; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC11G209930 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC11G209930
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionRibosomal protein L2
Genome locationCmU531Chr11:6395673..6396498
RNA-Seq ExpressionCmUC11G209930
SyntenyCmUC11G209930
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QBK32782.1 ribosomal protein L2 [Cynanchum auriculatum]1.4e-0862.5Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR
        +RIKRKA LSWQSF+RQETL LVG SEHNESK +MDQGSLP   +   EG    ++  TC+V R
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR

QOS02873.1 ribosomal protein L2 [Neolamarckia cadamba]8.0e-0962.5Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR
        +RIKRKA LSWQSF+RQETL LVG SEHNESK +MDQGSLP   +   EG    ++  TC+V R
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR

QXU75677.1 ribosomal protein L2 [Hoya lithophytica]1.4e-0862.5Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR
        +RIKRKA LSWQSF+RQETL LVG SEHNESK +MDQGSLP   +   EG    ++  TC+V R
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR

WP_131796642.1 hypothetical protein [Candidatus Frankia datiscae]1.6e-0983.33Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPG
        +RIKRKA LSWQSF+RQETL LVGG+EHNESK E DQGSLPG
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPG

YP_009041170.1 ribosomal protein L2 [Rhazya stricta]8.0e-0962.5Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR
        +RIKRKA LSWQSF+RQETL LVG SEHNESK +MDQGSLP   +   EG    ++  TC+V R
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR

TrEMBL top hitse value%identityAlignment
A0A060D4X5 Ribosomal protein L23.9e-0962.5Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR
        +RIKRKA LSWQSF+RQETL LVG SEHNESK +MDQGSLP   +   EG    ++  TC+V R
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR

A0A3G1SU26 Ribosomal protein L26.6e-0962.5Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR
        +RIKRKA LSWQSF+RQETL LVG SEHNESK +MDQGSLP   +   EG    ++  TC+V R
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR

A0A481X332 Ribosomal protein L26.6e-0962.5Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR
        +RIKRKA LSWQSF+RQETL LVG SEHNESK +MDQGSLP   +   EG    ++  TC+V R
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR

A0A481X5C3 Ribosomal protein L26.6e-0962.5Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR
        +RIKRKA LSWQSF+RQETL LVG SEHNESK +MDQGSLP   +   EG    ++  TC+V R
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR

A0A7M1VF26 Ribosomal protein L23.9e-0962.5Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR
        +RIKRKA LSWQSF+RQETL LVG SEHNESK +MDQGSLP   +   EG    ++  TC+V R
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTR

SwissProt top hitse value%identityAlignment
P0C8K6 60S ribosomal protein L2, mitochondrial6.4e-0972.5Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSL
        +RIKRKA LSWQS ++Q+TLELVG +EHNESK + DQGSL
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSL

P92812 60S ribosomal protein L2, mitochondrial6.4e-0972.5Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSL
        +RIKRKA LSWQS ++Q+TLELVG +EHNESK + DQGSL
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSL

P93311 60S ribosomal protein L2, mitochondrial7.8e-0763.41Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLP
        +RIK KA LSWQSF+RQ+TL LVG + H +SK + DQG+LP
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLP

Q2F969 60S ribosomal protein L2, mitochondrial6.4e-0972.5Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSL
        +RIKRKA LSWQS ++Q+TLELVG +EHNESK + DQGSL
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSL

Arabidopsis top hitse value%identityAlignment
AT2G07715.1 Nucleic acid-binding, OB-fold-like protein5.6e-0863.41Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLP
        +RIK KA LSWQSF+RQ+TL LVG + H +SK + DQG+LP
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLP

ATMG00560.1 Nucleic acid-binding, OB-fold-like protein5.6e-0863.41Show/hide
Query:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLP
        +RIK KA LSWQSF+RQ+TL LVG + H +SK + DQG+LP
Subjt:  NRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGCCAAGCAATAAGTGTGGGCCATGGTATTCAGAAGGCATTTTACAACAACAACAGGATCAAACGTAAAGCTACGCTTTCTTGGCAGAGTTTTAAGCGG
CAAGAGACTTTAGAGCTCGTTGGAGGTTCTGAGCATAACGAATCGAAAACAGAGATGGATCAAGGTAGCTTACCTGGACTTGGCAGGCAAAGGGCCGAAGGATGG
AGCGTGCAAAGTCAATCGTGCACCTGCCGTGTGACCCGTTGGTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGCCAAGCAATAAGTGTGGGCCATGGTATTCAGAAGGCATTTTACAACAACAACAGGATCAAACGTAAAGCTACGCTTTCTTGGCAGAGTTTTAAGCGG
CAAGAGACTTTAGAGCTCGTTGGAGGTTCTGAGCATAACGAATCGAAAACAGAGATGGATCAAGGTAGCTTACCTGGACTTGGCAGGCAAAGGGCCGAAGGATGG
AGCGTGCAAAGTCAATCGTGCACCTGCCGTGTGACCCGTTGGTCCTAA
Protein sequenceShow/hide protein sequence
MWGQAISVGHGIQKAFYNNNRIKRKATLSWQSFKRQETLELVGGSEHNESKTEMDQGSLPGLGRQRAEGWSVQSQSCTCRVTRWS