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CmaCh01G000180 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G000180
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUbiquitin-conjugating enzyme E2 34-like
Genome locationCma_Chr01:78928..79630
RNA-Seq ExpressionCmaCh01G000180
SyntenyCmaCh01G000180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606678.1 hypothetical protein SDJN03_00020, partial [Cucurbita argyrosperma subsp. sororia]1.6e-7694.67Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTID
        MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKA TQEETGRKWLAQ KKSKKSWKNTLFSWLN DKTSKS PKL+R SHTSNKR VHVSGPIYTGATT+D
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTID

Query:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
Subjt:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

XP_022152626.1 uncharacterized protein LOC111020302 [Momordica charantia]3.1e-5676.47Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKA--ETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLD-RISHTSNKRHVHVSGPIYTGAT
        MDDP FD+FDPR +FSKFLEEAKHHA  +DFKA   T+EE GRKWL Q+KKSKKSWK T+FSWL  DK SK  PK +    HTS+KR VHVSGPIYTGA 
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKA--ETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLD-RISHTSNKRHVHVSGPIYTGAT

Query:  TIDGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        T DGRPR RPTSGPIASLFNPSMRTEMEIPYMCLHQLTSP  +H YGPIYLVT
Subjt:  TIDGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

XP_022949073.1 uncharacterized protein LOC111452535 [Cucurbita moschata]2.3e-7594Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTID
        MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKA TQEETGRKWLAQ KKSKKSWKNTLFSWLN DKTSKS PKL+R SHTSNKR VHVSG IYTGATT+D
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTID

Query:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
Subjt:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

XP_022998123.1 uncharacterized protein LOC111492863 [Cucurbita maxima]2.1e-81100Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTID
        MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTID
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTID

Query:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
Subjt:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

XP_023525406.1 uncharacterized protein LOC111789028 [Cucurbita pepo subsp. pepo]1.3e-7090Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTID
        MDDPCFDDFDPRTNFSKFLEEAKHHAK         EETGRKWLAQQKKSKKSWKNTLFSWLN DKTSKS PKL+R SHTSNKR VHVSGPIYTGATT+D
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTID

Query:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
Subjt:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

TrEMBL top hitse value%identityAlignment
A0A0A0LC20 Uncharacterized protein1.3e-5272.19Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAET-QEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTI
        M++P FDDFD   NFSKFLEEAKHHA ++ FKA + +EET RKWLAQ+KK+KKSWKNTLFSWL  DK SKS PK ++  HT NKR V+VSGPIY+ A TI
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAET-QEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTI

Query:  DGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        DGRPR RP SGPIASLFNP+MRTE EIPYMCLHQL++P  N  YGPIYLVT
Subjt:  DGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

A0A5D3D6L0 Uncharacterized protein6.8e-4969.54Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAET-QEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTI
        M++  FDDFD   NFS FLEEAKHHA  +  KA + +EETGRK LAQ+KK+KKSWKNTLFSWL  DK SKS PK ++  HT NKR V+VSGP+Y+ ATT 
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAET-QEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTI

Query:  DGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        +GRPR RP SGPIASLFNPSMRTE EIPYMCL QL++P  NH YGPIYLVT
Subjt:  DGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

A0A6J1DIA9 uncharacterized protein LOC1110203021.5e-5676.47Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKA--ETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLD-RISHTSNKRHVHVSGPIYTGAT
        MDDP FD+FDPR +FSKFLEEAKHHA  +DFKA   T+EE GRKWL Q+KKSKKSWK T+FSWL  DK SK  PK +    HTS+KR VHVSGPIYTGA 
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKA--ETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLD-RISHTSNKRHVHVSGPIYTGAT

Query:  TIDGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        T DGRPR RPTSGPIASLFNPSMRTEMEIPYMCLHQLTSP  +H YGPIYLVT
Subjt:  TIDGRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

A0A6J1GB15 uncharacterized protein LOC1114525351.1e-7594Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTID
        MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKA TQEETGRKWLAQ KKSKKSWKNTLFSWLN DKTSKS PKL+R SHTSNKR VHVSG IYTGATT+D
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTID

Query:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
Subjt:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

A0A6J1KFX5 uncharacterized protein LOC1114928631.0e-81100Show/hide
Query:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTID
        MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTID
Subjt:  MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTID

Query:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
        GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT
Subjt:  GRPRHRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGATCCTTGTTTTGATGATTTTGATCCTCGCACCAACTTTTCCAAGTTCTTGGAAGAAGCAAAACATCATGCCAAAGAAGAGGATTTCAAGGCTGAGACACAAGA
AGAAACAGGAAGGAAATGGTTGGCACAACAGAAAAAGAGCAAGAAATCATGGAAAAACACACTCTTCTCCTGGTTGAATGGTGACAAAACGAGCAAATCTTTTCCCAAAC
TAGACAGAATTTCTCACACATCCAATAAAAGACACGTTCATGTTTCGGGTCCGATTTACACTGGAGCTACGACCATCGATGGCAGACCCCGACACCGTCCGACGTCTGGA
CCAATTGCGAGTCTCTTCAATCCAAGTATGCGAACGGAGATGGAGATCCCTTATATGTGTCTCCACCAGCTCACTAGCCCCATTCCTAATCATTATTATGGTCCAATTTA
TCTTGTTACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGATCCTTGTTTTGATGATTTTGATCCTCGCACCAACTTTTCCAAGTTCTTGGAAGAAGCAAAACATCATGCCAAAGAAGAGGATTTCAAGGCTGAGACACAAGA
AGAAACAGGAAGGAAATGGTTGGCACAACAGAAAAAGAGCAAGAAATCATGGAAAAACACACTCTTCTCCTGGTTGAATGGTGACAAAACGAGCAAATCTTTTCCCAAAC
TAGACAGAATTTCTCACACATCCAATAAAAGACACGTTCATGTTTCGGGTCCGATTTACACTGGAGCTACGACCATCGATGGCAGACCCCGACACCGTCCGACGTCTGGA
CCAATTGCGAGTCTCTTCAATCCAAGTATGCGAACGGAGATGGAGATCCCTTATATGTGTCTCCACCAGCTCACTAGCCCCATTCCTAATCATTATTATGGTCCAATTTA
TCTTGTTACATAGTCCTACATTGTCTCAACTCATCTTGGAGCCAGTGCAGCTTTGAAATGTTCTGTCTTGCTTTGTTTTGTATGTGTGATGAATATTATGAATATTATGA
GCCAAGTATGATTCTTGGCCCTCTTCGAAGTTTGGTGATCATGGTTACAACTTACAACTCCAC
Protein sequenceShow/hide protein sequence
MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKAETQEETGRKWLAQQKKSKKSWKNTLFSWLNGDKTSKSFPKLDRISHTSNKRHVHVSGPIYTGATTIDGRPRHRPTSG
PIASLFNPSMRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT