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CmaCh00G001090 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh00G001090
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionCytochrome f
Genome locationCma_Chr00:4864819..4865110
RNA-Seq ExpressionCmaCh00G001090
SyntenyCmaCh00G001090
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0031361 - integral component of thylakoid membrane (cellular component)
GO:0005506 - iron ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR002325 - Cytochrome f
IPR036826 - Cytochrome f large domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1219091.1 Apocytochrome f [Morella rubra]5.2e-1050Show/hide
Query:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKR
        ++  GRIVCANCHLANKPV                     +  Q   +L+   +  LNV AVLILP GFELAPPIVF PRLKKR
Subjt:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKR
PHT54987.1 Cytochrome f [Capsicum baccatum]3.4e-0955.71Show/hide
Query:  KQPIGRIVCANCHLANKPVSRFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAILS
        ++  GRIVCANCHLANKPV     Q   +L+   + GLNV AVLILP+GFELAPP    P +K+R   LS
Subjt:  KQPIGRIVCANCHLANKPVSRFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAILS
QHN97880.1 Cytochrome f [Arachis hypogaea]2.8e-1149.43Show/hide
Query:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAI
        ++  GRIVCANCHLANKPV                     +  Q   +L+   +  LNV AVLILP+GFELAPPIVF PRLKK W I
Subjt:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAI
QHO46263.1 Cytochrome f [Arachis hypogaea]2.8e-1149.43Show/hide
Query:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAI
        ++  GRIVCANCHLANKPV                     +  Q   +L+   +  LNV AVLILP+GFELAPPIVF PRLKK W I
Subjt:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAI
VVW85412.1 unnamed protein product, partial [Nymphaea colorata]2.0e-0950Show/hide
Query:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPR
        ++  GRIVCANCHLANKPV                     +  Q   +L+   + GLNV AVLILP+GFELAPPIVFLPR
Subjt:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPR
TrEMBL top hitse value%identityAlignment
A0A2G2XBY1 Cytochrome f1.6e-0955.71Show/hide
Query:  KQPIGRIVCANCHLANKPVSRFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAILS
        ++  GRIVCANCHLANKPV     Q   +L+   + GLNV AVLILP+GFELAPP    P +K+R   LS
Subjt:  KQPIGRIVCANCHLANKPVSRFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAILS
A0A5K1HCI3 Apocytochr_F_N domain-containing protein (Fragment)9.6e-1050Show/hide
Query:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPR
        ++  GRIVCANCHLANKPV                     +  Q   +L+   + GLNV AVLILP+GFELAPPIVFLPR
Subjt:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPR
A0A6A1W1L6 Apocytochrome f2.5e-1050Show/hide
Query:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKR
        ++  GRIVCANCHLANKPV                     +  Q   +L+   +  LNV AVLILP GFELAPPIVF PRLKKR
Subjt:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKR
A0A6B9QEM0 Cytochrome f1.1e-0844.94Show/hide
Query:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAILS
        ++  GRIVCANCHLANKPV                     + KQ   +L+   + GLNV AVLILP+GFELAPP    P +K+R   LS
Subjt:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAILS
A0A6F8FBK4 Cytochrome f4.8e-0944.94Show/hide
Query:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAILS
        ++  GRIVCANCHLANKPV                    R+ KQ   +L+     GLNV AVLILP+GFELAPP    P +K++   LS
Subjt:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAILS
SwissProt top hitse value%identityAlignment
A0A348 Cytochrome f6.4e-1143.82Show/hide
Query:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAILS
        ++  GRIVCANCHLANKPV                     + KQ   +L+   + GLNV AVLILP+GFELAPP    P +K++   LS
Subjt:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAILS
B0Z4N9 Cytochrome f8.4e-1144.05Show/hide
Query:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKR
        ++  GRIVCANCHLANKPV                     + +Q   +L+   + GLNV AVLILP+GFELAPP    P +K+R
Subjt:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKR
B0Z4X3 Cytochrome f8.4e-1144.05Show/hide
Query:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKR
        ++  GRIVCANCHLANKPV                     + +Q   +L+   + GLNV AVLILP+GFELAPP    P +K+R
Subjt:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKR
B0Z557 Cytochrome f8.4e-1144.05Show/hide
Query:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKR
        ++  GRIVCANCHLANKPV                     + +Q   +L+   + GLNV AVLILP+GFELAPP    P +K+R
Subjt:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKR
P04658 Cytochrome f8.4e-1144.05Show/hide
Query:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKR
        ++  GRIVCANCHLANKPV                     + +Q   +L+   + GLNV AVLILP+GFELAPP    P +K+R
Subjt:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKR
Arabidopsis top hitse value%identityAlignment
ATCG00540.1 photosynthetic electron transfer A1.1e-1041.57Show/hide
Query:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAILS
        ++  GRIVCANCHLANKPV                     +  Q   +L+   +  LNV AVLILP+GFELAPP    P +K++   LS
Subjt:  KQPIGRIVCANCHLANKPVS-------------------RFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAILS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATCCACGAGAAGCAACCAATCGGCCGTATTGTCTGCGCAAACTGCCATTTAGCTAATAAGCCCGTGTCGAGGTTCCACAAGCAATACTTCCTGATACTTTCTTG
CGAATGGGAAAAGGGTTTGAATGTGTCGGCTGTTCTTATTTTACCCAAAGGGTTTGAATTAGCCCCCCCGATCGTATTTCTCCCAAGATTAAAGAAAAGATGGGCAATCC
TTTCAGAGTTATCGTCCCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATCCACGAGAAGCAACCAATCGGCCGTATTGTCTGCGCAAACTGCCATTTAGCTAATAAGCCCGTGTCGAGGTTCCACAAGCAATACTTCCTGATACTTTCTTG
CGAATGGGAAAAGGGTTTGAATGTGTCGGCTGTTCTTATTTTACCCAAAGGGTTTGAATTAGCCCCCCCGATCGTATTTCTCCCAAGATTAAAGAAAAGATGGGCAATCC
TTTCAGAGTTATCGTCCCACTAA
Protein sequenceShow/hide protein sequence
MKIHEKQPIGRIVCANCHLANKPVSRFHKQYFLILSCEWEKGLNVSAVLILPKGFELAPPIVFLPRLKKRWAILSELSSH