; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh01G009030 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G009030
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionDNA-directed RNA polymerase subunit beta''
Genome locationCma_Chr01:5369576..5370163
RNA-Seq ExpressionCmaCh01G009030
SyntenyCmaCh01G009030
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR007081 - RNA polymerase Rpb1, domain 5
IPR007083 - RNA polymerase Rpb1, domain 4
IPR038120 - RNA polymerase Rpb1, funnel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALO21718.1 RpoC2 [Cucurbita argyrosperma]5.0e-8889.01Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q SLILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK+   + F
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF

ALO22384.1 RpoC2 [Cucurbita moschata]5.0e-8889.01Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q SLILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK+   + F
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF

ALO22570.1 RpoC2 [Cucurbita pepo subsp. fraterna]5.0e-8889.01Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q SLILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK+   + F
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF

YP_009447525.1 RNA polymerase beta'' subunit [Cucurbita moschata]5.0e-8889.01Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q SLILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK+   + F
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF

YP_009505070.1 RNA polymerase beta'' subunit [Cucurbita pepo]5.0e-8889.01Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q SLILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK+   + F
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF

TrEMBL top hitse value%identityAlignment
A0A0S2IDT9 DNA-directed RNA polymerase2.4e-8889.01Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q SLILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK+   + F
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF

A0A0S2IDY7 DNA-directed RNA polymerase2.4e-8889.01Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q SLILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK+   + F
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF

A0A0S2IFZ6 DNA-directed RNA polymerase2.4e-8889.01Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q SLILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK+   + F
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF

A0A0S2IHI7 DNA-directed RNA polymerase2.4e-8889.01Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q SLILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK+   + F
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF

A0A2H4T1Y3 DNA-directed RNA polymerase subunit beta''2.4e-8889.01Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q SLILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK+   + F
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNF

SwissProt top hitse value%identityAlignment
A4QJA5 DNA-directed RNA polymerase subunit beta''9.5e-9090.76Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q SLILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVH+MSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP NK
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK

A4QJI9 DNA-directed RNA polymerase subunit beta''9.5e-9090.76Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q SLILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVH+MSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP NK
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK

A4QK08 DNA-directed RNA polymerase subunit beta''9.5e-9090.76Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q SLILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVH+MSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP NK
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK

A4QL09 DNA-directed RNA polymerase subunit beta''9.5e-9090.76Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q SLILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVH+MSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP NK
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK

A4QL96 DNA-directed RNA polymerase subunit beta''9.5e-9090.76Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q SLILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVH+MSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP NK
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK

Arabidopsis top hitse value%identityAlignment
AT3G57660.1 nuclear RNA polymerase A13.3e-0531.09Show/hide
Query:  NPVHIMSFSGARG---NASQVHQLVGMRGLMSDPQGQMID---LP--------------IQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRR
        N + +M+ SGA+G   N  Q+   +G + L      +M+    LP              I      GL   +Y   C   R+G+VDTAV+TS +GYL R 
Subjt:  NPVHIMSFSGARG---NASQVHQLVGMRGLMSDPQGQMID---LP--------------IQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRR

Query:  LVEVVQHIVVRRTDCGTIR
        L++ ++ + V   DC T+R
Subjt:  LVEVVQHIVVRRTDCGTIR

AT4G35800.1 RNA polymerase II large subunit3.9e-0636.67Show/hide
Query:  IQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIR
        ++++   GL+  ++     G R+G++DTAV+TS+ GY+ RRLV+ ++ I+V+    GT+R
Subjt:  IQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIR

AT5G60040.1 nuclear RNA polymerase C11.9e-0533.33Show/hide
Query:  IQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGIS
        + ++   GL+ T++     G R+G+VDTAV+T+  GY++RRL++ ++ ++V   +  T+R  S
Subjt:  IQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGIS

AT5G60040.2 nuclear RNA polymerase C11.9e-0533.33Show/hide
Query:  IQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGIS
        + ++   GL+ T++     G R+G+VDTAV+T+  GY++RRL++ ++ ++V   +  T+R  S
Subjt:  IQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGIS

ATCG00170.1 DNA-directed RNA polymerase family protein3.3e-9090.22Show/hide
Query:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM
        AT TSISLGIDDLLTIPSKGWLVQDA+Q S ILEKHH+YGN         SIEIWYATSEYL+QEMNPNFRMTDPFNPVH+MSFSGARGNASQVHQLVGM
Subjt:  ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGN---------SIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGM

Query:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK
        RGLMSDPQGQMIDLPIQSNLREGLSLT+YIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSP NK
Subjt:  RGLMSDPQGQMIDLPIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCACTACTACATCCATTTCATTAGGAATTGATGATCTTTTAACAATCCCTTCTAAGGGATGGCTAGTCCAAGATGCTAAACAACTAAGTTTGATTTTGGAAAAA
CACCATAATTATGGAAACTCCATTGAGATATGGTATGCTACAAGTGAATATTTGCAACAAGAAATGAATCCTAATTTTAGGATGACTGACCCTTTTAATCCAGTC
CATATAATGTCTTTTTCGGGAGCTCGAGGAAATGCATCTCAAGTACACCAATTAGTAGGTATGAGAGGATTAATGTCCGATCCACAAGGACAAATGATTGATTTA
CCCATTCAAAGCAATTTACGTGAGGGGCTGTCCTTAACGAAATATATAATTTCTTGCTACGGAGCGCGTAAAGGAGTTGTGGATACTGCTGTACGAACATCGGAT
GCTGGATATCTTACACGCAGACTTGTTGAAGTCGTTCAACACATTGTTGTACGTAGAACCGATTGTGGAACCATCCGAGGGATTTCAGTGAGTCCTGAAAATAAG
ATAGATTCCAGAAAGAATTTTTATCCAAAAAATTAA
mRNA sequenceShow/hide mRNA sequence
GCCACTACTACATCCATTTCATTAGGAATTGATGATCTTTTAACAATCCCTTCTAAGGGATGGCTAGTCCAAGATGCTAAACAACTAAGTTTGATTTTGGAAAAA
CACCATAATTATGGAAACTCCATTGAGATATGGTATGCTACAAGTGAATATTTGCAACAAGAAATGAATCCTAATTTTAGGATGACTGACCCTTTTAATCCAGTC
CATATAATGTCTTTTTCGGGAGCTCGAGGAAATGCATCTCAAGTACACCAATTAGTAGGTATGAGAGGATTAATGTCCGATCCACAAGGACAAATGATTGATTTA
CCCATTCAAAGCAATTTACGTGAGGGGCTGTCCTTAACGAAATATATAATTTCTTGCTACGGAGCGCGTAAAGGAGTTGTGGATACTGCTGTACGAACATCGGAT
GCTGGATATCTTACACGCAGACTTGTTGAAGTCGTTCAACACATTGTTGTACGTAGAACCGATTGTGGAACCATCCGAGGGATTTCAGTGAGTCCTGAAAATAAG
ATAGATTCCAGAAAGAATTTTTATCCAAAAAATTAA
Protein sequenceShow/hide protein sequence
ATTTSISLGIDDLLTIPSKGWLVQDAKQLSLILEKHHNYGNSIEIWYATSEYLQQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDL
PIQSNLREGLSLTKYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPENKIDSRKNFYPKN