; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh00G004580 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh00G004580
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationCma_Chr00:34511804..34512465
RNA-Seq ExpressionCmaCh00G004580
SyntenyCmaCh00G004580
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0043457 - regulation of cellular respiration (biological process)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4309065.1 unnamed protein product [Prunus armeniaca]1.4e-4557.92Show/hide
Query:  PMPGARRCRCQEHADAEACQKAHAASHDRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPPDNFKHYLTLFSKSFSSFPR-
        P   AR  +   HA+      A AA HDR D V+  ++ A ALAA +IRIG  P+ IGG A   STSD G SPAPIRFPPDNFKH LTLFSKSFSSFPR 
Subjt:  PMPGARRCRCQEHADAEACQKAHAASHDRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPPDNFKHYLTLFSKSFSSFPR-

Query:  --------------------------------APRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILVSFFSS
                                        APRGATGS  NGALTLSGA FQ T AR  AEDASPDYNS+  GARFSSWA+PGSLAVT+GILVSFFSS
Subjt:  --------------------------------APRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILVSFFSS

Query:  AY
        AY
Subjt:  AY

KAF7143454.1 hypothetical protein RHSIM_Rhsim05G0123300 [Rhododendron simsii]6.9e-4552.51Show/hide
Query:  SDSLVRVSRRVKWGAHRPMPGARRCRCQEHADAEACQKAHAASHDRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPPDNF
        +DSLVRVSRR +W AH P+PGARRCR        +  KAHAASHDR + V+T +T +WALA+V IR GP P+SIGG  +       G    P   P   F
Subjt:  SDSLVRVSRRVKWGAHRPMPGARRCRCQEHADAEACQKAHAASHDRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPPDNF

Query:  KHYLTLFSKSFSSF---------------------------------PRAPRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWAL
        +       K    F                                 P APRGATGSE +GALTLSGAPFQGT AR VAEDASPDYNSN+E ARFSSWA+
Subjt:  KHYLTLFSKSFSSF---------------------------------PRAPRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWAL

Query:  PGSLAVTKGILVSFFSSAY
        PGSLAVT+GILVSFFSSAY
Subjt:  PGSLAVTKGILVSFFSSAY

RXI09635.1 hypothetical protein DVH24_018954 [Malus domestica]3.0e-4875.18Show/hide
Query:  AHAASHDRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPPDNFKHYLTLFSKSFSSFPRAPRGATGSERNGALTLSGAPFQ
        A AA HDR D V++ V+ A ALAA +IR+GP P+ IGG A   STSD G SPAPIRFPPDNFKH LTLFSKSFSSFPRAPRGATGS  NGALTLSGA FQ
Subjt:  AHAASHDRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPPDNFKHYLTLFSKSFSSFPRAPRGATGSERNGALTLSGAPFQ

Query:  GTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILV
         T AR  AEDASPDYNSN +GARFSSWA+PGSLAVT+GIL+
Subjt:  GTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILV

THU42866.1 hypothetical protein C4D60_Mb00t00580 [Musa balbisiana]5.6e-4764.02Show/hide
Query:  MSDSLVRVSRRVKWGAHRPMPGARRCRCQEHADAEACQKAHAASH--DRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPP
        MSDSLVRVSRRV WGAH PMP + R     HAD         A H  DR D + ++     A A  + RI P P+  GG A   S SD G SP PIRFPP
Subjt:  MSDSLVRVSRRVKWGAHRPMPGARRCRCQEHADAEACQKAHAASH--DRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPP

Query:  DNFKHYLTLFSKSFSSFPRAPRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILVSFFSSAY
         NFKH LTLFSKSFSSFPR      GSE +GALTL GAPFQGT AR VAEDASPDYNS+D  ARFSSWA PGSLAVTKGILVSFFSSAY
Subjt:  DNFKHYLTLFSKSFSSFPRAPRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILVSFFSSAY

THU42874.1 hypothetical protein C4D60_Mb00t00660 [Musa balbisiana]2.6e-4461.38Show/hide
Query:  MSDSLVRVSRRVKWGAHRPMPGARRCRCQEHADAEACQKAHAASH--DRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPP
        MSDSLVRVSRRV WGAH PMP + R     HAD         A H  DR D + ++     A A  + RI P P+  GG A   S SD G SP PIRFPP
Subjt:  MSDSLVRVSRRVKWGAHRPMPGARRCRCQEHADAEACQKAHAASH--DRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPP

Query:  DNFKHYLTLFSKSFSSFPRAPRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILVSFFSSAY
         NFKH LTLFSKSFSSFPR      GSE +GALTL GAPFQGT AR VAEDASPDYNS+D  ARFSSWA PGSLAVTKGILVS F++ +
Subjt:  DNFKHYLTLFSKSFSSFPRAPRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILVSFFSSAY

TrEMBL top hitse value%identityAlignment
A0A498KVD0 Uncharacterized protein1.4e-4875.18Show/hide
Query:  AHAASHDRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPPDNFKHYLTLFSKSFSSFPRAPRGATGSERNGALTLSGAPFQ
        A AA HDR D V++ V+ A ALAA +IR+GP P+ IGG A   STSD G SPAPIRFPPDNFKH LTLFSKSFSSFPRAPRGATGS  NGALTLSGA FQ
Subjt:  AHAASHDRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPPDNFKHYLTLFSKSFSSFPRAPRGATGSERNGALTLSGAPFQ

Query:  GTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILV
         T AR  AEDASPDYNSN +GARFSSWA+PGSLAVT+GIL+
Subjt:  GTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILV

A0A4S8I1L8 Uncharacterized protein1.4e-4362.64Show/hide
Query:  MSDSLVRVSRRVKWGAHRPMPGARRCRCQEHADAEACQKAHAASH--DRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPP
        MSDSLVRVSRRV WGAH PMP + R     HAD         A H  DR D + ++     A A  + RI P P+  GG A   S SD G SP PIRFPP
Subjt:  MSDSLVRVSRRVKWGAHRPMPGARRCRCQEHADAEACQKAHAASH--DRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPP

Query:  DNFKHYLTLFSKSFSSFPRAPRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILV
         NFKH LTLFSKSFSSFPR      GSE +GALTL GAPFQGT AR VAEDASPDYNS+D  ARFSSWA PGSLAVTKGILV
Subjt:  DNFKHYLTLFSKSFSSFPRAPRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILV

A0A4S8I781 Uncharacterized protein2.7e-4764.02Show/hide
Query:  MSDSLVRVSRRVKWGAHRPMPGARRCRCQEHADAEACQKAHAASH--DRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPP
        MSDSLVRVSRRV WGAH PMP + R     HAD         A H  DR D + ++     A A  + RI P P+  GG A   S SD G SP PIRFPP
Subjt:  MSDSLVRVSRRVKWGAHRPMPGARRCRCQEHADAEACQKAHAASH--DRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPP

Query:  DNFKHYLTLFSKSFSSFPRAPRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILVSFFSSAY
         NFKH LTLFSKSFSSFPR      GSE +GALTL GAPFQGT AR VAEDASPDYNS+D  ARFSSWA PGSLAVTKGILVSFFSSAY
Subjt:  DNFKHYLTLFSKSFSSFPRAPRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILVSFFSSAY

A0A4S8I7Z1 Uncharacterized protein1.3e-4461.38Show/hide
Query:  MSDSLVRVSRRVKWGAHRPMPGARRCRCQEHADAEACQKAHAASH--DRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPP
        MSDSLVRVSRRV WGAH PMP + R     HAD         A H  DR D + ++     A A  + RI P P+  GG A   S SD G SP PIRFPP
Subjt:  MSDSLVRVSRRVKWGAHRPMPGARRCRCQEHADAEACQKAHAASH--DRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPP

Query:  DNFKHYLTLFSKSFSSFPRAPRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILVSFFSSAY
         NFKH LTLFSKSFSSFPR      GSE +GALTL GAPFQGT AR VAEDASPDYNS+D  ARFSSWA PGSLAVTKGILVS F++ +
Subjt:  DNFKHYLTLFSKSFSSFPRAPRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILVSFFSSAY

A0A6J5XAX6 Uncharacterized protein6.7e-4657.92Show/hide
Query:  PMPGARRCRCQEHADAEACQKAHAASHDRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPPDNFKHYLTLFSKSFSSFPR-
        P   AR  +   HA+      A AA HDR D V+  ++ A ALAA +IRIG  P+ IGG A   STSD G SPAPIRFPPDNFKH LTLFSKSFSSFPR 
Subjt:  PMPGARRCRCQEHADAEACQKAHAASHDRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPPDNFKHYLTLFSKSFSSFPR-

Query:  --------------------------------APRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILVSFFSS
                                        APRGATGS  NGALTLSGA FQ T AR  AEDASPDYNS+  GARFSSWA+PGSLAVT+GILVSFFSS
Subjt:  --------------------------------APRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILVSFFSS

Query:  AY
        AY
Subjt:  AY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCAAATGGGGAGCCCACAGGCCGATGCCAGGAGCACGCAGATGCCGATGCCAGGAGCACGCAGATGCCGAAGCATG
CCAGAAGGCGCATGCTGCCAGCCACGATCGGGACGATGACGTCACCACAAGCGTAACCAAGGCCTGGGCTTTGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCCAAAT
CGATTGGCGGACTGGCTTACCACCTTTCCACATCCGACGGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCTGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAG
TCCTTTTCATCTTTCCCTCGCGCGCCTCGTGGTGCGACAGGGTCCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTCTGCTCGGTTCGTCGC
TGAGGACGCTTCTCCAGACTACAATTCGAACGACGAGGGCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTAAGTTTCTTTT
CCTCCGCTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCAAATGGGGAGCCCACAGGCCGATGCCAGGAGCACGCAGATGCCGATGCCAGGAGCACGCAGATGCCGAAGCATG
CCAGAAGGCGCATGCTGCCAGCCACGATCGGGACGATGACGTCACCACAAGCGTAACCAAGGCCTGGGCTTTGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCCAAAT
CGATTGGCGGACTGGCTTACCACCTTTCCACATCCGACGGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCTGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAG
TCCTTTTCATCTTTCCCTCGCGCGCCTCGTGGTGCGACAGGGTCCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTCTGCTCGGTTCGTCGC
TGAGGACGCTTCTCCAGACTACAATTCGAACGACGAGGGCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTAAGTTTCTTTT
CCTCCGCTTATTAA
Protein sequenceShow/hide protein sequence
MSDSLVRVSRRVKWGAHRPMPGARRCRCQEHADAEACQKAHAASHDRDDDVTTSVTKAWALAAVSIRIGPCPKSIGGLAYHLSTSDGGTSPAPIRFPPDNFKHYLTLFSK
SFSSFPRAPRGATGSERNGALTLSGAPFQGTSARFVAEDASPDYNSNDEGARFSSWALPGSLAVTKGILVSFFSSAY