CuGenDBv2

Gene ID	CmaCh00G003100
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	ATP synthase epsilon chain, chloroplastic
Genome location	Cma_Chr00:23280104..23283656
RNA-Seq Expression	CmaCh00G003100
Synteny	CmaCh00G003100
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR001469 - ATP synthase, F1 complex, delta/epsilon subunit IPR020547 - ATP synthase delta/epsilon subunit, C-terminal domain

Homology

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GenBank top hits

e value

%identity

Alignment

ALO21750.1 AtpE [Cucurbita argyrosperma]

2.6e-32

93.9

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Query:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT
        DN GWLT+ALMGGFARIGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVP+
Subjt:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT

ASY96329.1 ATP synthase CF1 epsilon subunit [Cucumis melo subsp. agrestis]

5.7e-32

93.83

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Query:  NEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT
        N+GWLT+ALMGGFARIGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVP+
Subjt:  NEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT

YP_009447456.1 ATP synthase CF1 epsilon subunit [Cucurbita maxima]

1.2e-32

93.9

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Query:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT
        DN+GWLT+ALMGGFARIGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVP+
Subjt:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT

YP_009447541.1 ATP synthase CF1 epsilon subunit [Cucurbita moschata]

2.6e-32

93.9

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Query:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT
        DN GWLT+ALMGGFARIGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVP+
Subjt:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT

YP_009752081.1 CF1 subunit epsilon [Dendrosicyos socotranus]

5.7e-32

93.83

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Query:  NEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT
        N+GWLT+ALMGGFARIGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVP+
Subjt:  NEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT

TrEMBL top hits

e value

%identity

Alignment

A0A0S2IDX1 AtpE

1.2e-32

93.9

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Query:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT
        DN GWLT+ALMGGFARIGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVP+
Subjt:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT

A0A0S2IEZ8 AtpE

5.6e-33

93.9

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Query:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT
        DN+GWLT+ALMGGFARIGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVP+
Subjt:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT

A0A0S2IFD1 ATP synthase CF1 epsilon subunit

1.2e-32

93.9

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Query:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT
        DN GWLT+ALMGGFARIGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVP+
Subjt:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT

A0A0S2IFH2 AtpE

5.6e-33

93.9

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Query:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT
        DN+GWLT+ALMGGFARIGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVP+
Subjt:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT

A0A2H4T1X1 ATP synthase epsilon chain, chloroplastic

5.6e-33

93.9

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Query:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT
        DN+GWLT+ALMGGFARIGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVP+
Subjt:  DNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT

SwissProt top hits

e value

%identity

Alignment

A0ZZ41 ATP synthase epsilon chain, chloroplastic

1.1e-30

86.08

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Query:  NEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV
        N+ WLT+ALMGGFARIGNNE+ ILVND EK SDIDPQEAQQ LEIAEANLRKA+GKRQTIEANLALRRARTRVEAIN +
Subjt:  NEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV

Q1KXV3 ATP synthase epsilon chain, chloroplastic

2.5e-30

84.81

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Query:  NEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV
        N+ WLT+ALMGGFARIGNNE+ +LVND EK+SDIDPQEAQQTLEIAEA LRKA+GKRQTIEANLALRRARTRVEAIN +
Subjt:  NEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV

Q2L911 ATP synthase epsilon chain, chloroplastic

1.1e-30

86.08

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Query:  NEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV
        N+ WLT+ALMGGFARIGNNE+ ILVND EK SDIDPQEAQQ LEIAEANLRKA+GKRQTIEANLALRRARTRVEAIN +
Subjt:  NEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV

Q49KZ2 ATP synthase epsilon chain, chloroplastic

1.1e-30

84.81

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Query:  NEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV
        N+ WLT+ALMGGFARIGNNE+ ILVND EK SDIDPQEAQ+TLE+AEANLRKA+GKRQTIEANLALRRARTRVEAIN +
Subjt:  NEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV

Q4VZG9 ATP synthase epsilon chain, chloroplastic

7.5e-35

93.83

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Query:  NEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT
        N+GWLT+ALMGGFARIGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVP+
Subjt:  NEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPT

Arabidopsis top hits

e value

%identity

Alignment

ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein

1.5e-06

66.67

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Query:  INGVPTPLSKEPEKLFSYESGIEPMGDAWNHIR
        I+GV +P+ K PEKL SYESGIEP+GDAW   R
Subjt:  INGVPTPLSKEPEKLFSYESGIEPMGDAWNHIR

ATCG00470.1 ATP synthase epsilon chain

5.2e-31

88.16

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Query:  WLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV
        WLT+ALMGGFARIGNNE+ ILVND EK SDIDPQEAQQTLEIAEANLRKA+GKRQTIEANLALRRARTRVEA+N +
Subjt:  WLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGV

Sequences

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CDS sequence

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ATGGATAATGAGGGATGGTTAACGGTGGCTCTGATGGGTGGTTTTGCTAGAATAGGCAATAATGAGGTCCCTATTTTAGTAAATGATGGGGAGAAGGCTAGTGACATTGA
TCCACAAGAAGCTCAGCAAACTCTTGAAATAGCAGAAGCTAACTTGAGGAAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTTAGCTCTCAGACGAGCTAGGACAC
GAGTAGAGGCTATCAATGGCGTACCTACCCCTCTTAGCAAAGAGCCAGAGAAACTTTTTAGTTATGAATCGGGAATAGAACCAATGGGCGATGCTTGGAATCATATCCGT
GGCTACTGCAGTTTTACGGGTCTGCCTGTCCCCAATAATTAA

mRNA sequence

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Protein sequence

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MDNEGWLTVALMGGFARIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPTPLSKEPEKLFSYESGIEPMGDAWNHIR
GYCSFTGLPVPNN

CmaCh00G003100 (gene) of Cucurbita maxima (Rimu) v1.1 genome