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CmaCh01G005990 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G005990
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionEpsin-2
Genome locationCma_Chr01:3146139..3149767
RNA-Seq ExpressionCmaCh01G005990
SyntenyCmaCh01G005990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RDY09514.1 Epsin-2, partial [Mucuna pruriens]3.1e-0534.46Show/hide
Query:  STNLVATVSGHSPADESKTSSNCPDDNAFRTSLASPTAGFP--AWKSVKNRGHL---------------RFQRLFVFGFSMSM-ESYPLKKGGFGDFRSA
        STN VA V  HSPA+ESK   N P + A RTS A+PT   P  + K +  + ++               +F++  V G+S S  E         GDF  A
Subjt:  STNLVATVSGHSPADESKTSSNCPDDNAFRTSLASPTAGFP--AWKSVKNRGHL---------------RFQRLFVFGFSMSM-ESYPLKKGGFGDFRSA

Query:  STRILVTRLRYTHRATSPDEDV-IWQQFFPSSPPCTYSHSPPDQSESS
        S RI VTRL+  H+A S DE    +Q+  P      +S       +SS
Subjt:  STRILVTRLRYTHRATSPDEDV-IWQQFFPSSPPCTYSHSPPDQSESS
TrEMBL top hitse value%identityAlignment
A0A371I3H2 Epsin-2 (Fragment)1.5e-0534.46Show/hide
Query:  STNLVATVSGHSPADESKTSSNCPDDNAFRTSLASPTAGFP--AWKSVKNRGHL---------------RFQRLFVFGFSMSM-ESYPLKKGGFGDFRSA
        STN VA V  HSPA+ESK   N P + A RTS A+PT   P  + K +  + ++               +F++  V G+S S  E         GDF  A
Subjt:  STNLVATVSGHSPADESKTSSNCPDDNAFRTSLASPTAGFP--AWKSVKNRGHL---------------RFQRLFVFGFSMSM-ESYPLKKGGFGDFRSA

Query:  STRILVTRLRYTHRATSPDEDV-IWQQFFPSSPPCTYSHSPPDQSESS
        S RI VTRL+  H+A S DE    +Q+  P      +S       +SS
Subjt:  STRILVTRLRYTHRATSPDEDV-IWQQFFPSSPPCTYSHSPPDQSESS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGTTTGTACTTGCAAGTTATGATTTACAAAGCCAGTTATGAATTGCAAGCCGCAGAGTGTGGTTTGGAGTTACCTGCAAATGATTCAATCTCAAATTGGTCATT
GGTGAAGTTTCACGACCATTTTTCAGCCACGAGTGAATCGCTTCGCCTTCGTATAGCAAAGTCTACCAATCTCGTAGCAACAGTTTCTGGCCATTCTCCAGCAGATGAAT
CCAAAACCAGTTCTAATTGTCCAGACGATAATGCGTTTCGCACTTCACTAGCTAGTCCGACCGCTGGTTTTCCAGCTTGGAAGAGTGTAAAAAACAGAGGGCACTTGAGA
TTTCAGCGACTATTCGTGTTCGGATTCTCCATGTCAATGGAGTCTTACCCTTTGAAAAAAGGTGGTTTTGGAGACTTCCGTTCGGCAAGTACTCGAATATTAGTGACCAG
GCTTCGGTACACACACCGAGCAACATCACCAGATGAGGATGTCATATGGCAACAGTTCTTCCCATCATCTCCCCCTTGTACATACAGTCATAGCCCGCCTGACCAATCTG
AAAGCTCTCGGAGAAATTACACGTTGCGGTCTGTATCTCAGACAATGAAAATTCATCCAGCTGAGGCAATTCTTCAACAAATCCAATCAAGCTTCTACAATTTGCAGACT
GAGCTTGTCCACTTTTCCGCCGCTCAAGCCAATGCAAGGCTTTCGCCTTCTGTTAGCCAGCAATTCCAAATTTTTAGTGGCCTCCTCAGAGGACGAACCCCTTTCATGAA
AGCGACGAAGAGTCCACTGAAGCACACTCGTAGCTCCCCCCACAGACTTCCCGACAGCCACAAAAATCTCATCATCGCCGGCGACGGCGCCGCCATCTTCGATGGCATCA
TCTACTGCCGACATCATATCAGACCCATAATCGAAATTGGGTCAGCAGAAAAGCTAGAAAACAGGGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGTTTGTACTTGCAAGTTATGATTTACAAAGCCAGTTATGAATTGCAAGCCGCAGAGTGTGGTTTGGAGTTACCTGCAAATGATTCAATCTCAAATTGGTCATT
GGTGAAGTTTCACGACCATTTTTCAGCCACGAGTGAATCGCTTCGCCTTCGTATAGCAAAGTCTACCAATCTCGTAGCAACAGTTTCTGGCCATTCTCCAGCAGATGAAT
CCAAAACCAGTTCTAATTGTCCAGACGATAATGCGTTTCGCACTTCACTAGCTAGTCCGACCGCTGGTTTTCCAGCTTGGAAGAGTGTAAAAAACAGAGGGCACTTGAGA
TTTCAGCGACTATTCGTGTTCGGATTCTCCATGTCAATGGAGTCTTACCCTTTGAAAAAAGGTGGTTTTGGAGACTTCCGTTCGGCAAGTACTCGAATATTAGTGACCAG
GCTTCGGTACACACACCGAGCAACATCACCAGATGAGGATGTCATATGGCAACAGTTCTTCCCATCATCTCCCCCTTGTACATACAGTCATAGCCCGCCTGACCAATCTG
AAAGCTCTCGGAGAAATTACACGTTGCGGTCTGTATCTCAGACAATGAAAATTCATCCAGCTGAGGCAATTCTTCAACAAATCCAATCAAGCTTCTACAATTTGCAGACT
GAGCTTGTCCACTTTTCCGCCGCTCAAGCCAATGCAAGGCTTTCGCCTTCTGTTAGCCAGCAATTCCAAATTTTTAGTGGCCTCCTCAGAGGACGAACCCCTTTCATGAA
AGCGACGAAGAGTCCACTGAAGCACACTCGTAGCTCCCCCCACAGACTTCCCGACAGCCACAAAAATCTCATCATCGCCGGCGACGGCGCCGCCATCTTCGATGGCATCA
TCTACTGCCGACATCATATCAGACCCATAATCGAAATTGGGTCAGCAGAAAAGCTAGAAAACAGGGCATGA
Protein sequenceShow/hide protein sequence
MESLYLQVMIYKASYELQAAECGLELPANDSISNWSLVKFHDHFSATSESLRLRIAKSTNLVATVSGHSPADESKTSSNCPDDNAFRTSLASPTAGFPAWKSVKNRGHLR
FQRLFVFGFSMSMESYPLKKGGFGDFRSASTRILVTRLRYTHRATSPDEDVIWQQFFPSSPPCTYSHSPPDQSESSRRNYTLRSVSQTMKIHPAEAILQQIQSSFYNLQT
ELVHFSAAQANARLSPSVSQQFQIFSGLLRGRTPFMKATKSPLKHTRSSPHRLPDSHKNLIIAGDGAAIFDGIIYCRHHIRPIIEIGSAEKLENRA