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CmaCh01G008440 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G008440
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 6, chloroplastic
Genome locationCma_Chr01:4645296..4645671
RNA-Seq ExpressionCmaCh01G008440
SyntenyCmaCh01G008440
Gene Ontology termsNA
InterPro domainsIPR042106 - NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ


Homology Show/hide homology
GenBank top hitse value%identityAlignment
VVW89706.1 unnamed protein product, partial [Nymphaea colorata]6.7e-0775.56Show/hide
Query:  MIWDYLDYKIKPDSR-ALISNSQQIGIDLSTSVFLPFELISIILL
        M+ DYLDYKIKPD R  L SN QQIGI LST  +LPFELISIILL
Subjt:  MIWDYLDYKIKPDSR-ALISNSQQIGIDLSTSVFLPFELISIILL
TrEMBL top hitse value%identityAlignment
A0A5K1HP91 Uncharacterized protein (Fragment)3.2e-0775.56Show/hide
Query:  MIWDYLDYKIKPDSR-ALISNSQQIGIDLSTSVFLPFELISIILL
        M+ DYLDYKIKPD R  L SN QQIGI LST  +LPFELISIILL
Subjt:  MIWDYLDYKIKPDSR-ALISNSQQIGIDLSTSVFLPFELISIILL
SwissProt top hitse value%identityAlignment
A4QJG9 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic1.7e-0586.67Show/hide
Query:  LISNSQQIGIDLSTSVFLPFELISIILLAA
        LISNSQQIGI LST  FLPFELISIILL A
Subjt:  LISNSQQIGIDLSTSVFLPFELISIILLAA
A4QJQ3 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic1.7e-0586.67Show/hide
Query:  LISNSQQIGIDLSTSVFLPFELISIILLAA
        LISNSQQIGI LST  FLPFELISIILL A
Subjt:  LISNSQQIGIDLSTSVFLPFELISIILLAA
A4QKG0 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic1.7e-0586.67Show/hide
Query:  LISNSQQIGIDLSTSVFLPFELISIILLAA
        LISNSQQIGI LST  FLPFELISIILL A
Subjt:  LISNSQQIGIDLSTSVFLPFELISIILLAA
A4QKP8 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic1.7e-0586.67Show/hide
Query:  LISNSQQIGIDLSTSVFLPFELISIILLAA
        LISNSQQIGI LST  FLPFELISIILL A
Subjt:  LISNSQQIGIDLSTSVFLPFELISIILLAA
Q95695 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic1.7e-0586.67Show/hide
Query:  LISNSQQIGIDLSTSVFLPFELISIILLAA
        LISNSQQIGI LST  FLPFELISIILL A
Subjt:  LISNSQQIGIDLSTSVFLPFELISIILLAA
Arabidopsis top hitse value%identityAlignment
ATCG01080.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 61.2e-0686.67Show/hide
Query:  LISNSQQIGIDLSTSVFLPFELISIILLAA
        LISNSQQIGI LST  FLPFELISIILL A
Subjt:  LISNSQQIGIDLSTSVFLPFELISIILLAA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATGGGATTATTTGGACTACAAGATCAAACCTGATTCTAGAGCCTTAATAAGTAATAGTCAACAAATTGGAATTGATTTATCAACATCTGTTTTTCTTCCA
TTTGAACTAATTTCGATCATTCTTTTAGCTGCTTTCTTTGATCGGCGCAATTGCCGTGGCTCGCCAAAT
mRNA sequenceShow/hide mRNA sequence
ATACGTAATGATATGGGATTATTTGGACTACAAGATCAAACCTGATTCTAGAGCCTTAATAAGTAATAGTCAACAAATTGGAATTGATTTATCAACATCTGTTTT
TCTTCCATTTGAACTAATTTCGATCATTCTTTTAGCTGCTTTCTTTGATCGGCGCAATTGCCGTGGCTCGCCAAAT
Protein sequenceShow/hide protein sequence
MIWDYLDYKIKPDSRALISNSQQIGIDLSTSVFLPFELISIILLAAFFDRRNCRGSPN