; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh01G001950 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G001950
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr01:890771..891863
RNA-Seq ExpressionCmaCh01G001950
SyntenyCmaCh01G001950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581619.1 hypothetical protein SDJN03_21621, partial [Cucurbita argyrosperma subsp. sororia]1.3e-0645.3Show/hide
Query:  MGAYACLLISLSLFFQLPNASSLPSN----SNHSINSLPLVTPPG---GGYSGGEQNLTVAGWVVLRARGGGRSVGAGGSIINRRPGRATNKNAASNSFV
        MG YACLLISL L FQ  + SSL +     SNHS NS PL         G   GE+N T    VVL+A+ GGRS  AG    N RPG+A  KNAA++ F 
Subjt:  MGAYACLLISLSLFFQLPNASSLPSN----SNHSINSLPLVTPPG---GGYSGGEQNLTVAGWVVLRARGGGRSVGAGGSIINRRPGRATNKNAASNSFV

Query:  SKLSLLLISSC--FYFF
          +   +++S   F FF
Subjt:  SKLSLLLISSC--FYFF
KAG6606846.1 hypothetical protein SDJN03_00188, partial [Cucurbita argyrosperma subsp. sororia]4.6e-4492.59Show/hide
Query:  MGAYACLLISLSLFFQLPNASSLPSNSNHSINSLPLVTPPGGGYSGGEQNLTVAGWVVLRARGGGRSVGAGGSIINRRPGRATNKNAASNSFVSKLSLLL
        MGAYACLLISL LFFQLPNAS LPSNSNHSINSLPLV PPGGG +GGEQNLTVAGWVVLRARGGGRSVGAGGSIINRRP RATNKNAASN FVSKLSLLL
Subjt:  MGAYACLLISLSLFFQLPNASSLPSNSNHSINSLPLVTPPGGGYSGGEQNLTVAGWVVLRARGGGRSVGAGGSIINRRPGRATNKNAASNSFVSKLSLLL

Query:  ISSCFYFF
        ISSCFY F
Subjt:  ISSCFYFF
KGN58897.2 hypothetical protein Csa_001334 [Cucumis sativus]8.6e-0640Show/hide
Query:  MGAYACLLISLSLFFQLPNASSLPSNSNHSINSLPLVTPP------------GGGYSGGEQNLTVAGWVVLRARGGGRSVGAGGSIINRRPGRATNKNAA
        MG YACLLISL L  Q    SSL + SN+S     L  PP            GGG            W V +A+GGGRS   G    N RPG+A  KNAA
Subjt:  MGAYACLLISLSLFFQLPNASSLPSNSNHSINSLPLVTPP------------GGGYSGGEQNLTVAGWVVLRARGGGRSVGAGGSIINRRPGRATNKNAA

Query:  -----SNSFVSKLSLLLISSCFYFF
             SN+ +  ++ LL+SS  Y F
Subjt:  -----SNSFVSKLSLLLISSCFYFF
TrEMBL top hitse value%identityAlignment
A0A0A0LCI5 Uncharacterized protein5.4e-0641.73Show/hide
Query:  MGAYACLLISLSLFFQLPNASSLPSNSNHSINSLPLVTPP-------------GGGYSGGEQNLTVA-GWVVLRARGGGRSVGAGGSIINRRPGRATNKN
        MG YACLLISL L  Q    SSL + SN+S     L  PP              GG    E N T A  W V +A+GGGRS   G    N RPG+A  KN
Subjt:  MGAYACLLISLSLFFQLPNASSLPSNSNHSINSLPLVTPP-------------GGGYSGGEQNLTVA-GWVVLRARGGGRSVGAGGSIINRRPGRATNKN

Query:  AA-----SNSFVSKLSLLLISSCFYFF
        AA     SN+ +  ++ LL+SS  Y F
Subjt:  AA-----SNSFVSKLSLLLISSCFYFF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCCCATTTGCTCCACTCGGGAAGTATTGGGGTTTGAGAATGACCAAAATGGCGAATGTGGGCGGCGCCCAATTGAATGGAGAGTTGTGTGTGTGTGGG
CGTGCGTCGACCAATGGATCGATGGTTGGGGGGAAATCCATAACGCCATACTACAACTCAGAAAAGCATTGGGAAGAATATAATAACAATATGAACAGAATATTG
GTGTGCTCTCTTTTATATGCTGCTTACGGCTATCCTTCAGCGAAGAAAAAGATGGGAGCATACGCCTGCCTCCTCATCTCCCTCTCATTGTTCTTTCAACTTCCC
AATGCTTCTTCTCTACCTTCCAATTCCAATCACTCAATCAACTCTCTTCCTCTTGTGACCCCTCCGGGTGGCGGCTACAGCGGCGGGGAACAGAATTTGACGGTG
GCGGGATGGGTGGTTTTACGGGCTAGAGGAGGGGGAAGGTCCGTCGGCGCGGGCGGCTCCATCATCAACCGCCGCCCGGGGAGGGCCACGAACAAGAACGCAGCT
TCCAATTCGTTTGTGTCTAAGCTTAGTTTGCTGCTCATCTCTTCCTGTTTCTACTTCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCCCATTTGCTCCACTCGGGAAGTATTGGGGTTTGAGAATGACCAAAATGGCGAATGTGGGCGGCGCCCAATTGAATGGAGAGTTGTGTGTGTGTGGG
CGTGCGTCGACCAATGGATCGATGGTTGGGGGGAAATCCATAACGCCATACTACAACTCAGAAAAGCATTGGGAAGAATATAATAACAATATGAACAGAATATTG
GTGTGCTCTCTTTTATATGCTGCTTACGGCTATCCTTCAGCGAAGAAAAAGATGGGAGCATACGCCTGCCTCCTCATCTCCCTCTCATTGTTCTTTCAACTTCCC
AATGCTTCTTCTCTACCTTCCAATTCCAATCACTCAATCAACTCTCTTCCTCTTGTGACCCCTCCGGGTGGCGGCTACAGCGGCGGGGAACAGAATTTGACGGTG
GCGGGATGGGTGGTTTTACGGGCTAGAGGAGGGGGAAGGTCCGTCGGCGCGGGCGGCTCCATCATCAACCGCCGCCCGGGGAGGGCCACGAACAAGAACGCAGCT
TCCAATTCGTTTGTGTCTAAGCTTAGTTTGCTGCTCATCTCTTCCTGTTTCTACTTCTTTTGA
Protein sequenceShow/hide protein sequence
MASPFAPLGKYWGLRMTKMANVGGAQLNGELCVCGRASTNGSMVGGKSITPYYNSEKHWEEYNNNMNRILVCSLLYAAYGYPSAKKKMGAYACLLISLSLFFQLP
NASSLPSNSNHSINSLPLVTPPGGGYSGGEQNLTVAGWVVLRARGGGRSVGAGGSIINRRPGRATNKNAASNSFVSKLSLLLISSCFYFF