP+PPPPQAP PPPPPPQQG PPRVPPPPMPGSLP
Subjt:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP

Query:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG
        PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG
Subjt:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LEB1 Matrin-type domain-containing protein

2.1e-151

82.97

Show/hide

Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
        K +                        VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Subjt:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK

Query:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
                 +    +          W     +  LQLYFKSKPQEANKPPPVPAANGT+PS APPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
Subjt:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP

Query:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG
        PPPSVMANGPPRPMPPGGAPPIPPPPP+GNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG
Subjt:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG

A0A1S3B729 splicing factor 3A subunit 2

3.5e-151

83.24

Show/hide

Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
        K +                        VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Subjt:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK

Query:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
                 +    +          W     +  LQLYFKSKPQEANKPPPVPAANGT+PS APPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
Subjt:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP

Query:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG
        PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQPPPPPPNMG
Subjt:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG

A0A5A7TQW8 Splicing factor 3A subunit 2

3.2e-152

83.51

Show/hide

Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
        K          + + + +     P+F  KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Subjt:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK

Query:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
                 +    +          W     +  LQLYFKSKPQEANKPPPVPAANGT+PS APPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
Subjt:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP

Query:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG
        PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQPPPPPPNMG
Subjt:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG

A0A5D3DPC7 Splicing factor 3A subunit 2

3.5e-151

83.24

Show/hide

Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
        K +                        VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Subjt:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK

Query:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
                 +    +          W     +  LQLYFKSKPQEANKPPPVPAANGT+PS APPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
Subjt:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP

Query:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG
        PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQ FPGQGIRQPPPPPPNMG
Subjt:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG

A0A6J1KWM2 splicing factor 3A subunit 2

1.6e-143

80.54

Show/hide

Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
        K +                        VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
Subjt:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK

Query:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
                 +    +          W     +  LQLYFKSKPQEANKP  VPAANGT+       PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
Subjt:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP

Query:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG
        PPP VMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNR PMPPPPQGFPGQG+RQPPPPPPNMG
Subjt:  PPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG

SwissProt top hits

e value

%identity

Alignment

A5PJN8 Splicing factor 3A subunit 2

1.0e-59

50.26

Show/hide

Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKNNRN
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K K    
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKNNRN

Query:  SEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK-----
          V++  F              VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFK     
Subjt:  SEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK-----

Query:  --KLEYIFVIHLTLLALYLQLSCILGIWLLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPG
          K E  F  H         L     +   P      + P    +PPP P  NG  P    P  LPPPP      PP PP  P    PP  P  PPP PG
Subjt:  --KLEYIFVIHLTLLALYLQLSCILGIWLLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPG

Query:  SLPPPPSV--MANG--PPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPP---PPPNMG
          PP P V   A+G  PP P     AP + PP PV +   +   P      PP P      P  G+  P P   PPP+ G
Subjt:  SLPPPPSV--MANG--PPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPP---PPPNMG

Q15428 Splicing factor 3A subunit 2

1.6e-60

50.39

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Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKNNRN
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K K    
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKNNRN

Query:  SEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK-----
          V++  F              VKIGRPGY+VTKQ DSE  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFK     
Subjt:  SEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK-----

Query:  --KLEYIFVIHLTLLALYLQLSCILGIWLLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPG
          K E  F  H         L     +   P      + P    +PPP P  NG  P    P  LPPPP      PP PP  P    PP  P  PPP PG
Subjt:  --KLEYIFVIHLTLLALYLQLSCILGIWLLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPG

Query:  SLPPPPSV--MANG--PPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP---PPPNMG
          PP P V   A+G  PP P     AP + PP P  +   +   P      PP P   PP  G   P  G+  P P   PPP+ G
Subjt:  SLPPPPSV--MANG--PPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP---PPPNMG

Q54B65 Splicing factor 3A subunit 2

2.8e-52

56.85

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Query:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKNN
        E+G K GSGG  S+Q + IDRRER ++L LE +D++KDPY + NH+GS+EC+LCLT+HNN GNYLAHTQGK+HQT+LA+RAA+E +E      P   KNN
Subjt:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKNN

Query:  RNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
             ++   K+            +KIGRPGY++ KQ DS+T Q SLLFQI+YPEIE   +PRHR MS++EQRV+  +K YQYLLFAAEPYE IAFK
Subjt:  RNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK

Q62203 Splicing factor 3A subunit 2

1.7e-57

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Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKNNRN
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P + K    
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKNNRN

Query:  SEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK-----
          V++  F              VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFK     
Subjt:  SEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK-----

Query:  --KLEYIFVIHLTLLALYLQLSCILGIWLLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPG
          K E  F         +LQ    +     P  L   + P    +PPP P  NG  P    P  LPPPP      PP PP  P    PP  P  PPP PG
Subjt:  --KLEYIFVIHLTLLALYLQLSCILGIWLLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPG

Query:  SLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP--PPPNMG
          PP P V    PP       AP + PP PV +   +   P      PP P   PP  G   P  G+  P P   PP  G
Subjt:  SLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP--PPPNMG

Q6AXT8 Splicing factor 3A subunit 2

2.0e-58

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Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKNNRN
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K K    
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKNNRN

Query:  SEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK-----
          V++  F              VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFK     
Subjt:  SEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK-----

Query:  --KLEYIFVIHLTLLALYLQLSCILGIWLLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPG
          K E  F  H         L     +   P      + P    +PPP P  NG  P    P  LPPPP      PP PP  P    PP  P  PPP PG
Subjt:  --KLEYIFVIHLTLLALYLQLSCILGIWLLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQA----PPPPPPPPQQGAPPRVP--PPPMPG

Query:  SLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP--PPPNMG
          PP P V    PP       AP + PP PV +   +   P      PP P   PP  G   P  G+  P P   PP  G
Subjt:  SLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMP---PPPQGF--PGQGIRQPPP--PPPNMG

Arabidopsis top hits

e value

%identity

Alignment

AT2G32600.1 hydroxyproline-rich glycoprotein family protein

3.5e-87

63.52

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Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAAS QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAK+AP +PQP K 
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK
           RN  V+                  VKIGRPGYRVTKQ+D E +QRSLLFQIEYPEIED  KPRHRFMSSYEQ+VQP+DK YQYLLFAAEPYEIIAFK
Subjt:  KNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFK

Query:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP
                 +    +          W     +  LQ+YFK    E NKP     ANG                 PPPPPPPP Q  P   PPPP  G  P
Subjt:  KLEYIFVIHLTLLALYLQLSCILGIW-----LLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLP

Query:  PPPSVMANGPPRPMPPGG
        PPP  MAN   RPMPP G
Subjt:  PPPSVMANGPPRPMPPGG

AT5G07740.1 actin binding

1.7e-04

48.85

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Query:  PQEANKPPPVPAANGTMPSAAPPRPLPPPPQ--APPPPPPPPQQ-GAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPG
        P     PPP P    +  S+ PP P PPP    APPPPPPPP   GAPP  PPPPM G  PPPP      PP PM  GGAPP PPPPP+         P 
Subjt:  PQEANKPPPVPAANGTMPSAAPPRPLPPPPQ--APPPPPPPPQQ-GAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPG

Query:  TQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG
         +   PP PPPP     +G   PPPPPP  G
Subjt:  TQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG

Sequences

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CDS sequence

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ATGAAATGGGCCTTGGCCCAAACTTGTCCTTCAAATTTCAGACCGTACAGAACTTTCACTTCGGCGATTCGCTTAGATAAACAGAGAAAGGGGGTTTTAGGTCGCCGGAA
GGACGAAGAAGCTTTATCAGTCGGAAATCGGGATCCGGTAAAGAAGCAACGCCGAAGTTCGACGGCGATGGATAGAGAGTGGGGGTCGAAGCCGGGAAGTGGAGGAGCGG
CCTCGGCACAAAATGAAGCTATCGATCGCAGAGAGCGTCTTCGACGGCTGGCTCTCGAGACCATCGATCTCGCCAAGGATCCCTATTTTATGCGGAATCATCTTGGAAGT
TATGAGTGTAAGCTTTGCTTGACTCTGCACAACAATGAGGGTAATTACTTGGCGCACACGCAGGGGAAGCGGCATCAGACTAATTTGGCTAAGAGGGCTGCCCGTGAAGC
CAAGGAGGCTCCTGCTCAACCTCAACCCCACAAGCGGAAGAACAATAGGAACAGTGAGGTTAAGATTCCTGCTTTTAAGTCAAGTAACATTCAAAGTTGGAAATGGCCAG
TGTTCCGGGTTAAAATTGGAAGGCCTGGTTATCGAGTTACAAAGCAATTTGATTCTGAGACAAAGCAGAGATCTCTCCTTTTTCAGATTGAATATCCTGAAATTGAAGAC
CTAGCAAAGCCTAGGCATCGTTTTATGTCCTCTTACGAACAGCGTGTGCAACCTTTTGACAAAAGATACCAATATCTTCTGTTTGCAGCTGAACCATATGAGATAATTGC
ATTCAAGAAATTAGAGTACATTTTTGTTATTCATTTGACACTCTTAGCCCTTTACCTACAATTAAGCTGTATCTTAGGAATTTGGCTTTTGCCCCTGCAATTGTATTTCA
AATCCAAGCCACAAGAGGCAAACAAGCCACCACCTGTGCCTGCAGCCAACGGAACAATGCCATCTGCTGCACCACCAAGGCCATTGCCGCCGCCACCACAAGCTCCACCA
CCGCCACCACCTCCACCACAGCAAGGAGCACCACCAAGAGTCCCTCCCCCTCCGATGCCTGGGTCCTTGCCACCTCCCCCTTCTGTAATGGCCAATGGTCCTCCTAGGCC
AATGCCTCCTGGTGGGGCTCCGCCCATCCCTCCGCCACCTCCAGTTGGTAATAACACAATGGCGAATTTCACTCCTGGTACTCAGATGAATCGACCTCCCATGCCACCTC
CCCCACAGGGCTTCCCAGGTCAGGGTATCCGACAGCCGCCGCCACCACCACCCAATATGGGCTAG

mRNA sequence

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Protein sequence

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MKWALAQTCPSNFRPYRTFTSAIRLDKQRKGVLGRRKDEEALSVGNRDPVKKQRRSSTAMDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGS
YECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKNNRNSEVKIPAFKSSNIQSWKWPVFRVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIED
LAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKKLEYIFVIHLTLLALYLQLSCILGIWLLPLQLYFKSKPQEANKPPPVPAANGTMPSAAPPRPLPPPPQAPP
PPPPPPQQGAPPRVPPPPMPGSLPPPPSVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRPPMPPPPQGFPGQGIRQPPPPPPNMG

CmUC10G200900 (gene) of Watermelon (USVL531) v1 genome