CuGenDBv2

Gene ID	CmaCh01G006120
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Rab5-interacting
Genome location	Cma_Chr01:3190762..3194617
RNA-Seq Expression	CmaCh01G006120
Synteny	CmaCh01G006120
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004145291.1 uncharacterized protein RAB5IF homolog [Cucumis sativus]

9.3e-62

92.91

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGG+WFI+FLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

1.0e-63

92.91

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFI+FLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFAS+TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]

4.8e-66

99.21

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFI+FLVISTTMVYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

2.1e-66

100

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]

4.5e-64

95.28

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKS KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFI+FLVISTTMVYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY22 Uncharacterized protein

4.5e-62

92.91

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGG+WFI+FLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

A0A1S3C692 uncharacterized protein C20orf24 homolog

4.8e-64

92.91

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFI+FLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFAS+TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

A0A5A7VQ84 Rab5-interacting

4.4e-57

87.4

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFI+FLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFAS+TLFLL   L   L  F
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

A0A6J1G9S8 uncharacterized protein C20orf24 homolog

2.3e-66

99.21

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFI+FLVISTTMVYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

A0A6J1KGG2 uncharacterized protein C20orf24 homolog

1.0e-66

100

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

8.9e-15

34.65

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASW-DKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGH
        M  G+  +   Q Q  NG L     + +   +A+W DKD+  DV++W RQ +A+V G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASW-DKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLLMWTLVYSLGH
          L +EG   S  LF++     ++ GH
Subjt:  GVLLQEGLFASITLFLLMWTLVYSLGH

Q9CQT9 Respirasome Complex Assembly Factor 1

4.3e-17

35.94

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASW-DKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGH
        M  G+  +   Q Q  NG L     + +   +A+W DKD+  DV++W RQ +ALV G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLANLFDPEASW-DKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASITLFLLMWTLVYSLGHF
          L +EG   S  LF+++W + Y+  H+
Subjt:  GVLLQEGLFASITLFLLMWTLVYSLGHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

1.4e-47

66.17

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Query:  MKDGKSIKVNS------QLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEE
        MK+GKS K +S      Q+ HQN HL  F  A LFD EASWDKDQLGDVLHW+RQ V L+CGLLWG++PLVGGIW ++FL IS+ +VYGYYA++LK+DEE
Subjt:  MKDGKSIKVNS------QLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEE

Query:  EFGGHGVLLQEGLFASITLFLLMWTLVYSLGHF
        +FGGH  LLQ+GLFAS++LFLL W LVYSL  F
Subjt:  EFGGHGVLLQEGLFASITLFLLMWTLVYSLGHF

AT5G59410.1 Rab5-interacting family protein

3.5e-51

73.85

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Query:  MKDGKSIKVN---SQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFG
        MK+ KS K+N    Q  HQN HL P KLA LFDP+ASWDKDQLGDVLHW+RQ V L+ GLLWGS+PLVGGIW I+FL IS+ +VYGYYAMILKVDEE+FG
Subjt:  MKDGKSIKVN---SQLQHQNGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFG

Query:  GHGVLLQEGLFASITLFLLMWTLVYSLGHF
        GH  LLQEGLFAS+TLFLL W LVYSL HF
Subjt:  GHGVLLQEGLFASITLFLLMWTLVYSLGHF

Sequences

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CDS sequence

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mRNA sequence

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ATGGCGGTGTTTTGGGTTTTGGAAAGGCAAAATCAGGAATTAACGTCCAGAATTGAAGTCAAACAGAGGGAAAATAACCGGAAAGTGGCTGGCAGTGGCTGGCAG
TGGCTGCCCTCTCCTCTTTCAACTGGTTGGCTTGGCTGGCTCTCCAACGCCGTTCACGCCTCTTTAAGCACCCATCTTCTGATCTTTATCTCTAGATTTCAGTTC
ATACTCCACTGGTTATCTCGAATTTTCTCTCGATTTCTCGATTTCCGAACAGTCGGCATGAAGGACGGGAAGTCGATTAAGGTCAATTCTCAGTTGCAGCATCAG
AATGGTCACTTGCCGCCGTTCAAATTGGCCAATTTGTTCGATCCAGAGGCTTCATGGGATAAGGATCAACTGGGAGATGTCTTGCATTGGATGCGACAGTCGGTT
GCGCTTGTATGTGGGCTGCTTTGGGGTTCGGTGCCTCTGGTTGGAGGAATTTGGTTCATCGTATTCTTGGTGATATCAACCACAATGGTATATGGATACTATGCA
ATGATTTTAAAAGTAGACGAAGAAGAATTCGGGGGTCATGGAGTCCTCCTCCAGGAAGGGCTTTTTGCTTCCATAACTCTGTTTCTGCTTATGTGGACTCTCGTT
TACAGCTTGGGACACTTCTGACAATGGTTTTGTCATCGTTCTCGATATCGAGCCAAGCAATGGTAGGGATGTTATTGCCACTGTTGCTTGCTTTTTTTATTAGTG
ATTGTGCAATAGTTTGCCTTAGAAGGAAGTGTCCACGATGTAGAATTGGATTAATTTCATTAAAATTACAACTTACAAAATTTTAGTAGTTATTATTGATTCTGT
TAAACCCAATTCAATCTTCTTCAAAGAATAAATTGTTTAAACAAATGCAGTTGGTTCCTCTTTTTTCCCTTTATTCTCTGCTACATTAGGTTGACGTTTAAGAAT
ATGGTCGCCATTCAAATCAGTTTATAGATTTAGCTATTTTTTCGGGTCTGCTCTCCCATCCTAAGGCTTGAACATTTGAAGGTTCGTTGTTAAGCTCACGTAAAG
ATCGAACACACACACGACTTCTGGACAGGTGTTAGGGACAGTGCCTTAGGCAACAAGCTGTTCTTGAGGGTGTTTAGTAATTTGATTTTTCTCCTGTAGTTATTT
GAATGTAAATGATAACTTATTTTAGAATTGTAAGTTTCTTGGTTTACATATATTCTTCAGAAACAATTGTCAACATTAATATTTAATGATTTTAGAGAATATG

Protein sequence

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MAVFWVLERQNQELTSRIEVKQRENNRKVAGSGWQWLPSPLSTGWLGWLSNAVHASLSTHLLIFISRFQFILHWLSRIFSRFLDFRTVGMKDGKSIKVNSQLQHQ
NGHLPPFKLANLFDPEASWDKDQLGDVLHWMRQSVALVCGLLWGSVPLVGGIWFIVFLVISTTMVYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFLLMWTLV
YSLGHF

CmaCh01G006120 (gene) of Cucurbita maxima (Rimu) v1.1 genome