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CmaCh01G004080 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G004080
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionNon-specific lipid-transfer protein 2-like
Genome locationCma_Chr01:2063530..2065668
RNA-Seq ExpressionCmaCh01G004080
SyntenyCmaCh01G004080
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064158.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]1.7e-1960.92Show/hide
Query:  GLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI
        GLC+LV VA+   LTG RLGEA +CNP +LS CV+AITSS APT  CC KL++QE CYCGYL+DPK K Y  SPRV+   ++   PI
Subjt:  GLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI

KAG6581741.1 hypothetical protein SDJN03_21743, partial [Cucurbita argyrosperma subsp. sororia]7.2e-1857.83Show/hide
Query:  MKKTGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAA-PTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKV
        +  +GLC+LV   +VA+LTGA +GEAV+CNP +LS C++AITS+ A PT  CC KLK+Q+ C+CGYL+DP+ KPYV SPR ++
Subjt:  MKKTGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAA-PTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKV

KAG6607060.1 hypothetical protein SDJN03_00402, partial [Cucurbita argyrosperma subsp. sororia]6.7e-2478.31Show/hide
Query:  MKKTGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGY-----LRDPKLKPYVTSP
        MKKTGLC+LVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSS APTPTCCAKLKEQ+SCY        +  P   PYVT P
Subjt:  MKKTGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGY-----LRDPKLKPYVTSP

KGN53813.1 hypothetical protein Csa_015036 [Cucumis sativus]2.2e-1960.23Show/hide
Query:  TGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI
        TGLC+LV VA+   L+  RLGEAV+CNP +LS CV+AITSS APT  CC KL++QE CYCGYL+DPK K Y  SPRV+   ++   PI
Subjt:  TGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI

XP_038904866.1 non-specific lipid-transfer protein 2-like [Benincasa hispida]1.0e-1661.64Show/hide
Query:  LVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVK
        L+ VAM A+LTGARL EAVTC+ M+LS C+ A TS+A P+  CC+KLKEQ+ C+CGY+++PKL  YV SPR K
Subjt:  LVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVK

TrEMBL top hitse value%identityAlignment
A0A0A0KW80 AAI domain-containing protein1.1e-1960.23Show/hide
Query:  TGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI
        TGLC+LV VA+   L+  RLGEAV+CNP +LS CV+AITSS APT  CC KL++QE CYCGYL+DPK K Y  SPRV+   ++   PI
Subjt:  TGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI

A0A1S3B931 non-specific lipid-transfer protein 2-like1.5e-1654.22Show/hide
Query:  LVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI
        L+ VA+VA+LTGAR+ EAVTCN M LS C+ AITS+A P+ TCC+KL+EQ+ C+CGY+++P L  YV S R K  ++    P+
Subjt:  LVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI

A0A5A7VAB3 Non-specific lipid-transfer protein 2-like1.5e-1654.22Show/hide
Query:  LVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI
        L+ VA+VA+LTGAR+ EAVTCN M LS C+ AITS+A P+ TCC+KL+EQ+ C+CGY+++P L  YV S R K  ++    P+
Subjt:  LVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI

A0A5D3BT00 Non-specific lipid-transfer protein 2-like8.3e-2060.92Show/hide
Query:  GLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI
        GLC+LV VA+   LTG RLGEA +CNP +LS CV+AITSS APT  CC KL++QE CYCGYL+DPK K Y  SPRV+   ++   PI
Subjt:  GLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI

A0A6J1CQB8 non-specific lipid-transfer protein 2-like7.3e-1658.97Show/hide
Query:  TGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVK
        TGL +LV VA++A+LTGA + EAVTC+P+ LSSC  AI+SS  P+ +CC+KL+EQ  C CGYL++P L+PYV SP  K
Subjt:  TGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVK

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 21.8e-0840.24Show/hide
Query:  MKKTGLCVLVAVAMVAVLTGARLGEA-VTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVK
        M++  + VL AVAMVA   G  +G A  +CN   L+ C  AI   A PT  CC+ L+ Q+ C+C + +DP+   YV SP  +
Subjt:  MKKTGLCVLVAVAMVAVLTGARLGEA-VTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVK

P20145 Probable non-specific lipid-transfer protein3.7e-0932.97Show/hide
Query:  MKKTGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI
        M+K     ++ V +V +  GA  G    C P  L+ C +AI     P+  CC  L+ Q+ C C Y++DP    YV+SP  +  LN    P+
Subjt:  MKKTGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI

P82353 Non-specific lipid-transfer protein 23.4e-1044.62Show/hide
Query:  VTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI
        VTC+P+ LS C+  I S A    TCC KL+EQ  C CGYL++P L+ YV SP  +   +    P+
Subjt:  VTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPI

P86809 Non-specific lipid-transfer protein 25.2e-1158.82Show/hide
Query:  TCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSP
        TC+ + LS C+AAIT +  P+  CC KLKEQ+ C CGYL+DP LK YV SP
Subjt:  TCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSP

Q43681 Probable non-specific lipid-transfer protein AKCS92.0e-1551.85Show/hide
Query:  MKKTGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVK
        MK + +C +V VA+  +  G  + EAVTCNP +LSSCV AIT  + P+ TCC+KLK QE C C Y+++P LK YV SP  K
Subjt:  MKKTGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVK

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.1e-1545.12Show/hide
Query:  LVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSP
        ++A+A   +L    + E VTC+PM L+SC AA+TSS+ P+  CC KL+EQ+ C CGY+R+P L+ YV+SP  +   N    P
Subjt:  LVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSP

AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.0e-0942.03Show/hide
Query:  AMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVK
        A+ A  TG      VTC+   L  C+AAIT    P+  CCAKL EQ+SC CG+ ++P    Y++SP  +
Subjt:  AMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVK

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.8e-0935.53Show/hide
Query:  CVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKV
        C ++ + +VA     R+     CNP  LS C+  I   + P+  CC+K+KEQ+ C C YL++P  K ++ SP  K+
Subjt:  CVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKV

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.2e-1650.62Show/hide
Query:  MKKTGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVK
        M KT +  L A+A V ++  A   EAVTC+PM LS C  AITSS+ P+  CCAKLKEQ  C CGY+R+P L+ +V++P  +
Subjt:  MKKTGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVK

AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.2e-1049.09Show/hide
Query:  VTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVK
        VTC+   LSSCV A+++ A P+  CC KLKE E+C C Y+++P    YVTSP  +
Subjt:  VTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAACAGGTCTTTGCGTTCTGGTGGCAGTGGCGATGGTGGCAGTTCTCACCGGAGCTCGTCTCGGGGAAGCAGTGACTTGCAACCCCATGGATCTGAGC
TCATGTGTCGCTGCAATCACGTCGTCAGCGGCGCCTACACCGACTTGCTGTGCGAAGTTGAAGGAACAAGAGTCATGCTATTGTGGGTACCTAAGAGATCCAAAG
TTGAAACCTTACGTGACATCTCCTCGCGTCAAAGTGGGTTTAAATCGTCTCAATTCCCCAATTTATTTTGAACCCGGAATTTCTATTTCTTCTTCTTCTTCTTCC
TCCTCAATCGGTACTCTTTCTTCCCAAAATTTCTTTTGCTGCCTAGTTTTTGCACCAAATCTCATTGACGCCGGCCACCGGCCACCGGCGGTACAGTCTCCCCCG
ACCATATATCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAACAGGTCTTTGCGTTCTGGTGGCAGTGGCGATGGTGGCAGTTCTCACCGGAGCTCGTCTCGGGGAAGCAGTGACTTGCAACCCCATGGATCTGAGC
TCATGTGTCGCTGCAATCACGTCGTCAGCGGCGCCTACACCGACTTGCTGTGCGAAGTTGAAGGAACAAGAGTCATGCTATTGTGGGTACCTAAGAGATCCAAAG
TTGAAACCTTACGTGACATCTCCTCGCGTCAAAGTGGGTTTAAATCGTCTCAATTCCCCAATTTATTTTGAACCCGGAATTTCTATTTCTTCTTCTTCTTCTTCC
TCCTCAATCGGTACTCTTTCTTCCCAAAATTTCTTTTGCTGCCTAGTTTTTGCACCAAATCTCATTGACGCCGGCCACCGGCCACCGGCGGTACAGTCTCCCCCG
ACCATATATCTTTAG
Protein sequenceShow/hide protein sequence
MKKTGLCVLVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSAAPTPTCCAKLKEQESCYCGYLRDPKLKPYVTSPRVKVGLNRLNSPIYFEPGISISSSSSS
SSIGTLSSQNFFCCLVFAPNLIDAGHRPPAVQSPPTIYL