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CmUC11G207360 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC11G207360
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionIntegrase, catalytic core
Genome locationCmU531Chr11:3756167..3757227
RNA-Seq ExpressionCmUC11G207360
SyntenyCmUC11G207360
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037350.1 Integrase, catalytic core [Cucumis melo var. makuwa]7.0e-0561.9Show/hide
Query:  SRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS
        SRYV A LATFE+P TYE+ SQ+IQWRK MEE+ +AL ++ +
Subjt:  SRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS

KAA0046986.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.1e-1855.79Show/hide
Query:  EEMGQWQQAPVEREDLSKENHEEKELRAQSPWQIGVHDQQPPSQRLTKQRKSNSRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS
        EE+ Q QQAP E E+ + E+ EE+++R QSPWQ G+++Q+P  +R T+ RK NSRYV+A LATFE+P TYE+ SQ+IQWRKAMEE+ D L ++ +
Subjt:  EEMGQWQQAPVEREDLSKENHEEKELRAQSPWQIGVHDQQPPSQRLTKQRKSNSRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS

KAA0061433.1 Integrase, catalytic core [Cucumis melo var. makuwa]2.7e-0459.52Show/hide
Query:  SRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS
        SR+V   LATFE+P TYE+ SQ+IQWRKAMEE+ D L ++ +
Subjt:  SRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS

TYK19342.1 integrase [Cucumis melo var. makuwa]2.4e-0554.55Show/hide
Query:  PPSQRLTKQRKSNSRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS
        P S++LTK  KS  +     LATFE+P+TYE+ASQ+IQWR+AMEE+ DAL ++ +
Subjt:  PPSQRLTKQRKSNSRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS

TYK21511.1 Integrase, catalytic core [Cucumis melo var. makuwa]7.0e-0561.9Show/hide
Query:  SRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS
        SR+V A LATFE+P TYE+ SQ+IQWRKAMEE+ D L ++ +
Subjt:  SRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS

TrEMBL top hitse value%identityAlignment
A0A5A7T1U9 Integrase, catalytic core3.4e-0561.9Show/hide
Query:  SRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS
        SRYV A LATFE+P TYE+ SQ+IQWRK MEE+ +AL ++ +
Subjt:  SRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS

A0A5A7TYD2 Integrase, catalytic core5.4e-1955.79Show/hide
Query:  EEMGQWQQAPVEREDLSKENHEEKELRAQSPWQIGVHDQQPPSQRLTKQRKSNSRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS
        EE+ Q QQAP E E+ + E+ EE+++R QSPWQ G+++Q+P  +R T+ RK NSRYV+A LATFE+P TYE+ SQ+IQWRKAMEE+ D L ++ +
Subjt:  EEMGQWQQAPVEREDLSKENHEEKELRAQSPWQIGVHDQQPPSQRLTKQRKSNSRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS

A0A5A7UZQ7 Integrase, catalytic core1.3e-0459.52Show/hide
Query:  SRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS
        SR+V   LATFE+P TYE+ SQ+IQWRKAMEE+ D L ++ +
Subjt:  SRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS

A0A5D3D739 Integrase1.2e-0554.55Show/hide
Query:  PPSQRLTKQRKSNSRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS
        P S++LTK  KS  +     LATFE+P+TYE+ASQ+IQWR+AMEE+ DAL ++ +
Subjt:  PPSQRLTKQRKSNSRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS

A0A5D3DCW1 Integrase, catalytic core3.4e-0561.9Show/hide
Query:  SRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS
        SR+V A LATFE+P TYE+ SQ+IQWRKAMEE+ D L ++ +
Subjt:  SRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGATGGGCCAATGGCAACAAGCTCCAGTAGAAAGAGAAGATCTTTCAAAAGAGAACCACGAAGAAAAAGAACTAAGGGCACAAAGTCCTTGGCAAATTGGTGT
ACATGATCAACAACCACCATCACAAAGATTAACCAAACAAAGAAAATCAAATTCCAGATATGTGAGTGCAACATTAGCAACATTTGAAAAGCCATTGACATATGAAGATG
CATCACAGAATATCCAATGGAGAAAGGCCATGGAAGAACAAGAGGACGCATTGAGCAGACATCGAAGTTGCTCTGGTGACAAAAATTTCCGAGTAGTATGTCCTACTATT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGATGGGCCAATGGCAACAAGCTCCAGTAGAAAGAGAAGATCTTTCAAAAGAGAACCACGAAGAAAAAGAACTAAGGGCACAAAGTCCTTGGCAAATTGGTGT
ACATGATCAACAACCACCATCACAAAGATTAACCAAACAAAGAAAATCAAATTCCAGATATGTGAGTGCAACATTAGCAACATTTGAAAAGCCATTGACATATGAAGATG
CATCACAGAATATCCAATGGAGAAAGGCCATGGAAGAACAAGAGGACGCATTGAGCAGACATCGAAGTTGCTCTGGTGACAAAAATTTCCGAGTAGTATGTCCTACTATT
TAA
Protein sequenceShow/hide protein sequence
MEEMGQWQQAPVEREDLSKENHEEKELRAQSPWQIGVHDQQPPSQRLTKQRKSNSRYVSATLATFEKPLTYEDASQNIQWRKAMEEQEDALSRHRSCSGDKNFRVVCPTI