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CmUC11G211190 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC11G211190
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionRibosomal protein S3
Genome locationCmU531Chr11:7714698..7715386
RNA-Seq ExpressionCmUC11G211190
SyntenyCmUC11G211190
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABO42360.1 ribosomal protein S3, partial [Brexia madagascariensis]2.0e-1896.23Show/hide
Query:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
        GKVGPIGCLHSS+DTEEERNEVRGREA KRVESIRLDDREKQNEIRIWPKKKQ
Subjt:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ

ADC43989.1 ribosomal protein S3, partial [Gymnosporia arbutifolia]2.0e-1896.23Show/hide
Query:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
        GKVGPIGCLHSS+DTEEERNEVRGREA KRVESIRLDDREKQNEIRIWPKKKQ
Subjt:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ

ADL63945.1 ribosomal protein S3, partial [Parnassia grandifolia]2.0e-1896.23Show/hide
Query:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
        GKVGPIGCLHSS+DTEEERNEVRGREA KRVESIRLDDREKQNEIRIWPKKKQ
Subjt:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ

KAB1227956.1 Ribosomal protein S3, mitochondrial [Morella rubra]8.9e-1954.24Show/hide
Query:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQLGQFV----------HVTKRDPFSLIPTPQVLLLWRLASPIRRFTKR
        GKVGPIGCLHSSDDTEEERNEVRGR A KRVESIRLDDREKQNEIRIWPKKKQ    V          H   +     IP  +V  L  L   +R     
Subjt:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQLGQFV----------HVTKRDPFSLIPTPQVLLLWRLASPIRRFTKR

Query:  RGVRCLCQYPPFRDDSCL
              C  PP +   CL
Subjt:  RGVRCLCQYPPFRDDSCL

YP_003587231.1 ribosomal protein S3 [Citrullus lanatus]1.0e-19100Show/hide
Query:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
        GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
Subjt:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ

TrEMBL top hitse value%identityAlignment
A0A6A1WT88 Ribosomal protein S3, mitochondrial4.3e-1954.24Show/hide
Query:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQLGQFV----------HVTKRDPFSLIPTPQVLLLWRLASPIRRFTKR
        GKVGPIGCLHSSDDTEEERNEVRGR A KRVESIRLDDREKQNEIRIWPKKKQ    V          H   +     IP  +V  L  L   +R     
Subjt:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQLGQFV----------HVTKRDPFSLIPTPQVLLLWRLASPIRRFTKR

Query:  RGVRCLCQYPPFRDDSCL
              C  PP +   CL
Subjt:  RGVRCLCQYPPFRDDSCL

A4KYE7 Ribosomal protein S3 (Fragment)9.6e-1996.23Show/hide
Query:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
        GKVGPIGCLHSS+DTEEERNEVRGREA KRVESIRLDDREKQNEIRIWPKKKQ
Subjt:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ

D3GFB7 Ribosomal protein S3 (Fragment)9.6e-1996.23Show/hide
Query:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
        GKVGPIGCLHSS+DTEEERNEVRGREA KRVESIRLDDREKQNEIRIWPKKKQ
Subjt:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ

D3GFB8 Ribosomal protein S3 (Fragment)9.6e-1996.23Show/hide
Query:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
        GKVGPIGCLHSS+DTEEERNEVRGREA KRVESIRLDDREKQNEIRIWPKKKQ
Subjt:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ

D5I3A1 Ribosomal protein S35.1e-20100Show/hide
Query:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
        GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
Subjt:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ

SwissProt top hitse value%identityAlignment
P27754 Ribosomal protein S3, mitochondrial2.9e-2090.91Show/hide
Query:  EVGKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
        E GKVGPIGCLHS+DDTEEERNEV GR A KRVESIRLDDREKQNEIRIWPKKKQ
Subjt:  EVGKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ

P27928 Ribosomal protein S3, mitochondrial1.2e-1584.91Show/hide
Query:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
        GKVGPIGCLHSS+ TEEERNEVRGR A KRVESI   DREKQNEIRIWPKK Q
Subjt:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ

P49386 Ribosomal protein S3, mitochondrial7.3e-1684.91Show/hide
Query:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
        GK GPIGCL   DDTEEERNEVRGR A KRVESIRLDDR+KQNEIR WPKKKQ
Subjt:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ

Q04716 Ribosomal protein S3, mitochondrial3.7e-2094.34Show/hide
Query:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
        GKVGPIGCLHSSD TEEERNEVRGR A KRVESIRLDDREKQNEIRIWPKKKQ
Subjt:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ

Q95749 Ribosomal protein S3, mitochondrial2.1e-1888.68Show/hide
Query:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
        GK GPI CLHSSDDTEEERNEVRGR A KRVESIRLDDR+KQNEIR WPKKKQ
Subjt:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ

Arabidopsis top hitse value%identityAlignment
ATMG00090.1 structural constituent of ribosome;protein binding1.5e-1988.68Show/hide
Query:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ
        GK GPI CLHSSDDTEEERNEVRGR A KRVESIRLDDR+KQNEIR WPKKKQ
Subjt:  GKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTGGGAAAGTCGGGCCAATCGGGTGTCTTCATTCAAGCGACGATACAGAAGAAGAACGAAACGAAGTGAGAGGCCGGGAGGCAGAGAAAAGAGTCGAG
TCGATCAGGCTCGACGACCGGGAAAAGCAAAACGAAATTCGGATTTGGCCGAAAAAGAAGCAACTGGGTCAGTTTGTCCACGTCACTAAGCGGGATCCCTTTAGT
TTGATTCCAACTCCACAAGTTCTTTTGCTTTGGCGTCTGGCCTCTCCGATTAGAAGGTTTACTAAAAGGCGAGGAGTAAGGTGTCTATGCCAGTACCCCCCATTC
CGGGACGACTCCTGCTTGTTCTTGTCGCTCGGCGGCCGACGACTAGAATTTCTCAATCTCGTCTCTTATCCAAACTGGGAACTAGTTTCCAGGATCCCCCCTAAG
AGGAGAAGGCACACCAAAAGCCTCGTATGCGGAGTAGCAGTAGGTCTTCTCAAAGAGAGCCTTGTCGTCGTAACTGAAATCATAATCGCTGGCGCGCATATCAAT
CTATTACTCTATTACTCGCGTCTCCGTCTGGTAGAATATGACAATTCGAATCAAAAATCTACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTTGGGAAAGTCGGGCCAATCGGGTGTCTTCATTCAAGCGACGATACAGAAGAAGAACGAAACGAAGTGAGAGGCCGGGAGGCAGAGAAAAGAGTCGAG
TCGATCAGGCTCGACGACCGGGAAAAGCAAAACGAAATTCGGATTTGGCCGAAAAAGAAGCAACTGGGTCAGTTTGTCCACGTCACTAAGCGGGATCCCTTTAGT
TTGATTCCAACTCCACAAGTTCTTTTGCTTTGGCGTCTGGCCTCTCCGATTAGAAGGTTTACTAAAAGGCGAGGAGTAAGGTGTCTATGCCAGTACCCCCCATTC
CGGGACGACTCCTGCTTGTTCTTGTCGCTCGGCGGCCGACGACTAGAATTTCTCAATCTCGTCTCTTATCCAAACTGGGAACTAGTTTCCAGGATCCCCCCTAAG
AGGAGAAGGCACACCAAAAGCCTCGTATGCGGAGTAGCAGTAGGTCTTCTCAAAGAGAGCCTTGTCGTCGTAACTGAAATCATAATCGCTGGCGCGCATATCAAT
CTATTACTCTATTACTCGCGTCTCCGTCTGGTAGAATATGACAATTCGAATCAAAAATCTACATAG
Protein sequenceShow/hide protein sequence
MEVGKVGPIGCLHSSDDTEEERNEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQLGQFVHVTKRDPFSLIPTPQVLLLWRLASPIRRFTKRRGVRCLCQYPPF
RDDSCLFLSLGGRRLEFLNLVSYPNWELVSRIPPKRRRHTKSLVCGVAVGLLKESLVVVTEIIIAGAHINLLLYYSRLRLVEYDNSNQKST