; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh00G001040 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh00G001040
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionpolygalacturonase-like
Genome locationCma_Chr00:4731612..4732544
RNA-Seq ExpressionCmaCh00G001040
SyntenyCmaCh00G001040
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0015698 - inorganic anion transport (biological process)
GO:0098656 - anion transmembrane transport (biological process)
GO:0005741 - mitochondrial outer membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004650 - polygalacturonase activity (molecular function)
GO:0008308 - voltage-gated anion channel activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022933258.1 polygalacturonase-like [Cucurbita moschata]6.6e-13193.65Show/hide
Query:  MNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILID
        MN CIIKFS+SLLVILH+FLSL L++FNHASAAELTFNI+TLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSV FNGPCKNNAIT+LID
Subjt:  MNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILID

Query:  GTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAG
        GTLVASSDI VLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHS KSCPIGARSLQIND KNVNINGLSSINSQLF I MNRCQNVHMTRVNVLAAG
Subjt:  GTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAG

Query:  DSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
        DSPNTDGIHV+QSSDVTILNSNIGNGDDCISIGPGTSNMWIE+ITCGPGHGI
Subjt:  DSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI

XP_022963687.1 polygalacturonase-like [Cucurbita moschata]1.7e-13194.05Show/hide
Query:  MNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILID
        MN CIIKFS+SLLVILHVFLSL L FFNHASAAELTFNI+TLGAKPDEKTDASP+LQTAWAK CDSSEPATIYVPEGIFFVRSV FNGPCKNNAIT+LID
Subjt:  MNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILID

Query:  GTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAG
        GTLVASSDIQVLANSSSWI FNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQIND KNVNINGLSSINSQLF IVMNRCQNVHM+RVNVLAAG
Subjt:  GTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAG

Query:  DSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
        DSPNTDGIHV+QSSDVTILNSNIGNGDDCISIGPGTSNMWIE+ITCGPGHGI
Subjt:  DSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI

XP_022973232.1 polygalacturonase-like [Cucurbita maxima]3.6e-11381.57Show/hide
Query:  MHIMNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITI
        M I N CIIKFS +LLV  HVFLSLQL FFNHA AAELTFNI++LGAKPD KTDAS VLQ  WAKACDSS PATIYVP+GIF+VRSV FNGPCKNN IT+
Subjt:  MHIMNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITI

Query:  LIDGTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVL
        LIDGTLVASSDIQVLA + SWI F+HI+GLSITGG IDGQGT LWNCKHS KSCP+GA SLQIND +NVNINGLSSINSQ F+IV++ CQNVHMTRVNV 
Subjt:  LIDGTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVL

Query:  AAGDSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
        AA DSPNTDGIHV+QSSDVTILNS+I NGDDCISI PGTSN+W+ESITCGPGHGI
Subjt:  AAGDSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI

XP_022973582.1 polygalacturonase-like [Cucurbita maxima]3.6e-11381.57Show/hide
Query:  MHIMNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITI
        M I N CIIKFS +LLV  HVFLSLQL FFNHA AAELTFNI++LGAKPD KTDAS VLQ  WAKACDSS PATIYVP+GIF+VRSV FNGPCKNN IT+
Subjt:  MHIMNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITI

Query:  LIDGTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVL
        LIDGTLVASSDIQVLA + SWI F+HI+GLSITGG IDGQGT LWNCKHS KSCP+GA SLQIND +NVNINGLSSINSQ F+IV++ CQNVHMTRVNV 
Subjt:  LIDGTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVL

Query:  AAGDSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
        AA DSPNTDGIHV+QSSDVTILNS+I NGDDCISI PGTSN+W+ESITCGPGHGI
Subjt:  AAGDSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI

XP_022974795.1 polygalacturonase-like [Cucurbita maxima]5.2e-13698.41Show/hide
Query:  MNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILID
        MNTCIIKFS+SLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDAS VLQTAWAKACDSSEPATIYVPEGIFFVRSV FNGPCKNNAITILID
Subjt:  MNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILID

Query:  GTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAG
        GTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQIND KNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAG
Subjt:  GTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAG

Query:  DSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
        DSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
Subjt:  DSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI

TrEMBL top hitse value%identityAlignment
A0A6J1F489 polygalacturonase-like3.2e-13193.65Show/hide
Query:  MNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILID
        MN CIIKFS+SLLVILH+FLSL L++FNHASAAELTFNI+TLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSV FNGPCKNNAIT+LID
Subjt:  MNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILID

Query:  GTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAG
        GTLVASSDI VLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHS KSCPIGARSLQIND KNVNINGLSSINSQLF I MNRCQNVHMTRVNVLAAG
Subjt:  GTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAG

Query:  DSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
        DSPNTDGIHV+QSSDVTILNSNIGNGDDCISIGPGTSNMWIE+ITCGPGHGI
Subjt:  DSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI

A0A6J1HFX3 polygalacturonase-like8.4e-13294.05Show/hide
Query:  MNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILID
        MN CIIKFS+SLLVILHVFLSL L FFNHASAAELTFNI+TLGAKPDEKTDASP+LQTAWAK CDSSEPATIYVPEGIFFVRSV FNGPCKNNAIT+LID
Subjt:  MNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILID

Query:  GTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAG
        GTLVASSDIQVLANSSSWI FNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQIND KNVNINGLSSINSQLF IVMNRCQNVHM+RVNVLAAG
Subjt:  GTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAG

Query:  DSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
        DSPNTDGIHV+QSSDVTILNSNIGNGDDCISIGPGTSNMWIE+ITCGPGHGI
Subjt:  DSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI

A0A6J1I6Z6 polygalacturonase-like1.8e-11381.57Show/hide
Query:  MHIMNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITI
        M I N CIIKFS +LLV  HVFLSLQL FFNHA AAELTFNI++LGAKPD KTDAS VLQ  WAKACDSS PATIYVP+GIF+VRSV FNGPCKNN IT+
Subjt:  MHIMNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITI

Query:  LIDGTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVL
        LIDGTLVASSDIQVLA + SWI F+HI+GLSITGG IDGQGT LWNCKHS KSCP+GA SLQIND +NVNINGLSSINSQ F+IV++ CQNVHMTRVNV 
Subjt:  LIDGTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVL

Query:  AAGDSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
        AA DSPNTDGIHV+QSSDVTILNS+I NGDDCISI PGTSN+W+ESITCGPGHGI
Subjt:  AAGDSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI

A0A6J1I7X1 polygalacturonase-like1.8e-11381.57Show/hide
Query:  MHIMNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITI
        M I N CIIKFS +LLV  HVFLSLQL FFNHA AAELTFNI++LGAKPD KTDAS VLQ  WAKACDSS PATIYVP+GIF+VRSV FNGPCKNN IT+
Subjt:  MHIMNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITI

Query:  LIDGTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVL
        LIDGTLVASSDIQVLA + SWI F+HI+GLSITGG IDGQGT LWNCKHS KSCP+GA SLQIND +NVNINGLSSINSQ F+IV++ CQNVHMTRVNV 
Subjt:  LIDGTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVL

Query:  AAGDSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
        AA DSPNTDGIHV+QSSDVTILNS+I NGDDCISI PGTSN+W+ESITCGPGHGI
Subjt:  AAGDSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI

A0A6J1IEV2 polygalacturonase-like2.5e-13698.41Show/hide
Query:  MNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILID
        MNTCIIKFS+SLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDAS VLQTAWAKACDSSEPATIYVPEGIFFVRSV FNGPCKNNAITILID
Subjt:  MNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILID

Query:  GTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAG
        GTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQIND KNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAG
Subjt:  GTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAG

Query:  DSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
        DSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
Subjt:  DSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI

SwissProt top hitse value%identityAlignment
O22818 Probable polygalacturonase At2g438602.1e-5544.71Show/hide
Query:  IMNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNG-PCKNNAITIL
        + NT  +   ++L+++    +S      + A     T N+++ GAKPD   D++     AW  AC S+ P TI VP+G F V +++F+G  CK   I+I 
Subjt:  IMNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNG-PCKNNAITIL

Query:  IDGTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHS-RKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVL
        I G++VA  D +++A+S  WI F  +  +SI GGI+D QGT LW CK++   +CP GA+SL  +   N+ I+GL+SINSQ F IV++   NV++  V V 
Subjt:  IDGTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHS-RKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVL

Query:  AAGDSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
        A  +SPNTDGIHV  S  V I NS IG GDDCISIGPG++N++I++I CGPGHGI
Subjt:  AAGDSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI

P26216 Exopolygalacturonase1.8e-4644.25Show/hide
Query:  ASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILIDGTLVASSDIQVLANSSSWILFNHINGLSI
        AS    +F+I  LGA  + KTD++  +Q AWA AC  +   TI +P+G F V  + F GPCK + +TI +DG L+A++D+    +  +WI    ++ L I
Subjt:  ASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILIDGTLVASSDIQVLANSSSWILFNHINGLSI

Query:  TG-GIIDGQGTPLW--NCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTDGIHVRQSSDVTILNSNIGNG
        TG G +DGQG  +W  N    +  C I   SL ++   N  ++G++ +NS+ F + M RC+++ +  V V A GDSPNTDGIH+  SS +TI N+ IG G
Subjt:  TG-GIIDGQGTPLW--NCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTDGIHVRQSSDVTILNSNIGNG

Query:  DDCISIGPGTSNMWIESITCGPGHGI
        DDCISIGPGTS + I  +TCGPGHGI
Subjt:  DDCISIGPGTSNMWIESITCGPGHGI

P35338 Exopolygalacturonase1.8e-4644.25Show/hide
Query:  ASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILIDGTLVASSDIQVLANSSSWILFNHINGLSI
        AS    +F+I  LGA  + KTD++  +Q AWA AC  +   TI +P+G F V  + F GPCK + +TI +DG L+A++D+       +WI    ++ L I
Subjt:  ASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILIDGTLVASSDIQVLANSSSWILFNHINGLSI

Query:  TG-GIIDGQGTPLW--NCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTDGIHVRQSSDVTILNSNIGNG
        TG G +DGQG  +W  N    +  C I   SL ++   N  ++G++ +NS+ F + M +C+N+ +  V V A GDSPNTDGIH+  SS +TI N+ IG G
Subjt:  TG-GIIDGQGTPLW--NCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTDGIHVRQSSDVTILNSNIGNG

Query:  DDCISIGPGTSNMWIESITCGPGHGI
        DDCISIGPGTS + I  +TCGPGHGI
Subjt:  DDCISIGPGTSNMWIESITCGPGHGI

P35339 Exopolygalacturonase3.0e-4644.25Show/hide
Query:  ASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILIDGTLVASSDIQVLANSSSWILFNHINGLSI
        AS    +F+I  LGA  + KTD++  +Q AWA AC  +   TI +P+G F V  + F GPCK + +TI ++G L+A++D+    +  +WI    ++ L I
Subjt:  ASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILIDGTLVASSDIQVLANSSSWILFNHINGLSI

Query:  TG-GIIDGQGTPLW--NCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTDGIHVRQSSDVTILNSNIGNG
        TG G +DGQG  +W  N    +  C I   SL ++   N  ++G++ +NS+ F + M +C+++ +  VNV A GDSPNTDGIH+  SS VTI N+ IG G
Subjt:  TG-GIIDGQGTPLW--NCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTDGIHVRQSSDVTILNSNIGNG

Query:  DDCISIGPGTSNMWIESITCGPGHGI
        DDCISIGPGTS + I  +TCGPGHGI
Subjt:  DDCISIGPGTSNMWIESITCGPGHGI

P48979 Polygalacturonase2.5e-7756.91Show/hide
Query:  FSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILIDGTLVASS
        FS+SL+ +         F  N A A+ LT+N+ +LGAK D KTD++    +AWAKAC S  P  IYVP G FF+R V+F+GPCKNNAIT  I GTLVA S
Subjt:  FSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILIDGTLVASS

Query:  DIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSR-KSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTD
        D +V+ N+++WI F+H+NG++I+GGI+DGQGT LW CK    +SCP GA +L  +D  N+ ++GL+S+NSQ+F IV+N  QNV M  V V  +G+SPNTD
Subjt:  DIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSR-KSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTD

Query:  GIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
        GIHV+ SS VTILNS I  GDDC+SIGPGTSN+WIE + CGPGHGI
Subjt:  GIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI

Arabidopsis top hitse value%identityAlignment
AT1G05650.1 Pectin lyase-like superfamily protein1.0e-5744.54Show/hide
Query:  LFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILIDGTLVASSDIQVLANSSSWILFNH
        L F + +S+A + FN+V+ GAKPD  TD++     AW  AC S+  AT+ VP G F ++ + F GPCK+  IT  + GT+VA  D +   NS SWILFN 
Subjt:  LFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILIDGTLVASSDIQVLANSSSWILFNH

Query:  INGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTDGIHVRQSSDVTILNSNI
        +N  S+ GG  D +G+  W+C+ S ++CP G RS+  N  K+V I+G+ S+NSQ+  + +N C NV +  + ++A GDSPNTDG  V+ S+ VT+  S +
Subjt:  INGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTDGIHVRQSSDVTILNSNI

Query:  GNGDDCISIGPGTSNMWIESITCGPGHGI
          GDDC++IG GT N  I  + CGPGHG+
Subjt:  GNGDDCISIGPGTSNMWIESITCGPGHGI

AT2G43860.1 Pectin lyase-like superfamily protein1.5e-5644.71Show/hide
Query:  IMNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNG-PCKNNAITIL
        + NT  +   ++L+++    +S      + A     T N+++ GAKPD   D++     AW  AC S+ P TI VP+G F V +++F+G  CK   I+I 
Subjt:  IMNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNG-PCKNNAITIL

Query:  IDGTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHS-RKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVL
        I G++VA  D +++A+S  WI F  +  +SI GGI+D QGT LW CK++   +CP GA+SL  +   N+ I+GL+SINSQ F IV++   NV++  V V 
Subjt:  IDGTLVASSDIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHS-RKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVL

Query:  AAGDSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
        A  +SPNTDGIHV  S  V I NS IG GDDCISIGPG++N++I++I CGPGHGI
Subjt:  AAGDSPNTDGIHVRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI

AT2G43870.1 Pectin lyase-like superfamily protein2.6e-6951.28Show/hide
Query:  LSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNG-PCKNNAITILIDGTLVASSDIQVLANSSSW
        L L +FFF  + +A+ ++N+++ GAKPD KTDA+      W  AC SS P TI VP+G F +RSV F+G  CK   +T  IDGTLVA +D +V+ N   W
Subjt:  LSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNG-PCKNNAITILIDGTLVASSDIQVLANSSSW

Query:  ILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTDGIHVRQSSDVTI
        I F H++G+++ GG++D +G  LW+CK S K+CP GA ++      NV ++GL+S+NSQ+F +V+N C NV +  V VLAAG+SPNTDGIHV+ SS V+I
Subjt:  ILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTDGIHVRQSSDVTI

Query:  LNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
         N+ I  GDDC+SIGPGT+ +WIE++ CGPGHGI
Subjt:  LNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI

AT2G43890.1 Pectin lyase-like superfamily protein6.1e-5846.06Show/hide
Query:  LLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILIDGTLVASSDIQV
        L+ +L +F S   F    +S A   +N+V+ GAKPD +TD++     AW  AC S+   T+ VP G F ++ V F GPC++  IT  I GT+VA SD + 
Subjt:  LLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILIDGTLVASSDIQV

Query:  LANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTDGIHVR
        L NS  WILF  +N +SI GG +D +G   W C+ S KSCP+GARS+  N   +V ++GL+SINSQ   +V+N C NV + +V ++A   SPNTDG+HV+
Subjt:  LANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTDGIHVR

Query:  QSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
         S+ VT+ +     GDDCISIGPGT N+++  + CGPGHGI
Subjt:  QSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI

AT3G59850.1 Pectin lyase-like superfamily protein1.4e-7051.85Show/hide
Query:  SLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNG-PCKNNAITILIDGTLVASSDI
        SLL++L       LF  + +S++  T+NI++ GAKPD KTD++      WAKAC S +P TI VP+G F +RS+IF+G  CK  ++T  I GTLVA SD 
Subjt:  SLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNG-PCKNNAITILIDGTLVASSDI

Query:  QVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTDGIH
        +V+   + WILF H++G+S+ GG++D QG  LW+CK S K+CP GA S+     +NV I+GL+S+NSQ+F + +N C NV +  V V A G+SPNTDGIH
Subjt:  QVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTDGIH

Query:  VRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI
        V+ SS V+ILNS I  GDDC+SIGPGT+ +WIE++ CGPGHGI
Subjt:  VRQSSDVTILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATATCATGAACACTTGTATCATTAAGTTTTCTGTGTCTCTTCTTGTAATCTTACATGTTTTTCTTTCCCTTCAACTTTTTTTTTTTAACCATGCCTCAGCTGCTGA
ATTAACATTCAATATTGTTACTCTCGGAGCTAAGCCTGATGAAAAGACCGATGCCTCGCCTGTGCTTCAAACGGCATGGGCTAAGGCCTGTGACTCATCTGAACCAGCCA
CTATTTACGTTCCGGAGGGTATATTCTTCGTTCGAAGTGTGATATTTAATGGGCCTTGTAAGAACAATGCTATTACTATTCTCATTGATGGAACTCTTGTGGCTTCCTCG
GACATTCAAGTTTTAGCTAATTCTAGTTCTTGGATTTTGTTTAATCACATAAATGGGCTTTCCATCACTGGCGGTATTATTGATGGACAAGGAACTCCCCTATGGAATTG
TAAACACTCAAGGAAGAGTTGCCCCATTGGAGCCCGGAGTCTTCAAATAAATGATGAAAAGAATGTGAACATCAATGGATTATCTTCAATTAACAGCCAATTGTTCAGCA
TTGTAATGAATCGGTGCCAAAACGTGCATATGACAAGAGTGAATGTCTTGGCTGCAGGCGATAGTCCAAACACTGATGGCATCCATGTGCGACAATCATCAGATGTGACC
ATCCTCAACTCAAACATTGGAAACGGTGACGACTGCATCTCCATCGGTCCAGGGACATCCAACATGTGGATTGAAAGTATTACATGTGGACCTGGACATGGAATCAGGTA
A
mRNA sequenceShow/hide mRNA sequence
ATGCATATCATGAACACTTGTATCATTAAGTTTTCTGTGTCTCTTCTTGTAATCTTACATGTTTTTCTTTCCCTTCAACTTTTTTTTTTTAACCATGCCTCAGCTGCTGA
ATTAACATTCAATATTGTTACTCTCGGAGCTAAGCCTGATGAAAAGACCGATGCCTCGCCTGTGCTTCAAACGGCATGGGCTAAGGCCTGTGACTCATCTGAACCAGCCA
CTATTTACGTTCCGGAGGGTATATTCTTCGTTCGAAGTGTGATATTTAATGGGCCTTGTAAGAACAATGCTATTACTATTCTCATTGATGGAACTCTTGTGGCTTCCTCG
GACATTCAAGTTTTAGCTAATTCTAGTTCTTGGATTTTGTTTAATCACATAAATGGGCTTTCCATCACTGGCGGTATTATTGATGGACAAGGAACTCCCCTATGGAATTG
TAAACACTCAAGGAAGAGTTGCCCCATTGGAGCCCGGAGTCTTCAAATAAATGATGAAAAGAATGTGAACATCAATGGATTATCTTCAATTAACAGCCAATTGTTCAGCA
TTGTAATGAATCGGTGCCAAAACGTGCATATGACAAGAGTGAATGTCTTGGCTGCAGGCGATAGTCCAAACACTGATGGCATCCATGTGCGACAATCATCAGATGTGACC
ATCCTCAACTCAAACATTGGAAACGGTGACGACTGCATCTCCATCGGTCCAGGGACATCCAACATGTGGATTGAAAGTATTACATGTGGACCTGGACATGGAATCAGGTA
A
Protein sequenceShow/hide protein sequence
MHIMNTCIIKFSVSLLVILHVFLSLQLFFFNHASAAELTFNIVTLGAKPDEKTDASPVLQTAWAKACDSSEPATIYVPEGIFFVRSVIFNGPCKNNAITILIDGTLVASS
DIQVLANSSSWILFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDEKNVNINGLSSINSQLFSIVMNRCQNVHMTRVNVLAAGDSPNTDGIHVRQSSDVT
ILNSNIGNGDDCISIGPGTSNMWIESITCGPGHGIR