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CmaCh00G000180 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh00G000180
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRibulose bisphosphate carboxylase large chain
Genome locationCma_Chr00:2442080..2447634
RNA-Seq ExpressionCmaCh00G000180
SyntenyCmaCh00G000180
Gene Ontology termsGO:0009853 - photorespiration (biological process)
GO:0019253 - reductive pentose-phosphate cycle (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0004497 - monooxygenase activity (molecular function)
GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domainsIPR036376 - Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEK34492.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Taraxacum sp. 2008/541]1.9e-0569.77Show/hide
Query:  CEEMMKRG-FARELGVPIVMHDYLTGGFTEILERKELLKQNML
        CEEMMKR  FARELGVPIVMHDYLTGGFT I       + N L
Subjt:  CEEMMKRG-FARELGVPIVMHDYLTGGFTEILERKELLKQNML

CBM42421.1 RuBisCO, partial [Graphorkis concolor var. alphabetica]3.0e-0682.86Show/hide
Query:  QCYCG-CEEMMKRG-FARELGVPIVMHDYLTGGFT
        +C CG CEEMMKR  FARELGVPI+MHDYLTGGFT
Subjt:  QCYCG-CEEMMKRG-FARELGVPIVMHDYLTGGFT

PHT78021.1 Ribulose bisphosphate carboxylase large chain [Capsicum annuum]5.0e-0657.38Show/hide
Query:  RAVYECLQ--------------------CYCGCEEMMKRG-FARELGVPIVMHDYLTGGFT
        RAVYECL+                      C CEEMMKR  FARELGVPIVMHDYLTGGFT
Subjt:  RAVYECLQ--------------------CYCGCEEMMKRG-FARELGVPIVMHDYLTGGFT

PVH34247.1 hypothetical protein PAHAL_8G179700 [Panicum hallii]1.9e-0581.82Show/hide
Query:  CEEMMKRG-FARELGVPIVMHDYLTGGFTEILE
        CEEM+KR  FARELGVPIVMHDY+TGGFT+IL+
Subjt:  CEEMMKRG-FARELGVPIVMHDYLTGGFTEILE

YP_010131796.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Chrysopogon zizanioides]1.0e-0682.86Show/hide
Query:  LQCYCGCEEMMKRG-FARELGVPIVMHDYLTGGFT
        L+C C CEEM+KR  FARELGVPIVMHDYLTGGFT
Subjt:  LQCYCGCEEMMKRG-FARELGVPIVMHDYLTGGFT

TrEMBL top hitse value%identityAlignment
A0A2G2Z7Z2 Ribulose bisphosphate carboxylase large chain2.4e-0657.38Show/hide
Query:  RAVYECLQ--------------------CYCGCEEMMKRG-FARELGVPIVMHDYLTGGFT
        RAVYECL+                      C CEEMMKR  FARELGVPIVMHDYLTGGFT
Subjt:  RAVYECLQ--------------------CYCGCEEMMKRG-FARELGVPIVMHDYLTGGFT

A0A2T8I998 Ribulose bisphosphate carboxylase large chain9.3e-0681.82Show/hide
Query:  CEEMMKRG-FARELGVPIVMHDYLTGGFTEILE
        CEEM+KR  FARELGVPIVMHDY+TGGFT+IL+
Subjt:  CEEMMKRG-FARELGVPIVMHDYLTGGFTEILE

A0A7T3RB33 Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit4.9e-0782.86Show/hide
Query:  LQCYCGCEEMMKRG-FARELGVPIVMHDYLTGGFT
        L+C C CEEM+KR  FARELGVPIVMHDYLTGGFT
Subjt:  LQCYCGCEEMMKRG-FARELGVPIVMHDYLTGGFT

G0WZL8 Ribulose bisphosphate carboxylase large chain (Fragment)9.3e-0669.77Show/hide
Query:  CEEMMKRG-FARELGVPIVMHDYLTGGFTEILERKELLKQNML
        CEEMMKR  FARELGVPIVMHDYLTGGFT I       + N L
Subjt:  CEEMMKRG-FARELGVPIVMHDYLTGGFTEILERKELLKQNML

L0N899 Ribulose bisphosphate carboxylase large chain (Fragment)1.4e-0682.86Show/hide
Query:  QCYCG-CEEMMKRG-FARELGVPIVMHDYLTGGFT
        +C CG CEEMMKR  FARELGVPI+MHDYLTGGFT
Subjt:  QCYCG-CEEMMKRG-FARELGVPIVMHDYLTGGFT

SwissProt top hitse value%identityAlignment
O78258 Ribulose bisphosphate carboxylase large chain (Fragment)7.3e-0893.1Show/hide
Query:  CEEMMKRG-FARELGVPIVMHDYLTGGFT
        CEEMMKR  FARELGVPIVMHDYLTGGFT
Subjt:  CEEMMKRG-FARELGVPIVMHDYLTGGFT

O78259 Ribulose bisphosphate carboxylase large chain (Fragment)7.3e-0893.1Show/hide
Query:  CEEMMKRG-FARELGVPIVMHDYLTGGFT
        CEEMMKR  FARELGVPIVMHDYLTGGFT
Subjt:  CEEMMKRG-FARELGVPIVMHDYLTGGFT

P24671 Ribulose bisphosphate carboxylase large chain7.3e-0893.1Show/hide
Query:  CEEMMKRG-FARELGVPIVMHDYLTGGFT
        CEEMMKR  FARELGVPIVMHDYLTGGFT
Subjt:  CEEMMKRG-FARELGVPIVMHDYLTGGFT

P28412 Ribulose bisphosphate carboxylase large chain (Fragment)3.3e-0869.77Show/hide
Query:  CEEMMKRG-FARELGVPIVMHDYLTGGFTEILERKELLKQNML
        CEEMMKR  FARELGVPIVMHDYLTGGFT      E  + N L
Subjt:  CEEMMKRG-FARELGVPIVMHDYLTGGFTEILERKELLKQNML

P28447 Ribulose bisphosphate carboxylase large chain (Fragment)3.3e-0869.77Show/hide
Query:  CEEMMKRG-FARELGVPIVMHDYLTGGFTEILERKELLKQNML
        CEEMMKR  FARELGVPIVMHDYLTGGFT      E  + N L
Subjt:  CEEMMKRG-FARELGVPIVMHDYLTGGFTEILERKELLKQNML

Arabidopsis top hitse value%identityAlignment
AT2G07732.1 Ribulose bisphosphate carboxylase large chain, catalytic domain1.5e-0889.66Show/hide
Query:  CEEMMKRG-FARELGVPIVMHDYLTGGFT
        CEEM+KR  FARELGVPIVMHDYLTGGFT
Subjt:  CEEMMKRG-FARELGVPIVMHDYLTGGFT

ATCG00490.1 ribulose-bisphosphate carboxylases1.5e-0889.66Show/hide
Query:  CEEMMKRG-FARELGVPIVMHDYLTGGFT
        CEEM+KR  FARELGVPIVMHDYLTGGFT
Subjt:  CEEMMKRG-FARELGVPIVMHDYLTGGFT

ATMG00280.1 Ribulose bisphosphate carboxylase large chain, catalytic domain9.2e-0681.48Show/hide
Query:  CEEMMKRG-FARELGVPIVMHDYLTGG
        CEEM+KR  FARELGVPIVMHDYL  G
Subjt:  CEEMMKRG-FARELGVPIVMHDYLTGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGAGCAGTTTATGAATGTCTACAATGCTACTGCGGATGCGAAGAAATGATGAAAAGGGGCTTTGCTCGAGAATTAGGAGTTCCTATCGTAATGCATGAC
TACTTAACTGGTGGATTCACTGAAATCCTAGAAAGAAAAGAGCTACTGAAACAGAATATGCTTTACAAAGTGAAAGAAGAAGAGACAGGAGAAAGAATCGGACGG
AAAGGGGCGAAGCAGAGGTTAATCTTAATAAAGAAGGCCAGAGGGTACAGGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGAGCAGTTTATGAATGTCTACAATGCTACTGCGGATGCGAAGAAATGATGAAAAGGGGCTTTGCTCGAGAATTAGGAGTTCCTATCGTAATGCATGAC
TACTTAACTGGTGGATTCACTGAAATCCTAGAAAGAAAAGAGCTACTGAAACAGAATATGCTTTACAAAGTGAAAGAAGAAGAGACAGGAGAAAGAATCGGACGG
AAAGGGGCGAAGCAGAGGTTAATCTTAATAAAGAAGGCCAGAGGGTACAGGGAATAA
Protein sequenceShow/hide protein sequence
MVRAVYECLQCYCGCEEMMKRGFARELGVPIVMHDYLTGGFTEILERKELLKQNMLYKVKEEETGERIGRKGAKQRLILIKKARGYRE