; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC11G209940 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC11G209940
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionEnzymatic polyprotein
Genome locationCmU531Chr11:6403376..6404324
RNA-Seq ExpressionCmUC11G209940
SyntenyCmUC11G209940
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050446.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.8e-3746.67Show/hide
Query:  QEPDMVSQLIYMCTKHFLGR--TVVYSNQTTEVLL----GIRDTKHNRKVIKDPDYRKELGTFCEQYGLDN--MLPSSKTKKNSLKKLYRKDKRRLQNGE
        +EPDMV+QL+Y  TKHF+G    + Y + ++ V +       + KH  KVIKD DYRKELGTFC+QYGL        +K KK S KKL+R++K + Q   
Subjt:  QEPDMVSQLIYMCTKHFLGR--TVVYSNQTTEVLL----GIRDTKHNRKVIKDPDYRKELGTFCEQYGLDN--MLPSSKTKKNSLKKLYRKDKRRLQNGE

Query:  NSRKKRYYKRNKN-RRYLKRDN-VCFKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDDMSISEESSS-NDMINEIR-EESTEDESSNSCSDC
          RKK YY ++K+ +RY  + N +CFKC + GHYAN+C LK +I  L ID    QSLLY  + DDD S   ESSS  D IN +R EES+ +E   S S+ 
Subjt:  NSRKKRYYKRNKN-RRYLKRDN-VCFKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDDMSISEESSS-NDMINEIR-EESTEDESSNSCSDC

Query:  REDD-AIPCT-RC-------IKVLPRDQEFLLDLVEEIPDAQLRKTILTKLRDTL
         +D+ AI CT RC       I V+ +DQE L DL+E+IPD + ++T L KLR +L
Subjt:  REDD-AIPCT-RC-------IKVLPRDQEFLLDLVEEIPDAQLRKTILTKLRDTL

KAA0052109.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.1e-3537.27Show/hide
Query:  QEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIR----------------------------------------------------------------
        +EPDMV+QL+Y  TKHF+G T ++ N  TE LLG++                                                                
Subjt:  QEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIR----------------------------------------------------------------

Query:  -----------------DTKHNRKVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN---SLKKLYRKDKRRLQNGENSRKKRYYKRNKNRRYLKRDN-VC
                         + KH  KVIKD DYRKELGTFC+QYGL       K KK    S KK +RK K + Q     R+  YYK    ++Y  + N +C
Subjt:  -----------------DTKHNRKVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN---SLKKLYRKDKRRLQNGENSRKKRYYKRNKNRRYLKRDN-VC

Query:  FKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDDMSISEESSS-NDMINEIREE-STEDESSNSCSDCREDD-AIPCT-RC-------IKVLP
        FKC + GHYAN+C LK KIN L ID    QSLLY  R+DDD S   ESSS  D IN ++EE S+ +E   S SD  +D+ AIPCT RC       I V+ 
Subjt:  FKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDDMSISEESSS-NDMINEIREE-STEDESSNSCSDCREDD-AIPCT-RC-------IKVLP

Query:  RDQEFLLDLVEEIPDAQLRKTILTKLRDTL
        +DQE L  L+E+IPD + ++T L KL+ +L
Subjt:  RDQEFLLDLVEEIPDAQLRKTILTKLRDTL

KAA0056776.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.4e-3436.67Show/hide
Query:  QEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIR----------------------------------------------------------------
        +EPDMV+QL+Y  TKHF+G T ++ N  TE LLG++                                                                
Subjt:  QEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIR----------------------------------------------------------------

Query:  -----------------DTKHNRKVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN---SLKKLYRKDKRRLQNGENSRKKRYYKRNKNRRY-LKRDNVC
                         + KH  KVIKD DYRKELGTFC+QYGL       K KK    S KK +RK K + Q     R++ Y K    + Y  K   +C
Subjt:  -----------------DTKHNRKVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN---SLKKLYRKDKRRLQNGENSRKKRYYKRNKNRRY-LKRDNVC

Query:  FKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDD-MSISEESSSNDMINEIREE-STEDESSNSCSDCREDD-AIPCT-RC-------IKVLP
        FKC + GHYAN+C LK KIN + ID    QSLLY  R DDD  S +E SS  D IN ++EE S+ +E   S SD  +D+ AIPCT RC       I V+ 
Subjt:  FKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDD-MSISEESSSNDMINEIREE-STEDESSNSCSDCREDD-AIPCT-RC-------IKVLP

Query:  RDQEFLLDLVEEIPDAQLRKTILTKLRDTL
        +DQE L DL+E+IPD + ++T L KL+ +L
Subjt:  RDQEFLLDLVEEIPDAQLRKTILTKLRDTL

TYJ97599.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.1e-3436.97Show/hide
Query:  QEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIR----------------------------------------------------------------
        +EPDMV+QL+Y  TKHF+G T ++ N  TE LLG++                                                                
Subjt:  QEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIR----------------------------------------------------------------

Query:  -----------------DTKHNRKVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN---SLKKLYRKDKRRLQNGENSRKKRYYKRNKNRRY-LKRDNVC
                         + KH  KVIKD DYRKELGTFC+QYGL       K KK    S KK +RK K + Q     RK+ Y K    + Y  K   +C
Subjt:  -----------------DTKHNRKVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN---SLKKLYRKDKRRLQNGENSRKKRYYKRNKNRRY-LKRDNVC

Query:  FKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDD-MSISEESSSNDMINEIREE-STEDESSNSCSDCREDD-AIPCT-RC-------IKVLP
        FKC + GHYAN+C LK KIN + ID    QSLLY  R DDD  S +E SS  D IN ++EE S+ +E   S SD  +D+ AIPCT RC       I V+ 
Subjt:  FKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDD-MSISEESSSNDMINEIREE-STEDESSNSCSDCREDD-AIPCT-RC-------IKVLP

Query:  RDQEFLLDLVEEIPDAQLRKTILTKLRDTL
        +DQE L DL+E+IPD + ++T L KL+ +L
Subjt:  RDQEFLLDLVEEIPDAQLRKTILTKLRDTL

TYJ98087.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.1e-3537.27Show/hide
Query:  QEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIR----------------------------------------------------------------
        +EPDMV+QL+Y  TKHF+G T ++ N  TE LLG++                                                                
Subjt:  QEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIR----------------------------------------------------------------

Query:  -----------------DTKHNRKVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN---SLKKLYRKDKRRLQNGENSRKKRYYKRNKNRRYLKRDN-VC
                         + KH  KVIKD DYRKELGTFC+QYGL       K KK    S KK +RK K + Q     R+  YYK    ++Y  + N +C
Subjt:  -----------------DTKHNRKVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN---SLKKLYRKDKRRLQNGENSRKKRYYKRNKNRRYLKRDN-VC

Query:  FKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDDMSISEESSS-NDMINEIREE-STEDESSNSCSDCREDD-AIPCT-RC-------IKVLP
        FKC + GHYAN+C LK KIN L ID    QSLLY  R+DDD S   ESSS  D IN ++EE S+ +E   S SD  +D+ AIPCT RC       I V+ 
Subjt:  FKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDDMSISEESSS-NDMINEIREE-STEDESSNSCSDCREDD-AIPCT-RC-------IKVLP

Query:  RDQEFLLDLVEEIPDAQLRKTILTKLRDTL
        +DQE L  L+E+IPD + ++T L KL+ +L
Subjt:  RDQEFLLDLVEEIPDAQLRKTILTKLRDTL

TrEMBL top hitse value%identityAlignment
A0A0A0LWY2 CCHC-type domain-containing protein1.2e-3644.19Show/hide
Query:  TQEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIRDTKHNR---------KVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN-----SLKKLYRKDK
        T+EPDM++QL+Y  TKHF+G T ++ N  TE LLG++  K +R            KD DYRKELGTF +QYGL N     K KK      S   ++RK K
Subjt:  TQEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIRDTKHNR---------KVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN-----SLKKLYRKDK

Query:  RRLQNGENSRKKRYYKRNKNRRYL--KRDNVCFKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDDMSISEESS-SNDMINEIREE-STEDES
         +  +    R+K  Y++ K+++Y   K   +C+KC ++GHYAN+C L+ +IN L+ID    QSLLY  R DDD S   ESS   D IN ++EE S+  E 
Subjt:  RRLQNGENSRKKRYYKRNKNRRYL--KRDNVCFKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDDMSISEESS-SNDMINEIREE-STEDES

Query:  SNSCSDCREDD-AIPCTR-C---IKVLPRDQEFLLDLVEEIPDAQLRKTILTKLRDTL
          S SD  +D+ AIPCTR C   I V+ +DQE L DL+E+IPD   ++T L KLR ++
Subjt:  SNSCSDCREDD-AIPCTR-C---IKVLPRDQEFLLDLVEEIPDAQLRKTILTKLRDTL

A0A5A7U8D3 Enzymatic polyprotein8.5e-3846.67Show/hide
Query:  QEPDMVSQLIYMCTKHFLGR--TVVYSNQTTEVLL----GIRDTKHNRKVIKDPDYRKELGTFCEQYGLDN--MLPSSKTKKNSLKKLYRKDKRRLQNGE
        +EPDMV+QL+Y  TKHF+G    + Y + ++ V +       + KH  KVIKD DYRKELGTFC+QYGL        +K KK S KKL+R++K + Q   
Subjt:  QEPDMVSQLIYMCTKHFLGR--TVVYSNQTTEVLL----GIRDTKHNRKVIKDPDYRKELGTFCEQYGLDN--MLPSSKTKKNSLKKLYRKDKRRLQNGE

Query:  NSRKKRYYKRNKN-RRYLKRDN-VCFKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDDMSISEESSS-NDMINEIR-EESTEDESSNSCSDC
          RKK YY ++K+ +RY  + N +CFKC + GHYAN+C LK +I  L ID    QSLLY  + DDD S   ESSS  D IN +R EES+ +E   S S+ 
Subjt:  NSRKKRYYKRNKN-RRYLKRDN-VCFKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDDMSISEESSS-NDMINEIR-EESTEDESSNSCSDC

Query:  REDD-AIPCT-RC-------IKVLPRDQEFLLDLVEEIPDAQLRKTILTKLRDTL
         +D+ AI CT RC       I V+ +DQE L DL+E+IPD + ++T L KLR +L
Subjt:  REDD-AIPCT-RC-------IKVLPRDQEFLLDLVEEIPDAQLRKTILTKLRDTL

A0A5A7UF59 Enzymatic polyprotein1.0e-3537.27Show/hide
Query:  QEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIR----------------------------------------------------------------
        +EPDMV+QL+Y  TKHF+G T ++ N  TE LLG++                                                                
Subjt:  QEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIR----------------------------------------------------------------

Query:  -----------------DTKHNRKVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN---SLKKLYRKDKRRLQNGENSRKKRYYKRNKNRRYLKRDN-VC
                         + KH  KVIKD DYRKELGTFC+QYGL       K KK    S KK +RK K + Q     R+  YYK    ++Y  + N +C
Subjt:  -----------------DTKHNRKVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN---SLKKLYRKDKRRLQNGENSRKKRYYKRNKNRRYLKRDN-VC

Query:  FKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDDMSISEESSS-NDMINEIREE-STEDESSNSCSDCREDD-AIPCT-RC-------IKVLP
        FKC + GHYAN+C LK KIN L ID    QSLLY  R+DDD S   ESSS  D IN ++EE S+ +E   S SD  +D+ AIPCT RC       I V+ 
Subjt:  FKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDDMSISEESSS-NDMINEIREE-STEDESSNSCSDCREDD-AIPCT-RC-------IKVLP

Query:  RDQEFLLDLVEEIPDAQLRKTILTKLRDTL
        +DQE L  L+E+IPD + ++T L KL+ +L
Subjt:  RDQEFLLDLVEEIPDAQLRKTILTKLRDTL

A0A5D3BEY3 Enzymatic polyprotein5.1e-3536.97Show/hide
Query:  QEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIR----------------------------------------------------------------
        +EPDMV+QL+Y  TKHF+G T ++ N  TE LLG++                                                                
Subjt:  QEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIR----------------------------------------------------------------

Query:  -----------------DTKHNRKVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN---SLKKLYRKDKRRLQNGENSRKKRYYKRNKNRRY-LKRDNVC
                         + KH  KVIKD DYRKELGTFC+QYGL       K KK    S KK +RK K + Q     RK+ Y K    + Y  K   +C
Subjt:  -----------------DTKHNRKVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN---SLKKLYRKDKRRLQNGENSRKKRYYKRNKNRRY-LKRDNVC

Query:  FKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDD-MSISEESSSNDMINEIREE-STEDESSNSCSDCREDD-AIPCT-RC-------IKVLP
        FKC + GHYAN+C LK KIN + ID    QSLLY  R DDD  S +E SS  D IN ++EE S+ +E   S SD  +D+ AIPCT RC       I V+ 
Subjt:  FKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDD-MSISEESSSNDMINEIREE-STEDESSNSCSDCREDD-AIPCT-RC-------IKVLP

Query:  RDQEFLLDLVEEIPDAQLRKTILTKLRDTL
        +DQE L DL+E+IPD + ++T L KL+ +L
Subjt:  RDQEFLLDLVEEIPDAQLRKTILTKLRDTL

A0A5D3BG41 Enzymatic polyprotein1.0e-3537.27Show/hide
Query:  QEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIR----------------------------------------------------------------
        +EPDMV+QL+Y  TKHF+G T ++ N  TE LLG++                                                                
Subjt:  QEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIR----------------------------------------------------------------

Query:  -----------------DTKHNRKVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN---SLKKLYRKDKRRLQNGENSRKKRYYKRNKNRRYLKRDN-VC
                         + KH  KVIKD DYRKELGTFC+QYGL       K KK    S KK +RK K + Q     R+  YYK    ++Y  + N +C
Subjt:  -----------------DTKHNRKVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKN---SLKKLYRKDKRRLQNGENSRKKRYYKRNKNRRYLKRDN-VC

Query:  FKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDDMSISEESSS-NDMINEIREE-STEDESSNSCSDCREDD-AIPCT-RC-------IKVLP
        FKC + GHYAN+C LK KIN L ID    QSLLY  R+DDD S   ESSS  D IN ++EE S+ +E   S SD  +D+ AIPCT RC       I V+ 
Subjt:  FKCTKTGHYANKCSLKQKINNLEID---NQSLLYVTRLDDDMSISEESSS-NDMINEIREE-STEDESSNSCSDCREDD-AIPCT-RC-------IKVLP

Query:  RDQEFLLDLVEEIPDAQLRKTILTKLRDTL
        +DQE L  L+E+IPD + ++T L KL+ +L
Subjt:  RDQEFLLDLVEEIPDAQLRKTILTKLRDTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTGCTACTCAAGAACCTGATATGGTGAGTCAGTTGATTTATATGTGTACTAAACACTTTCTAGGTCGAACTGTTGTTTACAGCAATCAGACAACTGAA
GTACTCTTGGGAATAAGAGATACTAAGCATAATCGAAAAGTCATTAAAGATCCTGATTATCGAAAGGAACTTGGGACTTTTTGCGAGCAATATGGGTTGGATAAT
ATGCTCCCTTCATCAAAAACAAAGAAGAATTCTTTGAAGAAGCTATATCGCAAAGACAAGCGAAGGCTTCAAAATGGAGAAAACTCTCGAAAGAAAAGATACTAC
AAAAGGAACAAGAATAGACGATATCTAAAAAGAGATAACGTTTGCTTCAAATGCACTAAGACGGGTCATTATGCCAACAAATGCTCGTTGAAGCAAAAAATCAAC
AATCTCGAAATAGACAATCAATCTCTTCTCTACGTAACAAGGTTGGATGACGACATGTCAATCTCAGAGGAATCCTCTTCTAATGACATGATAAACGAGATCAGA
GAAGAATCAACTGAAGATGAATCTTCAAATTCTTGCAGCGATTGTAGAGAGGATGATGCAATTCCTTGCACAAGATGTATCAAAGTTCTCCCAAGAGATCAAGAA
TTCTTACTTGATCTGGTTGAAGAAATTCCAGACGCACAGTTGAGGAAAACAATTCTTACAAAGTTAAGAGATACTCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTGCTACTCAAGAACCTGATATGGTGAGTCAGTTGATTTATATGTGTACTAAACACTTTCTAGGTCGAACTGTTGTTTACAGCAATCAGACAACTGAA
GTACTCTTGGGAATAAGAGATACTAAGCATAATCGAAAAGTCATTAAAGATCCTGATTATCGAAAGGAACTTGGGACTTTTTGCGAGCAATATGGGTTGGATAAT
ATGCTCCCTTCATCAAAAACAAAGAAGAATTCTTTGAAGAAGCTATATCGCAAAGACAAGCGAAGGCTTCAAAATGGAGAAAACTCTCGAAAGAAAAGATACTAC
AAAAGGAACAAGAATAGACGATATCTAAAAAGAGATAACGTTTGCTTCAAATGCACTAAGACGGGTCATTATGCCAACAAATGCTCGTTGAAGCAAAAAATCAAC
AATCTCGAAATAGACAATCAATCTCTTCTCTACGTAACAAGGTTGGATGACGACATGTCAATCTCAGAGGAATCCTCTTCTAATGACATGATAAACGAGATCAGA
GAAGAATCAACTGAAGATGAATCTTCAAATTCTTGCAGCGATTGTAGAGAGGATGATGCAATTCCTTGCACAAGATGTATCAAAGTTCTCCCAAGAGATCAAGAA
TTCTTACTTGATCTGGTTGAAGAAATTCCAGACGCACAGTTGAGGAAAACAATTCTTACAAAGTTAAGAGATACTCTATAA
Protein sequenceShow/hide protein sequence
MEAATQEPDMVSQLIYMCTKHFLGRTVVYSNQTTEVLLGIRDTKHNRKVIKDPDYRKELGTFCEQYGLDNMLPSSKTKKNSLKKLYRKDKRRLQNGENSRKKRYY
KRNKNRRYLKRDNVCFKCTKTGHYANKCSLKQKINNLEIDNQSLLYVTRLDDDMSISEESSSNDMINEIREESTEDESSNSCSDCREDDAIPCTRCIKVLPRDQE
FLLDLVEEIPDAQLRKTILTKLRDTL