; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh01G000140 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G000140
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description40S ribosomal protein SA
Genome locationCma_Chr01:57841..60258
RNA-Seq ExpressionCmaCh01G000140
SyntenyCmaCh01G000140
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606673.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]1.2e-16898.01Show/hide
Query:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA
        MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQ+IIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA
        VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPV SVEWAQEPVALASDGWDVAVPPPAP  EG  
Subjt:  VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA

Query:  P
        P
Subjt:  P

XP_008460336.2 PREDICTED: 40S ribosomal protein SA-like [Cucumis melo]3.3e-16193.16Show/hide
Query:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA
        MAT TAPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVGIENPQ+IIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEK-EEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGA
        VDLFFYREPEEAKEK EEEAVAPPDYGIADYG APLVASDQWAGQISDAQWG PD++P P AA VVPPVS+VEW QEPVALASDGWD AVPPPAP  EG 
Subjt:  VDLFFYREPEEAKEK-EEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGA

Query:  APPAASW
        A PAASW
Subjt:  APPAASW

XP_022949415.1 40S ribosomal protein SA-like [Cucurbita moschata]6.4e-17398.69Show/hide
Query:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA
        MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQ+IIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA
        VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPV SVEWAQEPVALASDGWDVAVPPPAP  EGAA
Subjt:  VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA

Query:  PPAASW
        PPAASW
Subjt:  PPAASW

XP_022998206.1 40S ribosomal protein SA-like [Cucurbita maxima]1.4e-175100Show/hide
Query:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA
        MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA
        VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA
Subjt:  VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA

Query:  PPAASW
        PPAASW
Subjt:  PPAASW

XP_031738662.1 40S ribosomal protein SA isoform X2 [Cucumis sativus]2.3e-15992.21Show/hide
Query:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA
        MAT TAPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVGIENPQ+IIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEK-EEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAA-AVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEG
        VDLFFYREPEEAKEK EEEAVAPPDYGIADYG APLVASDQWAGQISDAQWG PD++P P AA  VVPPVS+VEW QEPVA+ASDGWD A PPPAP  EG
Subjt:  VDLFFYREPEEAKEK-EEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAA-AVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEG

Query:  AAPPAASW
         A PAASW
Subjt:  AAPPAASW

TrEMBL top hitse value%identityAlignment
A0A0A0L946 40S ribosomal protein SA2.8e-15891.91Show/hide
Query:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA
        MAT TAPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVGIENPQ+IIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEK-EEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAA-AVVPPVSSVEWAQEP-VALASDGWDVAVPPPAPPTE
        VDLFFYREPEEAKEK EEEAVAPPDYGIADYG APLVASDQWAGQISDAQWG PD++P P AA  VVPPVS+VEW QEP VA+ASDGWD A PPPAP  E
Subjt:  VDLFFYREPEEAKEK-EEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAA-AVVPPVSSVEWAQEP-VALASDGWDVAVPPPAPPTE

Query:  GAAPPAASW
        G A PAASW
Subjt:  GAAPPAASW

A0A1S3CDH5 40S ribosomal protein SA1.6e-16193.16Show/hide
Query:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA
        MAT TAPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVGIENPQ+IIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEK-EEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGA
        VDLFFYREPEEAKEK EEEAVAPPDYGIADYG APLVASDQWAGQISDAQWG PD++P P AA VVPPVS+VEW QEPVALASDGWD AVPPPAP  EG 
Subjt:  VDLFFYREPEEAKEK-EEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGA

Query:  APPAASW
        A PAASW
Subjt:  APPAASW

A0A6J1GCP6 40S ribosomal protein SA3.1e-17398.69Show/hide
Query:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA
        MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQ+IIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA
        VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPV SVEWAQEPVALASDGWDVAVPPPAP  EGAA
Subjt:  VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA

Query:  PPAASW
        PPAASW
Subjt:  PPAASW

A0A6J1IX68 40S ribosomal protein SA1.4e-15791.23Show/hide
Query:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA
        MAT T PRQLSQKEADIQMMLA+EVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVGIENPQ+IIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEKEEE--AVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEG
        VDLFFYREPEEAKEKEEE    AP DYGIAD+GAAPLV SDQWAGQISDAQWG PDVVPPP AA V PPVS+VEW+QEPVA +SDGW  AVPPPAP  EG
Subjt:  VDLFFYREPEEAKEKEEE--AVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEG

Query:  AAPPAASW
         APPAASW
Subjt:  AAPPAASW

A0A6J1K9M4 40S ribosomal protein SA6.6e-176100Show/hide
Query:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA
        MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA
        VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA
Subjt:  VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA

Query:  PPAASW
        PPAASW
Subjt:  PPAASW

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA3.6e-12675.47Show/hide
Query:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA
        MAT T  R LSQKE DIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIV IENP++IIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI  GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEKE-EEAVAPPDYGIADYGAAPL--VASDQWAGQISDA-QWGDPDVVPPPVAAAVVPPVSSVEWAQ-----EPVALASDGWDVAVPP
        VDLFFYREPEE KE+E +E VA PDYGI DY A  L  +    W   I+DA QWG    VP   A A +P V    W         V +A+DGWD A  P
Subjt:  VDLFFYREPEEAKEKE-EEAVAPPDYGIADYGAAPL--VASDQWAGQISDA-QWGDPDVVPPPVAAAVVPPVSSVEWAQ-----EPVALASDGWDVAVPP

Query:  PA---PPTEGAAPPAASW
        P    PP     PP A W
Subjt:  PA---PPTEGAAPPAASW

O22518 40S ribosomal protein SA9.3e-12778.23Show/hide
Query:  ATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAI
        A    PRQLSQKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTWEKLQ+AARVIV IENPQ+IIVQSARPYGQRAVLKFAQ+TGAHAI
Subjt:  ATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAI

Query:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMV
        AGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDVMV
Subjt:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMV

Query:  DLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEW---AQEPVALASDGWDVAVPPP
        DLFFYREPEEAK++EEE     DY I D+ A  + A  QW G I D  W   D VP P     +P V  V W   A+ P A   D W  AVPPP
Subjt:  DLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEW---AQEPVALASDGWDVAVPPP

O65751 40S ribosomal protein SA6.1e-12676.38Show/hide
Query:  MATGTAP-RQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAH
        MAT TAP RQL+QKEADIQMMLAA+VHLGTKNCNFQMERY+FKRRNDGIYIINLGKTW+KL +AAR+IV IEN Q+IIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGTAP-RQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAP-PTEG
        MVDLFFYREPEEAK+ EE+ VA PDY IAD+  + + +  QW   I D  W   D VP P     +P V +V WA  P A+A D W  AVPPP   PT G
Subjt:  MVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAP-PTEG

Query:  -AAPPAASW
          + PA  W
Subjt:  -AAPPAASW

O80377 40S ribosomal protein SA1.3e-12376.24Show/hide
Query:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA
        MA+G   R+LS  EADIQMM AAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV IENPQ+IIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I  GHKW+VM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA
        VDLFFYREPEE K++EEE +   DY +ADY AAP+  +DQW   I DAQWG  DVV P  +A     V +  W  +   +A DGWD A  PP P   G  
Subjt:  VDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA

Query:  PPA
         PA
Subjt:  PPA

Q08682 40S ribosomal protein Sa-18.5e-12073.99Show/hide
Query:  QLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPG
        QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIV IENPQ+IIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPG
Subjt:  QLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYRE

Query:  PEEAKEKEEEAVAPPDYGIADYGAAP-----LVASDQW-AGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEG
        PEE K ++E+   P     A+YGA P     +V  DQW   QI DA W  P     P++AA     ++  W+    A A  GW+ A PP   P  G
Subjt:  PEEAKEKEEEAVAPPDYGIADYGAAP-----LVASDQW-AGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEG

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA6.0e-12173.99Show/hide
Query:  QLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPG
        QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIV IENPQ+IIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPG
Subjt:  QLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYRE

Query:  PEEAKEKEEEAVAPPDYGIADYGAAP-----LVASDQW-AGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEG
        PEE K ++E+   P     A+YGA P     +V  DQW   QI DA W  P     P++AA     ++  W+    A A  GW+ A PP   P  G
Subjt:  PEEAKEKEEEAVAPPDYGIADYGAAP-----LVASDQW-AGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEG

AT1G72370.2 40s ribosomal protein SA1.5e-11973.65Show/hide
Query:  QLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPG
        QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIV IENPQ+IIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPG
Subjt:  QLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYRE

Query:  PEEAKEKEEEAVAPPDYGIADYGAAP-----LVASDQW-AGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEG
        PEE K ++E+   P     A+YGA P     +V  DQW   QI DA W  P     P++AA     ++  W+      A  GW+ A PP   P  G
Subjt:  PEEAKEKEEEAVAPPDYGIADYGAAP-----LVASDQW-AGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEG

AT3G04770.1 40s ribosomal protein SA B7.4e-10388.89Show/hide
Query:  TAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAIAGR
        TA RQ+S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIV IENP++IIVQSARPYGQRAVLKFAQ+TG +AIAGR
Subjt:  TAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAIAGR

Query:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD
        HTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMV+
Subjt:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD

AT3G04770.2 40s ribosomal protein SA B9.0e-11775.35Show/hide
Query:  TAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAIAGR
        TA RQ+S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIV IENP++IIVQSARPYGQRAVLKFAQ+TG +AIAGR
Subjt:  TAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAIAGR

Query:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLF
        HTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMVDLF
Subjt:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLF

Query:  FYREPEEAK-EKEEEAVAPPDYGIADYGAAPLVASDQW-AGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWD
        FYREPEEAK E +EEA    DYG        +V  DQW   QISDA W   +V  P  AA  V    +  W  E  ++ + GW+
Subjt:  FYREPEEAK-EKEEEAVAPPDYGIADYGAAPLVASDQW-AGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGAACAGCACCGCGTCAGCTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACGAAGAACTGTAACTTCCAA
ATGGAGCGTTACGTTTTCAAGCGTCGAAACGATGGAATCTACATTATTAACCTTGGTAAGACATGGGAGAAACTTCAGATGGCTGCCAGAGTTATTGTGGGTATT
GAGAATCCACAGAACATCATTGTTCAGTCTGCAAGGCCTTATGGTCAGAGGGCCGTCTTGAAGTTTGCTCAACACACTGGGGCTCATGCAATAGCCGGGAGGCAT
ACCCCTGGAACCTTCACTAACCAGCTTCAGACCTCTTTCAATGAACCACGTCTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGGTGCC
CTTGGAAACATTCCTACAATTGCCTTTTGCGATACTGATTCACCAATGCGGTATGTTGATATTGGGATTCCAGCAAATAACAAGGGGAAACATAGCATTGGATGT
CTTTTCTGGCTTTTGGCAAGGATGGTTCTGCAGATGCGTGGAACAATTCGTGCAGGGCATAAATGGGACGTGATGGTGGATTTGTTTTTCTACCGAGAACCTGAG
GAGGCCAAGGAGAAAGAAGAAGAGGCTGTTGCACCTCCAGATTATGGCATTGCCGATTATGGTGCTGCTCCACTTGTTGCCTCAGATCAATGGGCTGGACAAATT
TCTGATGCTCAGTGGGGTGACCCTGATGTGGTTCCACCACCTGTAGCTGCTGCAGTTGTGCCACCTGTTTCGAGTGTTGAGTGGGCCCAAGAGCCAGTTGCTTTA
GCATCAGACGGATGGGATGTTGCAGTACCACCACCAGCACCTCCAACCGAAGGTGCTGCGCCTCCGGCTGCCAGTTGGTAG
mRNA sequenceShow/hide mRNA sequence
CTGTTCCGGCAGAAAGAAAGAAAGCCCTATCCCCTCCTGGTCTGTTCACAGGCCCCTTCTTTGAAGGCTCAACCTCCTTAAATTACTGCTATTCTGTAAACCCTA
ACACAACTCTCGATTCACAGAGATCCCGCCATGGCGACTGGAACAGCACCGCGTCAGCTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCCGCCGAGGTT
CATCTAGGCACGAAGAACTGTAACTTCCAAATGGAGCGTTACGTTTTCAAGCGTCGAAACGATGGAATCTACATTATTAACCTTGGTAAGACATGGGAGAAACTT
CAGATGGCTGCCAGAGTTATTGTGGGTATTGAGAATCCACAGAACATCATTGTTCAGTCTGCAAGGCCTTATGGTCAGAGGGCCGTCTTGAAGTTTGCTCAACAC
ACTGGGGCTCATGCAATAGCCGGGAGGCATACCCCTGGAACCTTCACTAACCAGCTTCAGACCTCTTTCAATGAACCACGTCTTCTGATACTTACTGATCCTAGA
ACTGATCATCAGCCCATCAAGGAAGGTGCCCTTGGAAACATTCCTACAATTGCCTTTTGCGATACTGATTCACCAATGCGGTATGTTGATATTGGGATTCCAGCA
AATAACAAGGGGAAACATAGCATTGGATGTCTTTTCTGGCTTTTGGCAAGGATGGTTCTGCAGATGCGTGGAACAATTCGTGCAGGGCATAAATGGGACGTGATG
GTGGATTTGTTTTTCTACCGAGAACCTGAGGAGGCCAAGGAGAAAGAAGAAGAGGCTGTTGCACCTCCAGATTATGGCATTGCCGATTATGGTGCTGCTCCACTT
GTTGCCTCAGATCAATGGGCTGGACAAATTTCTGATGCTCAGTGGGGTGACCCTGATGTGGTTCCACCACCTGTAGCTGCTGCAGTTGTGCCACCTGTTTCGAGT
GTTGAGTGGGCCCAAGAGCCAGTTGCTTTAGCATCAGACGGATGGGATGTTGCAGTACCACCACCAGCACCTCCAACCGAAGGTGCTGCGCCTCCGGCTGCCAGT
TGGTAGGGTACTAAGGGAACTATCGAGAATTCATTAATCGTTTTATGAGTTTGCTTGTTTATGTAGGGGTACCACCTTTTTTGGTTGCAAAATTGGCTTGCCTCT
TTTCTGATAATCCAGTTTTAGATTTTGAGATTGAAATTTTGACTTCAACTTTGGTATCTTGGTACAATTTTTTTGGGATATATGGAATTTACTCACCTCAAGTTT
AGTGGACATCCATCTAAATAATGACTCTAAATAATT
Protein sequenceShow/hide protein sequence
MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAIAGRH
TPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPE
EAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAAPPAASW