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CmaCh00G005010 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh00G005010
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionAuxin-responsive protein
Genome locationCma_Chr00:36140609..36141037
RNA-Seq ExpressionCmaCh00G005010
SyntenyCmaCh00G005010
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain
IPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON40153.1 AUX/IAA protein [Parasponia andersonii]8.7e-33100Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

XP_008438588.1 PREDICTED: auxin-responsive protein IAA14 [Cucumis melo]8.7e-33100Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

XP_028784156.1 auxin-responsive protein IAA14-like [Prosopis alba]8.7e-33100Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

XP_028784969.1 auxin-responsive protein IAA14-like [Prosopis alba]8.7e-33100Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

XP_038877086.1 auxin-responsive protein IAA14-like [Benincasa hispida]8.7e-33100Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

TrEMBL top hitse value%identityAlignment
A0A0A0LA18 Auxin-responsive protein4.2e-33100Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

A0A1S3AWR5 Auxin-responsive protein4.2e-33100Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

A0A2P5AUB9 Auxin-responsive protein4.2e-33100Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

A0A2P5DXT4 Auxin-responsive protein4.2e-33100Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

B9RTF4 Auxin-responsive protein9.4e-3398.59Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSR+
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

SwissProt top hitse value%identityAlignment
O24407 Auxin-responsive protein IAA161.2e-3290.14Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        M DFMNESKL+DLLN S+YVPTYEDKDGDWMLVGDVPWEMFVDSCKR+RIMKGSEAIGLAPRA+EKCK+RS
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

P0C132 Auxin-responsive protein IAA303.8e-3188.57Show/hide
Query:  IDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        ++ MNESK+ DLLN SEYVPTYEDKDGDWMLVGDVPWEMFV+SCKRLRIMKGSEAIGLAPRAMEKCK+RS
Subjt:  IDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

P93830 Auxin-responsive protein IAA173.8e-3185.92Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        MIDFMNE KLMDL+NS +YVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MKGS+AIGLAPRAMEKCKSR+
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

Q38825 Auxin-responsive protein IAA72.6e-3291.67Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEK-CKSRS
        MIDFMNESKLM+LLNSSEYVP+YEDKDGDWMLVGDVPWEMFV+SCKRLRIMKGSEA+GLAPRAMEK CK+RS
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEK-CKSRS

Q38832 Auxin-responsive protein IAA144.5e-3291.55Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        MIDFMNESK+MDLLNSSEYVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGLAPRAMEK K+RS
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

Arabidopsis top hitse value%identityAlignment
AT1G04250.1 AUX/IAA transcriptional regulator family protein2.7e-3285.92Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        MIDFMNE KLMDL+NS +YVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MKGS+AIGLAPRAMEKCKSR+
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

AT3G04730.1 indoleacetic acid-induced protein 168.4e-3490.14Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        M DFMNESKL+DLLN S+YVPTYEDKDGDWMLVGDVPWEMFVDSCKR+RIMKGSEAIGLAPRA+EKCK+RS
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

AT3G23050.1 indole-3-acetic acid 71.9e-3391.67Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEK-CKSRS
        MIDFMNESKLM+LLNSSEYVP+YEDKDGDWMLVGDVPWEMFV+SCKRLRIMKGSEA+GLAPRAMEK CK+RS
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEK-CKSRS

AT4G14550.1 indole-3-acetic acid inducible 143.2e-3391.55Show/hide
Query:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        MIDFMNESK+MDLLNSSEYVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGLAPRAMEK K+RS
Subjt:  MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS

AT4G29080.1 phytochrome-associated protein 24.5e-2778.26Show/hide
Query:  DFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS
        D +NES+L DLL  SEYV TYEDKD DWMLVGDVPWEMF+ SCK+LRIMK SEAIGLAPR MEKC+SR+
Subjt:  DFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGATTTCATGAACGAAAGCAAGTTGATGGATCTTCTAAACAGCTCTGAATACGTGCCAACCTATGAAGATAAGGATGGTGATTGGATGCTGGTGGGAGATGTCCC
ATGGGAGATGTTCGTTGATTCATGCAAGCGCTTAAGGATAATGAAGGGATCGGAAGCTATCGGGCTCGCCCCAAGAGCGATGGAAAAATGCAAAAGCAGAAGCTGA
mRNA sequenceShow/hide mRNA sequence
GGTGAGTATGGGGCCCAAGGAATGATAGATTTCATGAACGAAAGCAAGTTGATGGATCTTCTAAACAGCTCTGAATACGTGCCAACCTATGAAGATAAGGATGGTGATTG
GATGCTGGTGGGAGATGTCCCATGGGAGATGTTCGTTGATTCATGCAAGCGCTTAAGGATAATGAAGGGATCGGAAGCTATCGGGCTCGCCCCAAGAGCGATGGAAAAAT
GCAAAAGCAGAAGCTGAAAGAGGAGTCTGATTGCAATATTTGTGTTTTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRS