; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC11G213920 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC11G213920
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationCmU531Chr11:17367629..17368234
RNA-Seq ExpressionCmUC11G213920
SyntenyCmUC11G213920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]9.3e-5658.71Show/hide
Query:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR
        ++KKNKRLLR++  LH E E +K  I +L+ E+E++N +   FQ+AL EQA SSQ+    +E LQ+S +EYKSQL E E +N  LQ+ V S E QLL+CR
Subjt:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR

Query:  NAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCY
         AREV+TDDYAQL ++YQEMS DF +W+DEY  LRR YD+   ++E+GAEKLRQMA +ADQF+ QA TL+QG++P R   +ELSHFLGII Q LGRFGCY
Subjt:  NAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCY

Query:  H
        H
Subjt:  H

KAA0033848.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.4e-5156.04Show/hide
Query:  KKKNKRLLRDVD-VLHNEAETQKEYI------KELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEH
        ++KN + LR+++ VL  E E  +E +      KEL+ ELE ++KV  +FQSAL EQ TS+Q+I A +E LQNS KEYK ++TE + +N LLQE V S EH
Subjt:  KKKNKRLLRDVD-VLHNEAETQKEYI------KELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEH

Query:  QLLMCRNAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYL
        QLL+CRNAREVVT+D+A+LK E++E+ ADFA+WRDEY+++R  Y++V+GQ+EQG +KLR MA+ ADQF+ +   LQQ IVP++  S+ELS FLGII  YL
Subjt:  QLLMCRNAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYL

Query:  GRFGCYH
        G FGCYH
Subjt:  GRFGCYH

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]6.9e-4351Show/hide
Query:  KKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCRN
        K+K   L ++ D L+ EA        +++++ +R+ + +AN    +E     ++K    +E LQ+S +EYKSQL E E +N  LQ+ V S E QLL+CR 
Subjt:  KKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCRN

Query:  AREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCYH
        AR+V+TDDYAQL ++YQEMS DF +W+DEY  LRR YD+  G++E+GAEKLRQMA++ADQF+ QA TL+QG++P R   KELSHFLGII Q LGRF CYH
Subjt:  AREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCYH

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.2e-5658.71Show/hide
Query:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR
        M+KKNKRLLR++  LH E E +K  I +L+ E+E++N +   FQ+AL EQA SSQ+    +E LQ+  +EYKSQL E + +N  LQ+ V S E QLL+CR
Subjt:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR

Query:  NAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCY
         AREV+ DDYAQL ++YQEMS DF +W+DEY  LRR YD+  G++E+GAEKLRQMA++ADQF+ QA TL+QG++P R   KELSHFLGII Q LGRFGCY
Subjt:  NAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCY

Query:  H
        H
Subjt:  H

TYK27025.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.2e-4466.67Show/hide
Query:  VENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCRNAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMAD
        +E LQ+S KEYKSQL EVE +N  LQ+ V S E QLL+CR AREV+TDDYAQL ++YQEMS DF +W+DEY  LRR YD+  G++E+GAEKLRQMA++AD
Subjt:  VENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCRNAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMAD

Query:  QFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCYH
        QF  QA TL+QG++P R   KELSHFLGII Q LGRFGCYH
Subjt:  QFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCYH

TrEMBL top hitse value%identityAlignment
A0A5A7SM49 Glial fibrillary acidic protein-like4.5e-5658.71Show/hide
Query:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR
        ++KKNKRLLR++  LH E E +K  I +L+ E+E++N +   FQ+AL EQA SSQ+    +E LQ+S +EYKSQL E E +N  LQ+ V S E QLL+CR
Subjt:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR

Query:  NAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCY
         AREV+TDDYAQL ++YQEMS DF +W+DEY  LRR YD+   ++E+GAEKLRQMA +ADQF+ QA TL+QG++P R   +ELSHFLGII Q LGRFGCY
Subjt:  NAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCY

Query:  H
        H
Subjt:  H

A0A5A7TXA1 Glial fibrillary acidic protein-like3.3e-4351Show/hide
Query:  KKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCRN
        K+K   L ++ D L+ EA        +++++ +R+ + +AN    +E     ++K    +E LQ+S +EYKSQL E E +N  LQ+ V S E QLL+CR 
Subjt:  KKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCRN

Query:  AREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCYH
        AR+V+TDDYAQL ++YQEMS DF +W+DEY  LRR YD+  G++E+GAEKLRQMA++ADQF+ QA TL+QG++P R   KELSHFLGII Q LGRF CYH
Subjt:  AREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCYH

A0A5A7VDD9 Glial fibrillary acidic protein-like1.5e-5658.71Show/hide
Query:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR
        M+KKNKRLLR++  LH E E +K  I +L+ E+E++N +   FQ+AL EQA SSQ+    +E LQ+  +EYKSQL E + +N  LQ+ V S E QLL+CR
Subjt:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR

Query:  NAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCY
         AREV+ DDYAQL ++YQEMS DF +W+DEY  LRR YD+  G++E+GAEKLRQMA++ADQF+ QA TL+QG++P R   KELSHFLGII Q LGRFGCY
Subjt:  NAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCY

Query:  H
        H
Subjt:  H

A0A5D3BQ93 Glial fibrillary acidic protein-like6.7e-5256.04Show/hide
Query:  KKKNKRLLRDVD-VLHNEAETQKEYI------KELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEH
        ++KN + LR+++ VL  E E  +E +      KEL+ ELE ++KV  +FQSAL EQ TS+Q+I A +E LQNS KEYK ++TE + +N LLQE V S EH
Subjt:  KKKNKRLLRDVD-VLHNEAETQKEYI------KELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEH

Query:  QLLMCRNAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYL
        QLL+CRNAREVVT+D+A+LK E++E+ ADFA+WRDEY+++R  Y++V+GQ+EQG +KLR MA+ ADQF+ +   LQQ IVP++  S+ELS FLGII  YL
Subjt:  QLLMCRNAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYL

Query:  GRFGCYH
        G FGCYH
Subjt:  GRFGCYH

A0A5D3DUN1 Glial fibrillary acidic protein-like1.0e-4466.67Show/hide
Query:  VENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCRNAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMAD
        +E LQ+S KEYKSQL EVE +N  LQ+ V S E QLL+CR AREV+TDDYAQL ++YQEMS DF +W+DEY  LRR YD+  G++E+GAEKLRQMA++AD
Subjt:  VENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCRNAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMAD

Query:  QFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCYH
        QF  QA TL+QG++P R   KELSHFLGII Q LGRFGCYH
Subjt:  QFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAGAAGAATAAGAGATTGCTAAGAGATGTTGATGTTCTGCACAATGAGGCGGAAACACAAAAGGAGTACATCAAAGAGTTACAACAAGAGTTGGAGAGAATGAA
CAAAGTCGTTGCAAATTTTCAAAGCGCCTTAGAAGAGCAGGCCACATCATCCCAAAAGATTGTTGCAAAGGTTGAGAATCTACAGAATTCAGCCAAAGAATATAAATCCC
AGCTTACTGAGGTAGAACATAGAAACATACTTCTCCAGGAAGTTGTTACAAGTTTTGAACACCAATTGTTGATGTGTCGCAATGCACGAGAGGTGGTGACAGACGACTAT
GCTCAGCTGAAGAAGGAATATCAGGAAATGTCAGCAGATTTTGCGGTATGGAGAGATGAGTATAGTATGTTGAGACGCGATTACGATAATGTCAGAGGGCAGGTAGAACA
AGGAGCCGAGAAATTAAGGCAGATGGCAAAGATGGCAGATCAATTCGCAGCACAGGCTACAACCCTCCAACAAGGCATCGTACCCATGCGGCCTGACAGCAAAGAGTTGT
CTCATTTTCTAGGGATCATAAGGCAATACCTTGGGCGTTTTGGGTGCTATCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAGAAGAATAAGAGATTGCTAAGAGATGTTGATGTTCTGCACAATGAGGCGGAAACACAAAAGGAGTACATCAAAGAGTTACAACAAGAGTTGGAGAGAATGAA
CAAAGTCGTTGCAAATTTTCAAAGCGCCTTAGAAGAGCAGGCCACATCATCCCAAAAGATTGTTGCAAAGGTTGAGAATCTACAGAATTCAGCCAAAGAATATAAATCCC
AGCTTACTGAGGTAGAACATAGAAACATACTTCTCCAGGAAGTTGTTACAAGTTTTGAACACCAATTGTTGATGTGTCGCAATGCACGAGAGGTGGTGACAGACGACTAT
GCTCAGCTGAAGAAGGAATATCAGGAAATGTCAGCAGATTTTGCGGTATGGAGAGATGAGTATAGTATGTTGAGACGCGATTACGATAATGTCAGAGGGCAGGTAGAACA
AGGAGCCGAGAAATTAAGGCAGATGGCAAAGATGGCAGATCAATTCGCAGCACAGGCTACAACCCTCCAACAAGGCATCGTACCCATGCGGCCTGACAGCAAAGAGTTGT
CTCATTTTCTAGGGATCATAAGGCAATACCTTGGGCGTTTTGGGTGCTATCATTAG
Protein sequenceShow/hide protein sequence
MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAKVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCRNAREVVTDDY
AQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFAAQATTLQQGIVPMRPDSKELSHFLGIIRQYLGRFGCYH