CuGenDBv2

Gene ID	CmaCh00G000190
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Ribulose bisphosphate carboxylase large chain
Genome location	Cma_Chr00:2447845..2448353
RNA-Seq Expression	CmaCh00G000190
Synteny	CmaCh00G000190
Gene Ontology terms	GO:0009853 - photorespiration (biological process) GO:0019253 - reductive pentose-phosphate cycle (biological process) GO:0009507 - chloroplast (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0004497 - monooxygenase activity (molecular function) GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domains	IPR017443 - Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal IPR033966 - RuBisCO IPR036422 - RuBisCO large subunit, N-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QCW24044.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Cyperus ligularis]

2.8e-39

82.88

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKANVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++  AGEENQYIAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

QCW65626.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Cyperus orthostachyus]

2.8e-39

82.88

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKANVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++  AGEENQYIAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

QCW65792.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Cyperus iria]

2.8e-39

82.88

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKANVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++  AGEENQYIAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

YP_009915514.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Cyperus rotundus]

2.8e-39

82.88

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKANVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++  AGEENQYIAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

YP_010045746.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Cyperus exaltatus]

2.8e-39

82.88

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKANVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++  AGEENQYIAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

TrEMBL top hits

e value

%identity

Alignment

A0A2L0A3G6 Ribulose bisphosphate carboxylase large chain (Fragment)

1.4e-39

82.88

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKANVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++  AGEENQYIAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

A0A7D0FSP2 Ribulose bisphosphate carboxylase large chain (Fragment)

1.4e-39

82.88

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKANVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++  AGEENQYIAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

A0A7D0FT17 Ribulose bisphosphate carboxylase large chain (Fragment)

1.4e-39

82.88

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKANVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++  AGEENQYIAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

A0A7D0JTA9 Ribulose bisphosphate carboxylase large chain (Fragment)

1.4e-39

82.88

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKANVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++  AGEENQYIAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

A0A7G5XUQ8 Ribulose bisphosphate carboxylase large chain

1.4e-39

82.88

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKANVGFKAGVKD KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++  AGEENQYIAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

SwissProt top hits

e value

%identity

Alignment

O62943 Ribulose bisphosphate carboxylase large chain

1.1e-41

81.98

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKA+VGFKAGVKD KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++  AGEENQYIAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

P27064 Ribulose bisphosphate carboxylase large chain

1.1e-41

81.98

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKA+VGFKAGVKD KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++  AGEENQYIAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

P27066 Ribulose bisphosphate carboxylase large chain

8.2e-42

81.98

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKA+VGFKAGVKD KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++  AGEENQYIAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

P31202 Ribulose bisphosphate carboxylase large chain (Fragment)

8.2e-42

81.98

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKA+VGFKAGVKD KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++  AGEENQYIAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

Q3BAN4 Ribulose bisphosphate carboxylase large chain

1.1e-41

81.98

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKA+VGFKAGVKD KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++V  GEENQYIAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

Arabidopsis top hits

e value

%identity

Alignment

ATCG00490.1 ribulose-bisphosphate carboxylases

2.1e-40

78.38

Show/hide

Query:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP
        TKA+VGFKAGVK+ KLTYYTP YETKDTDILAA RVTPQPGVPPEEAGAAV AAESSTGTWTTVW DGLTSLDRY  +   ++   GEE Q+IAY+ AYP
Subjt:  TKANVGFKAGVKDSKLTYYTP-YETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAYLAAYP

Query:  LDPFEKGSVTN
        LD FE+GSVTN
Subjt:  LDPFEKGSVTN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTTCCTTCTGGAGTTTAGTCTCTTTCCTACTAAAGCAAATGTTGGATTCAAAGCTGGTGTTAAAGATTCTAAATTGACTTATTATACTCCATATGAAACC
AAAGATACTGATATCTTGGCAGCATTACGAGTTACTCCTCAACCAGGAGTTCCACCCGAGGAAGCAGGGGCCGCTGTAGCTGCTGCTGAATCTTCTACTGGTACA
TGGACAACTGTGTGGATCGATGGGCTTACCAGTCTTGATCGTTACGTTACAAAGGACGATGCTATGGATGTTCCCGCTGGAGAAGAAAATCAATATATTGCTTAT
CTAGCTGCTTATCCCCTAGACCCTTTTGAAAAAGGTTCTGTTACTAACTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSFLLEFSLFPTKANVGFKAGVKDSKLTYYTPYETKDTDILAALRVTPQPGVPPEEAGAAVAAAESSTGTWTTVWIDGLTSLDRYVTKDDAMDVPAGEENQYIAY
LAAYPLDPFEKGSVTN

CmaCh00G000190 (gene) of Cucurbita maxima (Rimu) v1.1 genome