CuGenDBv2

Gene ID	CmUC11G210980
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Protein Ycf2
Genome location	CmU531Chr11:7668826..7671640
RNA-Seq Expression	CmUC11G210980
Synteny	CmUC11G210980
Gene Ontology terms	GO:0009570 - chloroplast stroma (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	IPR008543 - Uncharacterised protein family Ycf2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ATV96702.1 hypothetical chloroplast RF21 [Couroupita guianensis]

5.2e-34

80.77

Show/hide

Query:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSR
        FF KV+  +SS I +  +   + Q TD NQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKC SGYSSMSR
Subjt:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSR

Query:  LFTD
        LFT+
Subjt:  LFTD

ATV96723.1 hypothetical chloroplast RF21 [Couroupita guianensis]

5.2e-34

80.77

Show/hide

Query:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSR
        FF KV+  +SS I +  +   + Q TD NQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKC SGYSSMSR
Subjt:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSR

Query:  LFTD
        LFT+
Subjt:  LFTD

QIT04093.1 Ycf2 protein [Luffa aegyptiaca]

1.5e-33

79.61

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Query:  FFFKVQAEISSFIAFSHSFRPYSQTDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL
        FF KV+  +S+    S        TD +QLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL
Subjt:  FFFKVQAEISSFIAFSHSFRPYSQTDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL

Query:  FTD
        FT+
Subjt:  FTD

YP_009752033.1 Ycf2 protein [Cionosicys macranthus]

1.5e-33

79.61

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Query:  FFFKVQAEISSFIAFSHSFRPYSQTDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL
        FF KV+  +S+    S        TD +QLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL
Subjt:  FFFKVQAEISSFIAFSHSFRPYSQTDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL

Query:  FTD
        FT+
Subjt:  FTD

YP_010131137.1 hypothetical protein RF2 [Benincasa hispida]

1.5e-33

79.61

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Query:  FFFKVQAEISSFIAFSHSFRPYSQTDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL
        FF KV+  +S+    S        TD +QLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL
Subjt:  FFFKVQAEISSFIAFSHSFRPYSQTDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL

Query:  FTD
        FT+
Subjt:  FTD

TrEMBL top hits

e value

%identity

Alignment

A0A249RYX8 Protein Ycf2

7.3e-34

79.61

Show/hide

Query:  FFFKVQAEISSFIAFSHSFRPYSQTDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL
        FF KV+  +S+    S        TD +QLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL
Subjt:  FFFKVQAEISSFIAFSHSFRPYSQTDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL

Query:  FTD
        FT+
Subjt:  FTD

A0A2H4NTR8 Protein Ycf2

2.5e-34

80.77

Show/hide

Query:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSR
        FF KV+  +SS I +  +   + Q TD NQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKC SGYSSMSR
Subjt:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSR

Query:  LFTD
        LFT+
Subjt:  LFTD

A0A2H4NTS8 Protein Ycf2

2.5e-34

80.77

Show/hide

Query:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSR
        FF KV+  +SS I +  +   + Q TD NQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKC SGYSSMSR
Subjt:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSR

Query:  LFTD
        LFT+
Subjt:  LFTD

A0A2H4T233 Protein Ycf2

7.3e-34

79.61

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Query:  FFFKVQAEISSFIAFSHSFRPYSQTDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL
        FF KV+  +S+    S        TD +QLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL
Subjt:  FFFKVQAEISSFIAFSHSFRPYSQTDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL

Query:  FTD
        FT+
Subjt:  FTD

A0A6H0ET42 Protein Ycf2

7.3e-34

79.61

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Query:  FFFKVQAEISSFIAFSHSFRPYSQTDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL
        FF KV+  +S+    S        TD +QLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL
Subjt:  FFFKVQAEISSFIAFSHSFRPYSQTDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL

Query:  FTD
        FT+
Subjt:  FTD

SwissProt top hits

e value

%identity

Alignment

A0ZZ78 Protein Ycf2

2.9e-35

78.85

Show/hide

Query:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSR
        FF KV+  +SS I +  +   + Q TD  QLKGSSDQSRD FDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKC SGYSSMSR
Subjt:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSR

Query:  LFTD
        LFT+
Subjt:  LFTD

A4GYV4 Protein Ycf2

9.8e-36

78.64

Show/hide

Query:  FFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL
        FF     ISS I +  +   + Q  D +QLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKC SGYSSMSRL
Subjt:  FFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL

Query:  FTD
        FT+
Subjt:  FTD

Q06GT4 Protein Ycf2

7.5e-36

79.81

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Query:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSR
        FF KVQ  +SS I +  +   + Q TD +QLKGSSDQSRDHFDSISNEDSEYHTLINQ EIQQLKERSILWDPSFLQTERTEIESDRFPKC SGYSSMSR
Subjt:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSR

Query:  LFTD
        LFT+
Subjt:  LFTD

Q09FP8 Protein Ycf2

4.4e-36

79.05

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Query:  SFFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMS
        SFF KV+  +SS + +  +   + Q TD +QLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKC SGYSSMS
Subjt:  SFFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMS

Query:  RLFTD
        RLFT+
Subjt:  RLFTD

Q14F97 Protein Ycf2

9.8e-36

78.64

Show/hide

Query:  FFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL
        FF     ISS I +  +   + Q  D +QLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKC SGYSSMSRL
Subjt:  FFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRL

Query:  FTD
        FT+
Subjt:  FTD

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

1.7e-27

68.87

Show/hide

Query:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSE--YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSM
        FF KV+  +SS I +  +   + Q TD +QL GSSDQ  D FDSISNEDSE  YHTLINQREIQQLKERSIL DPSF+QTE  EIESDRFPK  SGYSSM
Subjt:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSE--YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSM

Query:  SRLFTD
         RLFT+
Subjt:  SRLFTD

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

1.7e-27

68.87

Show/hide

Query:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSE--YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSM
        FF KV+  +SS I +  +   + Q TD +QL GSSDQ  D FDSISNEDSE  YHTLINQREIQQLKERSIL DPSF+QTE  EIESDRFPK  SGYSSM
Subjt:  FFFKVQAEISSFIAFSHSFRPYSQ-TDPNQLKGSSDQSRDHFDSISNEDSE--YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSM

Query:  SRLFTD
         RLFT+
Subjt:  SRLFTD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCTAGACTTCCGTATGCGGGCACAAGCACCTGAGCAACAAGAGCCTGATATTGTGAGTAACTCTGGACCTGAGTCAAAAAAATCAGCTACACGAAGCCCTCCTGTCAG
AAAAAAAAGCCCAAGGCCCGGCTATACATACATTTTCAAAAAAAAACTGTCCAAGGCTAATTCTTTTAGGTCTTTCTTCACAATAATTATGCTGATAATTATGATGCAGA
AAATGCCAATTCAAATTAAATGTATTGAAAACGATGTTACTGTATGGATCGGAATTAAAAATCCCCCCAGGACCAAGAAATTACCCGACCCCGTATATCTAATTGGATCC
TCATTATCTAAACAAACCCAAAACATACCATTGGTAAGTGATTCAGTAATTAAACCTTCAGAACTCCTTTTTTGTTCTTTCATTCCAGATGAAACATCTTTCAAAGGAAG
TTCTGTGTATAATTCGAATATCATAAAGATTACCATATATAACACAAAATTTCGCCGCCGATTCCCTGTAGTCGAGCTTCTCGGTCTGTCATTATACCCCGAGAAGGTTA
AAACCCAAAAATCCTTGTTGCTTTCCCGATGTTTCCGTACGTTTTCAATAAAACCTTCTCGTAAAAGTATTTTAACAATGTTTTCGGTGATGTTAGTAGATGGTATTCGA
ACCATTCCTTTTCTATTCATGTCAGCATTGCGAATAGAGGTTATTATGTTAGCAATAGTGTCCTTACCCATGATAAACAAAATTATTGATCGAGCCGTCACTCTTGCGCT
TCACCTGTCATACCCTGACTACACGGAACGAGACAATTCGATTGGCTTCACTCCTTCTGGTAATGGGACAAGTTCCCATGTCTCATTCTTCTTTAAGGTTCAGGCAGAAA
TCTCCTCTTTCATCGCATTCTCCCACTCTTTCAGGCCCTATTCGCAAACTGATCCTAACCAATTGAAAGGATCTTCTGATCAATCCAGAGATCATTTCGATTCCATTAGT
AATGAGGATTCGGAATATCACACATTGATCAATCAAAGAGAGATTCAACAACTAAAAGAAAGATCGATTCTTTGGGATCCTTCCTTTCTTCAAACGGAACGAACAGAGAT
AGAATCAGACCGATTCCCTAAATGCTTTTCTGGATATTCCTCAATGTCCCGGCTATTCACGGATCATTTAAGCTTACTTCTTGGGTAG

mRNA sequence

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Protein sequence

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MLDFRMRAQAPEQQEPDIVSNSGPESKKSATRSPPVRKKSPRPGYTYIFKKKLSKANSFRSFFTIIMLIIMMQKMPIQIKCIENDVTVWIGIKNPPRTKKLPDPVYLIGS
SLSKQTQNIPLVSDSVIKPSELLFCSFIPDETSFKGSSVYNSNIIKITIYNTKFRRRFPVVELLGLSLYPEKVKTQKSLLLSRCFRTFSIKPSRKSILTMFSVMLVDGIR
TIPFLFMSALRIEVIMLAIVSLPMINKIIDRAVTLALHLSYPDYTERDNSIGFTPSGNGTSSHVSFFFKVQAEISSFIAFSHSFRPYSQTDPNQLKGSSDQSRDHFDSIS
NEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTDHLSLLLG

CmUC11G210980 (gene) of Watermelon (USVL531) v1 genome