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CmaCh01G008960 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G008960
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRibulose bisphosphate carboxylase large chain
Genome locationCma_Chr01:5205900..5206156
RNA-Seq ExpressionCmaCh01G008960
SyntenyCmaCh01G008960
Gene Ontology termsGO:0009853 - photorespiration (biological process)
GO:0019253 - reductive pentose-phosphate cycle (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0004497 - monooxygenase activity (molecular function)
GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domainsIPR000685 - Ribulose bisphosphate carboxylase, large subunit, C-terminal
IPR036376 - Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAN34923.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Sisyrinchium montanum]1.2e-1678.33Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M    R LFC+EAIYKSQA+TGEIKG YLNATA TCEEMMK AIFARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

AEX01679.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Posidonia australis]1.2e-1678.33Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M    R LFC+EAIYKSQA+TGEIKG YLNATA TCEEMMK AIFARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

BAM37543.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Sisyrinchium rosulatum]1.2e-1678.33Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M    R LFC+EAIYKSQA+TGEIKG YLNATA TCEEMMK AIFARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

CAC51395.1 ribulose bisphosphate carboxylase, partial [Plantago atrata]4.1e-1778.33Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M +  R LFC+EAIYKSQA+TGEIKG YLNATA TCEEMMK AIFARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

PHT40417.1 Ribulose bisphosphate carboxylase large chain [Capsicum baccatum]3.2e-1759.77Show/hide
Query:  MVEQFMNVYVVDLILPK------------MMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        +V+ F+NV+ VDLILPK            M    R LFC+EA++K+Q +TGEIKG YLNATA TCEEMMK AIFARE GV I MHDY
Subjt:  MVEQFMNVYVVDLILPK------------MMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

TrEMBL top hitse value%identityAlignment
A0A2G2W5B6 Ribulose bisphosphate carboxylase large chain1.5e-1759.77Show/hide
Query:  MVEQFMNVYVVDLILPK------------MMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        +V+ F+NV+ VDLILPK            M    R LFC+EA++K+Q +TGEIKG YLNATA TCEEMMK AIFARE GV I MHDY
Subjt:  MVEQFMNVYVVDLILPK------------MMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

H6THF8 Ribulose bisphosphate carboxylase large chain (Fragment)5.8e-1778.33Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M    R LFC+EAIYKSQA+TGEIKG YLNATA TCEEMMK AIFARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

J7M6P5 Ribulose bisphosphate carboxylase large chain (Fragment)5.8e-1778.33Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M    R LFC+EAIYKSQA+TGEIKG YLNATA TCEEMMK AIFARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

O47253 Ribulose bisphosphate carboxylase large chain (Fragment)5.8e-1778.33Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M    R LFC+EAIYKSQA+TGEIKG YLNATA TCEEMMK AIFARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

Q95A57 Ribulose bisphosphate carboxylase large chain (Fragment)2.0e-1778.33Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M +  R LFC+EAIYKSQA+TGEIKG YLNATA TCEEMMK AIFARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

SwissProt top hitse value%identityAlignment
B0Z4K9 Ribulose bisphosphate carboxylase large chain2.1e-1978.33Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M    R LFC+EAIYKSQA+TGEIKG YLNATA TCEEMMK AIFARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

P28260 Ribulose bisphosphate carboxylase large chain2.1e-1978.33Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M    R LFC+EAIYKSQA+TGEIKG YLNATA TCEEMMK AIFARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

P28395 Ribulose bisphosphate carboxylase large chain (Fragment)2.1e-1978.33Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M    R LFC+EAIYKSQA+TGEIKG YLNATA TCEEMMK AIFARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

P28433 Ribulose bisphosphate carboxylase large chain (Fragment)2.1e-1978.33Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M    R LFC+EAIYKSQA+TGEIKG YLNATA TCEEMMK AIFARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

P48686 Ribulose bisphosphate carboxylase large chain2.1e-1978.33Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M    R LFC+EAIYKSQA+TGEIKG YLNATA TCEEMMK AIFARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

Arabidopsis top hitse value%identityAlignment
AT2G07732.1 Ribulose bisphosphate carboxylase large chain, catalytic domain4.0e-1868.33Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M    R LFC+EA+YK+QA+TG IKG YLNAT  TCEEM+K A+FARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

ATCG00490.1 ribulose-bisphosphate carboxylases5.6e-2075Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M    R LFC+EAIYKSQA+TGEIKG YLNATA TCEEM+K A+FARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY

ATMG00280.1 Ribulose bisphosphate carboxylase large chain, catalytic domain1.1e-1870Show/hide
Query:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY
        P M    R LFC+EA+YK+QA+TG IKG YLNATA TCEEM+K A+FARE GVPI MHDY
Subjt:  PKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGCAGTTTATGAATGTCTACGTGGTGGACTTGATTTTACCAAAGATGATGAAAACAGCTCGTTCTCTATTTTGTTCAGAAGCCATTTATAAATCACAG
GCTGACACAGGTGAAATCAAGGGACAATACTTGAATGCTACTGCGGAGACATGCGAAGAAATGATGAAAATTGCTATATTTGCTCGAGAATTTGGAGTTCCTATC
GCAATGCATGACTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGCAGTTTATGAATGTCTACGTGGTGGACTTGATTTTACCAAAGATGATGAAAACAGCTCGTTCTCTATTTTGTTCAGAAGCCATTTATAAATCACAG
GCTGACACAGGTGAAATCAAGGGACAATACTTGAATGCTACTGCGGAGACATGCGAAGAAATGATGAAAATTGCTATATTTGCTCGAGAATTTGGAGTTCCTATC
GCAATGCATGACTACTAA
Protein sequenceShow/hide protein sequence
MVEQFMNVYVVDLILPKMMKTARSLFCSEAIYKSQADTGEIKGQYLNATAETCEEMMKIAIFAREFGVPIAMHDY