; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh00G005270 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh00G005270
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr00:38562052..38563315
RNA-Seq ExpressionCmaCh00G005270
SyntenyCmaCh00G005270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5201798.1 hypothetical protein FRX31_008615, partial [Thalictrum thalictroides]4.7e-6353.87Show/hide
Query:  ASPQRRTLDEAHVGRPKAPNSTPPCTLCRRSDHPPSRRQHKLEGHIPCPTSLMSHAQRHPIPTSRTCSGTTRLQNIGLPQGWPDGVTTTPHARRGSCWTP
        ASPQR TL+E HVGRPKA NSTPPC  CRR+ H PS  Q KLEGHIPC TSLMSHAQ H  P  + CS TT+                            
Subjt:  ASPQRRTLDEAHVGRPKAPNSTPPCTLCRRSDHPPSRRQHKLEGHIPCPTSLMSHAQRHPIPTSRTCSGTTRLQNIGLPQGWPDGVTTTPHARRGSCWTP

Query:  EGTQLHPTLHALSSFRPSTIPKAAQGCPKDGPTASPQRRTLDDAHVGRPKAPNSTPPCTLCRR-SDHP-------PSRRQHKLEGHIPCPTSLMSHAQRH
              P+ H  S  R   IP+              QR TL++ H  RPKAP STPPC    R S+HP       P RRQH+   +IPC T LMSHAQRH
Subjt:  EGTQLHPTLHALSSFRPSTIPKAAQGCPKDGPTASPQRRTLDDAHVGRPKAPNSTPPCTLCRR-SDHP-------PSRRQHKLEGHIPCPTSLMSHAQRH

Query:  PIPTSRTCSGPTRLQNIGLPQGWPDGVTTTPHARRGSCWTPEGTQLHPTLHALSSFRPSTIPKAAQVRRRH
        PIPTSRTCSG TRLQNIGL QGWP  +TTT H +RGSC TPEGT+LHPTLH  SS++PSTI K AQVRR+H
Subjt:  PIPTSRTCSGPTRLQNIGLPQGWPDGVTTTPHARRGSCWTPEGTQLHPTLHALSSFRPSTIPKAAQVRRRH
TrEMBL top hitse value%identityAlignment
A0A7J6WYY5 Uncharacterized protein (Fragment)2.3e-6353.87Show/hide
Query:  ASPQRRTLDEAHVGRPKAPNSTPPCTLCRRSDHPPSRRQHKLEGHIPCPTSLMSHAQRHPIPTSRTCSGTTRLQNIGLPQGWPDGVTTTPHARRGSCWTP
        ASPQR TL+E HVGRPKA NSTPPC  CRR+ H PS  Q KLEGHIPC TSLMSHAQ H  P  + CS TT+                            
Subjt:  ASPQRRTLDEAHVGRPKAPNSTPPCTLCRRSDHPPSRRQHKLEGHIPCPTSLMSHAQRHPIPTSRTCSGTTRLQNIGLPQGWPDGVTTTPHARRGSCWTP

Query:  EGTQLHPTLHALSSFRPSTIPKAAQGCPKDGPTASPQRRTLDDAHVGRPKAPNSTPPCTLCRR-SDHP-------PSRRQHKLEGHIPCPTSLMSHAQRH
              P+ H  S  R   IP+              QR TL++ H  RPKAP STPPC    R S+HP       P RRQH+   +IPC T LMSHAQRH
Subjt:  EGTQLHPTLHALSSFRPSTIPKAAQGCPKDGPTASPQRRTLDDAHVGRPKAPNSTPPCTLCRR-SDHP-------PSRRQHKLEGHIPCPTSLMSHAQRH

Query:  PIPTSRTCSGPTRLQNIGLPQGWPDGVTTTPHARRGSCWTPEGTQLHPTLHALSSFRPSTIPKAAQVRRRH
        PIPTSRTCSG TRLQNIGL QGWP  +TTT H +RGSC TPEGT+LHPTLH  SS++PSTI K AQVRR+H
Subjt:  PIPTSRTCSGPTRLQNIGLPQGWPDGVTTTPHARRGSCWTPEGTQLHPTLHALSSFRPSTIPKAAQVRRRH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCACGCCCAAAGGCACCCGATTCCAACCAGCCGAACATGTTCTGGCACCACACGCCTTCAGAAAAACATAGGGCTGCCCCAAGGATGGCCCGACGGCGTCACCAC
AATGCCGCACGCTCGACGAGGCTCATGTTGGATGCCCGAAGGCACCCAACTCCACCCCACCTTGCACGCTTTGTCGTCGTTCCGACCATCCACCATCCCGAAGGCAGCAC
AAGGCTGCCCCAAGGATGGCCCGACTGCGTCACCACAACGTCGCACGCTCGACGAGGCTCATGTTGGACGCCCGAAGGCACCCAACTCCACCCCACCTTGCACGCTTTGT
CGTCGTTCCGACCATCCACCATCCCGAAGGCAGCACAAGTTAGAAGGCCACATTCCATGCCCAACTAGTCTCATGTCGCACGCCCAAAGGCACCCGATTCCAACCAGCCG
AACATGTTCTGGCACCACACGCCTTCAAAACATAGGGCTGCCCCAAGGATGGCCCGACGGCGTCACCACAACGCCGCACGCTCGACGAGGCTCATGTTGGACGCCCGAAG
GCACCCAACTCCACCCCACCTTGCACGCTTTGTCGTCGTTCCGACCATCCACCATCCCGAAGGCAGCACAAGGCTGCCCCAAGGATGGCCCGACAGCATCACCACAACGC
CGCACGCTCGACGATGCTCATGTTGGACGCCCGAAGGCACCCAACTCCACCCCACCTTGCACGCTTTGTCGTCGTTCCGACCATCCACCATCCCGAAGGCAGCACAAGTT
AGAAGGCCACATTCCATGCCCAACTAGTCTCATGTCGCACGCCCAAAGGCACCCGATTCCAACCAGCCGAACATGTTCTGGCCCCACACGCCTTCAAAACATAGGGCTGC
CCCAAGGATGGCCCGACGGCGTCACCACAACGCCGCACGCTCGACGAGGCTCATGTTGGACGCCCGAAGGCACCCAACTCCACCCCACCTTGCACGCTTTGTCGTCGTTC
CGACCATCCACCATCCCGAAGGCAGCACAAGTTAGAAGGCGACATTCCATGCCCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGCACGCCCAAAGGCACCCGATTCCAACCAGCCGAACATGTTCTGGCACCACACGCCTTCAGAAAAACATAGGGCTGCCCCAAGGATGGCCCGACGGCGTCACCAC
AATGCCGCACGCTCGACGAGGCTCATGTTGGATGCCCGAAGGCACCCAACTCCACCCCACCTTGCACGCTTTGTCGTCGTTCCGACCATCCACCATCCCGAAGGCAGCAC
AAGGCTGCCCCAAGGATGGCCCGACTGCGTCACCACAACGTCGCACGCTCGACGAGGCTCATGTTGGACGCCCGAAGGCACCCAACTCCACCCCACCTTGCACGCTTTGT
CGTCGTTCCGACCATCCACCATCCCGAAGGCAGCACAAGTTAGAAGGCCACATTCCATGCCCAACTAGTCTCATGTCGCACGCCCAAAGGCACCCGATTCCAACCAGCCG
AACATGTTCTGGCACCACACGCCTTCAAAACATAGGGCTGCCCCAAGGATGGCCCGACGGCGTCACCACAACGCCGCACGCTCGACGAGGCTCATGTTGGACGCCCGAAG
GCACCCAACTCCACCCCACCTTGCACGCTTTGTCGTCGTTCCGACCATCCACCATCCCGAAGGCAGCACAAGGCTGCCCCAAGGATGGCCCGACAGCATCACCACAACGC
CGCACGCTCGACGATGCTCATGTTGGACGCCCGAAGGCACCCAACTCCACCCCACCTTGCACGCTTTGTCGTCGTTCCGACCATCCACCATCCCGAAGGCAGCACAAGTT
AGAAGGCCACATTCCATGCCCAACTAGTCTCATGTCGCACGCCCAAAGGCACCCGATTCCAACCAGCCGAACATGTTCTGGCCCCACACGCCTTCAAAACATAGGGCTGC
CCCAAGGATGGCCCGACGGCGTCACCACAACGCCGCACGCTCGACGAGGCTCATGTTGGACGCCCGAAGGCACCCAACTCCACCCCACCTTGCACGCTTTGTCGTCGTTC
CGACCATCCACCATCCCGAAGGCAGCACAAGTTAGAAGGCGACATTCCATGCCCAATTAG
Protein sequenceShow/hide protein sequence
MSHAQRHPIPTSRTCSGTTRLQKNIGLPQGWPDGVTTMPHARRGSCWMPEGTQLHPTLHALSSFRPSTIPKAAQGCPKDGPTASPQRRTLDEAHVGRPKAPNSTPPCTLC
RRSDHPPSRRQHKLEGHIPCPTSLMSHAQRHPIPTSRTCSGTTRLQNIGLPQGWPDGVTTTPHARRGSCWTPEGTQLHPTLHALSSFRPSTIPKAAQGCPKDGPTASPQR
RTLDDAHVGRPKAPNSTPPCTLCRRSDHPPSRRQHKLEGHIPCPTSLMSHAQRHPIPTSRTCSGPTRLQNIGLPQGWPDGVTTTPHARRGSCWTPEGTQLHPTLHALSSF
RPSTIPKAAQVRRRHSMPN