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CmUC10G201750 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC10G201750
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionprotein MODIFIER OF SNC1 11-like
Genome locationCmU531Chr10:33598439..33599284
RNA-Seq ExpressionCmUC10G201750
SyntenyCmUC10G201750
Gene Ontology termsGO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040746 - THO1_MOS11, C-terminal domain
IPR044209 - Protein MODIFIER OF SNC1 11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017329.1 Protein MODIFIER OF SNC1 11 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-5172.84Show/hide
Query:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRF-----------SATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEA
        MATDFTEELSEN+LPGPK  L L+L  AAA N Q+DQH+NRR            +ATKEG E QR  +GR  E+HAS FDIFKKIRRAERFGIPV LSEA
Subjt:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRF-----------SATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEA

Query:  EKRFSRAERFGTDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL
        EKRFSRAERFG DSVCGPDE+ KAEELKRKARA+RFELL   MATDEEAKKKARL RF+ FL
Subjt:  EKRFSRAERFGTDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL

XP_008442609.1 PREDICTED: protein MODIFIER OF SNC1 11-like isoform X1 [Cucumis melo]2.0e-5580.13Show/hide
Query:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRFSATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEAEKRFSRAERFG
        MATDF EELSEN+LPGPK TL LD    AA N  +DQH+NR  SATKEG E Q  AVGRIPE HAS FDIFKKIRRAERFGIPV LSEAEKRFSRAERFG
Subjt:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRFSATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEAEKRFSRAERFG

Query:  TDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL
         DSVCGPDE+AKAEELKRKARA+RFELL   MATDEEAKKKARLARFA +L
Subjt:  TDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL

XP_011651924.1 protein MODIFIER OF SNC1 11 isoform X1 [Cucumis sativus]3.2e-5378.15Show/hide
Query:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRFSATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEAEKRFSRAERFG
        MATDFT+ELS+N+LPGPK TL L    AAA N  +DQH+NRR   TKEG E Q  AVGRIPE HAS FDIFKKIRRAERFGIPV LSEAEKRFSRAERFG
Subjt:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRFSATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEAEKRFSRAERFG

Query:  TDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL
         DSVCGPDE+AKAEELKRKARA+RFELL   +ATDEEAKKKARLARFA  L
Subjt:  TDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL

XP_023527279.1 protein MODIFIER OF SNC1 11-like [Cucurbita pepo subsp. pepo]1.0e-5172.84Show/hide
Query:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRF-----------SATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEA
        MATDF+EELSEN+LPGPK  L L+L  AAA N Q+DQH+NRR            +ATKEG E QR A+GR  E+HAS FDIFKKIRRAERFGIPV LSEA
Subjt:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRF-----------SATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEA

Query:  EKRFSRAERFGTDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL
        EKRFSRAERFG DSVCGPDE+ KAEELKRKARA+RFELL   MATDEEAKKKARL RF+ FL
Subjt:  EKRFSRAERFGTDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL

XP_038904188.1 protein MODIFIER OF SNC1 11-like [Benincasa hispida]5.8e-5580.39Show/hide
Query:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRFSA--TKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEAEKRFSRAER
        MAT+FTEELSEN+LPGPK TL L+L FAAA N Q+DQH+NRR SA  TKE  E Q  AVGRIPEYH S FDIFKKIRRAERFGIPV LSEAEKRFSRAER
Subjt:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRFSA--TKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEAEKRFSRAER

Query:  FGTDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL
        FG DSVCGPDE+ KAEELKRKARA+RFELL   MAT EEAKKKARLARFA FL
Subjt:  FGTDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL

TrEMBL top hitse value%identityAlignment
A0A0A0LDV0 Tho1_MOS11_C domain-containing protein1.5e-5378.15Show/hide
Query:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRFSATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEAEKRFSRAERFG
        MATDFT+ELS+N+LPGPK TL L    AAA N  +DQH+NRR   TKEG E Q  AVGRIPE HAS FDIFKKIRRAERFGIPV LSEAEKRFSRAERFG
Subjt:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRFSATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEAEKRFSRAERFG

Query:  TDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL
         DSVCGPDE+AKAEELKRKARA+RFELL   +ATDEEAKKKARLARFA  L
Subjt:  TDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL

A0A1S3B640 protein MODIFIER OF SNC1 11-like isoform X19.7e-5680.13Show/hide
Query:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRFSATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEAEKRFSRAERFG
        MATDF EELSEN+LPGPK TL LD    AA N  +DQH+NR  SATKEG E Q  AVGRIPE HAS FDIFKKIRRAERFGIPV LSEAEKRFSRAERFG
Subjt:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRFSATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEAEKRFSRAERFG

Query:  TDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL
         DSVCGPDE+AKAEELKRKARA+RFELL   MATDEEAKKKARLARFA +L
Subjt:  TDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL

A0A5D3DNB7 Protein MODIFIER OF SNC1 11-like isoform X19.7e-5680.13Show/hide
Query:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRFSATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEAEKRFSRAERFG
        MATDF EELSEN+LPGPK TL LD    AA N  +DQH+NR  SATKEG E Q  AVGRIPE HAS FDIFKKIRRAERFGIPV LSEAEKRFSRAERFG
Subjt:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRFSATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEAEKRFSRAERFG

Query:  TDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL
         DSVCGPDE+AKAEELKRKARA+RFELL   MATDEEAKKKARLARFA +L
Subjt:  TDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL

A0A6J1F8Q7 protein MODIFIER OF SNC1 11-like1.4e-5172.22Show/hide
Query:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRF-----------SATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEA
        MATDFTEELSEN+LPGPK  L L+L  AAA N Q+DQH+NRR            +ATKEG E QR  +GR  E+HAS FDIFKKIRRAERFGIPV LSEA
Subjt:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRF-----------SATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEA

Query:  EKRFSRAERFGTDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL
        EKRFSRAERFG DSVCGPDE+ KAEELKRKARA+RFELL   +ATDEEAKKKARL RF+ FL
Subjt:  EKRFSRAERFGTDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL

A0A6J1J7D8 protein MODIFIER OF SNC1 11-like1.4e-5172.22Show/hide
Query:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRF-----------SATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEA
        MATDFTEELSEN+LPGPK  L L+L  AAA N Q+DQH+NRR            +ATKEG E +R  +GR  E+HAS FDIFKKIRRAERFGIPV LSEA
Subjt:  MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRF-----------SATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEA

Query:  EKRFSRAERFGTDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL
        EKRFSRAERFG DSVCGPDE+ KAEELKRKARA+RFELL   MATDEEAKKKARL RF+ FL
Subjt:  EKRFSRAERFGTDSVCGPDEIAKAEELKRKARADRFELL---MATDEEAKKKARLARFASFL

SwissProt top hitse value%identityAlignment
Q9LZ08 Protein MODIFIER OF SNC1 111.1e-1665.88Show/hide
Query:  DIFKKIRRAERFGIPVHLSEAEKRFSRAERFGTDS---VCGPDEIAKAEELKRKARADRFELLMA------TDEEAKKKARLARF
        DI KKIRRAERFG+ V L+E EKR SRAERFGT +   V G +   KAEELKRKARADRF +  A      T+EEAKKKARLARF
Subjt:  DIFKKIRRAERFGIPVHLSEAEKRFSRAERFGTDS---VCGPDEIAKAEELKRKARADRFELLMA------TDEEAKKKARLARF

Arabidopsis top hitse value%identityAlignment
AT5G02770.1 unknown protein7.9e-1865.88Show/hide
Query:  DIFKKIRRAERFGIPVHLSEAEKRFSRAERFGTDS---VCGPDEIAKAEELKRKARADRFELLMA------TDEEAKKKARLARF
        DI KKIRRAERFG+ V L+E EKR SRAERFGT +   V G +   KAEELKRKARADRF +  A      T+EEAKKKARLARF
Subjt:  DIFKKIRRAERFGIPVHLSEAEKRFSRAERFGTDS---VCGPDEIAKAEELKRKARADRFELLMA------TDEEAKKKARLARF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCGATTTCACAGAAGAACTGAGCGAAAACTCTCTTCCAGGACCAAAACCAACCCTTCAGCTAGATTTAGAATTCGCAGCCGCTTGTAATGACCAACTAGATCA
ACACCGAAATCGCCGTTTCTCCGCTACAAAGGAAGGCGCTGAATGTCAACGTCCCGCCGTGGGGAGAATACCGGAGTATCATGCTTCTTTCTTTGATATTTTCAAGAAGA
TCCGTCGTGCGGAGCGGTTCGGGATTCCCGTACATTTATCGGAGGCGGAAAAGAGATTCTCTCGAGCTGAGAGGTTCGGCACTGATTCAGTGTGTGGACCAGATGAAATA
GCTAAAGCAGAGGAACTGAAGAGAAAGGCAAGAGCAGACAGATTTGAGCTCTTAATGGCTACTGACGAGGAGGCAAAGAAGAAAGCTCGGCTTGCCAGATTTGCCTCATT
TTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCGATTTCACAGAAGAACTGAGCGAAAACTCTCTTCCAGGACCAAAACCAACCCTTCAGCTAGATTTAGAATTCGCAGCCGCTTGTAATGACCAACTAGATCA
ACACCGAAATCGCCGTTTCTCCGCTACAAAGGAAGGCGCTGAATGTCAACGTCCCGCCGTGGGGAGAATACCGGAGTATCATGCTTCTTTCTTTGATATTTTCAAGAAGA
TCCGTCGTGCGGAGCGGTTCGGGATTCCCGTACATTTATCGGAGGCGGAAAAGAGATTCTCTCGAGCTGAGAGGTTCGGCACTGATTCAGTGTGTGGACCAGATGAAATA
GCTAAAGCAGAGGAACTGAAGAGAAAGGCAAGAGCAGACAGATTTGAGCTCTTAATGGCTACTGACGAGGAGGCAAAGAAGAAAGCTCGGCTTGCCAGATTTGCCTCATT
TTTATAG
Protein sequenceShow/hide protein sequence
MATDFTEELSENSLPGPKPTLQLDLEFAAACNDQLDQHRNRRFSATKEGAECQRPAVGRIPEYHASFFDIFKKIRRAERFGIPVHLSEAEKRFSRAERFGTDSVCGPDEI
AKAEELKRKARADRFELLMATDEEAKKKARLARFASFL