; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh01G008190 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G008190
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionLYR motif-containing protein 4
Genome locationCma_Chr01:4380083..4380349
RNA-Seq ExpressionCmaCh01G008190
SyntenyCmaCh01G008190
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607477.1 LYR motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3797.73Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDVNS
        MAAPSRSEILTLFRSLLRTARQFPDYNI+EYTKRRTIDAFRENQSLSDPSSISSV+AGGKAQLEVAKRQALVYSLYAPKVKSIMDVNS
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDVNS

KGN64034.1 hypothetical protein Csa_014098 [Cucumis sativus]2.4e-3287.36Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA PS SEIL+LFRSLLRTARQFPDYNI+EY KRRTID+FRENQ+LSD SSISSV+AGG+AQLEVAKRQA+VYSLYAPKVKSIMDVN
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN

XP_009623746.1 LYR motif-containing protein 4 [Nicotiana tomentosiformis]1.5e-2975.86Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA+PSR E+LTLFRSLL+TARQFPDYNI+EYTKRRTID FR+N+ LSDPS +++ F+ G+AQLEVAKRQA+VYSLYAPKVKS+M++N
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN

XP_022137452.1 LYR motif-containing protein 4 [Momordica charantia]1.1e-3290.7Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDV
        MA PSRSEIL+LFRSLLRTARQF DYNI+EYTKRR IDAFREN+SLSDPSSISS +AGGKAQLEVAKRQALVYSLYAPKVKSIMDV
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDV

XP_038894896.1 LYR motif-containing protein 4 [Benincasa hispida]2.0e-3491.95Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA PSRSE+L+LFRSLLRTARQFPDYNI+EYTKRRTIDAFRENQSLSD SSISS +AGGKAQLEVAKRQALVYSLYAPKVKSIMDVN
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN

TrEMBL top hitse value%identityAlignment
A0A0A0LST7 Uncharacterized protein1.2e-3287.36Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA PS SEIL+LFRSLLRTARQFPDYNI+EY KRRTID+FRENQ+LSD SSISSV+AGG+AQLEVAKRQA+VYSLYAPKVKSIMDVN
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN

A0A1J6JR59 Uncharacterized protein1.2e-2974.71Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA+PSR E+LTLFRSLL+TARQFPDYNI+EYTKRRTIDAF++N+ LSDPS +++ F+ G++QLEVAKRQA+VYSLYAPKVKS+M++N
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN

A0A1S3XFP4 LYR motif-containing protein 47.1e-3075.86Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA+PSR E+LTLFRSLL+TARQFPDYNI+EYTKRRTID FR+N+ LSDPS +++ F+ G+AQLEVAKRQA+VYSLYAPKVKS+M++N
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDVN

A0A251UU63 Putative complex 1 LYR protein7.1e-3079.07Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDV
        MA PSRSEILTLFRSLLR+ARQFPDYNI+EYTKRRTIDAFR N++LS+PSSI++ F+ G++QL+VAKRQA+VYSLYAPK+KSIMD+
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDV

A0A6J1C8A4 LYR motif-containing protein 45.2e-3390.7Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDV
        MA PSRSEIL+LFRSLLRTARQF DYNI+EYTKRR IDAFREN+SLSDPSSISS +AGGKAQLEVAKRQALVYSLYAPKVKSIMDV
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDV

SwissProt top hitse value%identityAlignment
B5FZA8 LYR motif-containing protein 45.4e-1144.16Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYA
        MAA SR+++L L+R+LLR +++F  YN + Y  RR  DAFREN++++D   I  +    KA LEV +RQ  +  +YA
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYA

B5XD90 LYR motif-containing protein 4B8.6e-0933.73Show/hide
Query:  APSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMD
        A   +++L+L+R L++ + +FP YN + Y  RR  DAFR N+S+ DP  +  +   G+  L++ +RQ  +  +Y P  K+I++
Subjt:  APSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMD

Q0VCG0 LYR motif-containing protein 43.9e-0938.96Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYA
        MAA SR+++L L+R++LR +++F  YN + Y  RR  DAFREN+++ DP  I ++    K  L + +RQ  +  +Y+
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYA

Q8K215 LYR motif-containing protein 46.0e-1040.26Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYA
        MAA SR+++L L+R+++R ++ F  YN + Y  RR  DAFREN+++ DP  I ++    K  LE+ +RQ  +  LY+
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYA

Q9HD34 LYR motif-containing protein 46.0e-1041.56Show/hide
Query:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYA
        MAA SR+++L+L+R++LR +++F  YN + Y  RR  DAFREN+++ DP  I ++    K  L V +RQ  +  LY+
Subjt:  MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYA

Arabidopsis top hitse value%identityAlignment
AT5G61220.1 LYR family of Fe/S cluster biogenesis protein1.7e-2057.32Show/hide
Query:  SRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDV
        S SE+L+L R+LLR  RQFPDYNI+EY+KRRT+D FR N++L+DPS ++  +A  K QL VA+R   VY  Y PK K+IM+V
Subjt:  SRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCCATCGAGGTCTGAAATCCTCACGCTCTTTCGTTCCCTTCTTCGCACGGCGCGTCAATTCCCCGATTACAATATCAAAGAATACACCAAACGCCGC
ACCATTGATGCCTTCCGAGAAAATCAAAGCCTCTCTGACCCTTCATCCATCTCCTCCGTATTCGCTGGCGGAAAAGCTCAGCTTGAGGTTGCGAAGCGGCAGGCC
CTTGTTTACTCTCTTTACGCGCCTAAGGTCAAGAGTATCATGGATGTCAACTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTCCATCGAGGTCTGAAATCCTCACGCTCTTTCGTTCCCTTCTTCGCACGGCGCGTCAATTCCCCGATTACAATATCAAAGAATACACCAAACGCCGC
ACCATTGATGCCTTCCGAGAAAATCAAAGCCTCTCTGACCCTTCATCCATCTCCTCCGTATTCGCTGGCGGAAAAGCTCAGCTTGAGGTTGCGAAGCGGCAGGCC
CTTGTTTACTCTCTTTACGCGCCTAAGGTCAAGAGTATCATGGATGTCAACTCCTGA
Protein sequenceShow/hide protein sequence
MAAPSRSEILTLFRSLLRTARQFPDYNIKEYTKRRTIDAFRENQSLSDPSSISSVFAGGKAQLEVAKRQALVYSLYAPKVKSIMDVNS