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CmaCh00G004090 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh00G004090
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionIsoleucyl-tRNA synthetase
Genome locationCma_Chr00:31572212..31574166
RNA-Seq ExpressionCmaCh00G004090
SyntenyCmaCh00G004090
Gene Ontology termsGO:0006428 - isoleucyl-tRNA aminoacylation (biological process)
GO:0106074 - aminoacyl-tRNA metabolism involved in translational fidelity (biological process)
GO:0002161 - aminoacyl-tRNA editing activity (molecular function)
GO:0004822 - isoleucine-tRNA ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049496.1 isoleucine--tRNA ligase [Cucumis melo var. makuwa]5.7e-0470.45Show/hide
Query:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
        +EANMP  +SFAAGSSA KCKEATK  IQTPSY V  Q +SS L
Subjt:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
KAA0049496.1 isoleucine--tRNA ligase [Cucumis melo var. makuwa]1.8e-0282.76Show/hide
Query:  HVFQLRTEVNKVLEVARTGKLIGSSLEAK
        ++ +LRTEVNKVLE ARTGKLIGSSLEAK
Subjt:  HVFQLRTEVNKVLEVARTGKLIGSSLEAK
KHG06246.1 Isoleucine--tRNA ligase [Gossypium arboreum]2.6e-0477.78Show/hide
Query:  YVNVLMLHVFQLRTEVNKVLEVARTGKLIGSSLEAK
        Y N     +FQLRTEVNKVLE+ARTGKLIGSSLEAK
Subjt:  YVNVLMLHVFQLRTEVNKVLEVARTGKLIGSSLEAK
XP_008438885.1 PREDICTED: isoleucine--tRNA ligase, chloroplastic/mitochondrial [Cucumis melo]1.8e-0282.76Show/hide
Query:  HVFQLRTEVNKVLEVARTGKLIGSSLEAK
        ++ +LRTEVNKVLE ARTGKLIGSSLEAK
Subjt:  HVFQLRTEVNKVLEVARTGKLIGSSLEAK
XP_008438885.1 PREDICTED: isoleucine--tRNA ligase, chloroplastic/mitochondrial [Cucumis melo]5.7e-0470.45Show/hide
Query:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
        +EANMP  +SFAAGSSA KCKEATK  IQTPSY V  Q +SS L
Subjt:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
XP_038893223.1 isoleucine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [Benincasa hispida]4.4e-0472.73Show/hide
Query:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
        +EANMP  +SFAAGSSALKCKEATKS IQT SY V  Q +SS L
Subjt:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
XP_038893223.1 isoleucine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [Benincasa hispida]1.8e-0282.76Show/hide
Query:  HVFQLRTEVNKVLEVARTGKLIGSSLEAK
        ++ +LRTEVNKVLE ARTGKLIGSSLEAK
Subjt:  HVFQLRTEVNKVLEVARTGKLIGSSLEAK
XP_038893223.1 isoleucine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [Benincasa hispida]5.7e-0470.45Show/hide
Query:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
        +EANMP  +SFAAGSSA KCKEATK  IQTPSY V  Q +SS L
Subjt:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
TrEMBL top hitse value%identityAlignment
A0A0B0N507 Isoleucyl-tRNA synthetase1.2e-0477.78Show/hide
Query:  YVNVLMLHVFQLRTEVNKVLEVARTGKLIGSSLEAK
        Y N     +FQLRTEVNKVLE+ARTGKLIGSSLEAK
Subjt:  YVNVLMLHVFQLRTEVNKVLEVARTGKLIGSSLEAK
A0A1S3AY52 Isoleucyl-tRNA synthetase2.8e-0470.45Show/hide
Query:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
        +EANMP  +SFAAGSSA KCKEATK  IQTPSY V  Q +SS L
Subjt:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
A0A1S3AY52 Isoleucyl-tRNA synthetase8.9e-0382.76Show/hide
Query:  HVFQLRTEVNKVLEVARTGKLIGSSLEAK
        ++ +LRTEVNKVLE ARTGKLIGSSLEAK
Subjt:  HVFQLRTEVNKVLEVARTGKLIGSSLEAK
A0A5A7U5N1 Isoleucyl-tRNA synthetase2.8e-0470.45Show/hide
Query:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
        +EANMP  +SFAAGSSA KCKEATK  IQTPSY V  Q +SS L
Subjt:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
A0A5A7U5N1 Isoleucyl-tRNA synthetase8.9e-0382.76Show/hide
Query:  HVFQLRTEVNKVLEVARTGKLIGSSLEAK
        ++ +LRTEVNKVLE ARTGKLIGSSLEAK
Subjt:  HVFQLRTEVNKVLEVARTGKLIGSSLEAK
A0A5A7U5N1 Isoleucyl-tRNA synthetase2.8e-0470.45Show/hide
Query:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
        +EANMP  +SFAAGSSA KCKEATK  IQTPSY V  Q +SS L
Subjt:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
A0A5D3D0J5 Isoleucyl-tRNA synthetase2.8e-0470.45Show/hide
Query:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
        +EANMP  +SFAAGSSA KCKEATK  IQTPSY V  Q +SS L
Subjt:  IEANMPPISSFAAGSSALKCKEATKSLIQTPSYGV--QFLSSLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G49030.1 tRNA synthetase class I (I, L, M and V) family protein1.6e-0475Show/hide
Query:  VFQLRTEVNKVLEVARTGKLIGSSLEAK
        + +LRTEVNKVLE+AR  K+IGSSLEAK
Subjt:  VFQLRTEVNKVLEVARTGKLIGSSLEAK
AT5G49030.3 tRNA synthetase class I (I, L, M and V) family protein1.6e-0475Show/hide
Query:  VFQLRTEVNKVLEVARTGKLIGSSLEAK
        + +LRTEVNKVLE+AR  K+IGSSLEAK
Subjt:  VFQLRTEVNKVLEVARTGKLIGSSLEAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCTATCGCTCCGAGGATGAAGAACAAGAGGCTCTGCAAAATAATTGAGGCTAATATGCCGCCGATCTCGTCGTTTGCCGCTGGCTCTTCGGCATTGAAG
TGCAAGGAAGCCACTAAATCTCTGATTCAAACGCCTTCTTATGGAGTACAATTTCTCTCTTCCCTTCTGTATCTCTATGTGTGCGCCAATCTGTTTGAATTACGA
ATTGTGGAAAATGGTGTTTACCTTATTGATCAAATCTACTACGACCCTTATTCTGGATTGCCTTATGTTAATGTACTCATGTTACATGTTTTTCAGCTAAGAACC
GAGGTGAATAAAGTCCTGGAAGTTGCTCGAACCGGAAAGTTGATCGGTTCAAGCTTAGAGGCTAAAAGTCCATCTGCATACCTCTGGAGACGGTCTGGCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCTATCGCTCCGAGGATGAAGAACAAGAGGCTCTGCAAAATAATTGAGGCTAATATGCCGCCGATCTCGTCGTTTGCCGCTGGCTCTTCGGCATTGAAG
TGCAAGGAAGCCACTAAATCTCTGATTCAAACGCCTTCTTATGGAGTACAATTTCTCTCTTCCCTTCTGTATCTCTATGTGTGCGCCAATCTGTTTGAATTACGA
ATTGTGGAAAATGGTGTTTACCTTATTGATCAAATCTACTACGACCCTTATTCTGGATTGCCTTATGTTAATGTACTCATGTTACATGTTTTTCAGCTAAGAACC
GAGGTGAATAAAGTCCTGGAAGTTGCTCGAACCGGAAAGTTGATCGGTTCAAGCTTAGAGGCTAAAAGTCCATCTGCATACCTCTGGAGACGGTCTGGCTTCTAA
Protein sequenceShow/hide protein sequence
MLPIAPRMKNKRLCKIIEANMPPISSFAAGSSALKCKEATKSLIQTPSYGVQFLSSLLYLYVCANLFELRIVENGVYLIDQIYYDPYSGLPYVNVLMLHVFQLRT
EVNKVLEVARTGKLIGSSLEAKSPSAYLWRRSGF