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CmaCh01G009090 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G009090
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionProtein PSY3
Genome locationCma_Chr01:5471173..5471716
RNA-Seq ExpressionCmaCh01G009090
SyntenyCmaCh01G009090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031836.1 Protein PSY3 [Cucumis melo var. makuwa]1.3e-0955.22Show/hide
Query:  KARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPPEFNAFTVADDESNKK
        KARL LFLLLSF L++SARI+PH E Q    +INDY +PGAN RHDP  PP +    +V      KK
Subjt:  KARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPPEFNAFTVADDESNKK

KAA0031838.1 hypothetical protein E6C27_scaffold848G00880 [Cucumis melo var. makuwa]1.2e-1057.75Show/hide
Query:  FKARL-CLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPP-EFNAFTVADDESNKKP
        FKARL  LFLLLSF L++SARI+PH E Q    +INDY +PGAN RHDP  PPP +F    V D +  K P
Subjt:  FKARL-CLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPP-EFNAFTVADDESNKKP

KAG6607579.1 hypothetical protein SDJN03_00921, partial [Cucurbita argyrosperma subsp. sororia]1.0e-0954.79Show/hide
Query:  MEFKARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLP--PPEFNAFTVADDESNKKP
        MEFKARLCLFLLLSF L+SSAR + H  +Q T  V+ DY +PG      P  P  PP F  F V DD  N KP
Subjt:  MEFKARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLP--PPEFNAFTVADDESNKKP

KGN65816.1 hypothetical protein Csa_023196 [Cucumis sativus]2.6e-1062.71Show/hide
Query:  KARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPPEFNAFTV
        KARL LFLLLSF L +SARI+PH E Q  T ++NDY++PGAN RHDP  PPP  ++F V
Subjt:  KARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPPEFNAFTV

XP_038895781.1 circumsporozoite protein-like [Benincasa hispida]9.1e-1158.82Show/hide
Query:  FKARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPPEFNAFTVADDESNKK
        FKARL  FLLLSF LI+ ARI PH E Q  T+ INDYA+PGAN RHDP  PP   N +  AD  +N +
Subjt:  FKARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPPEFNAFTVADDESNKK

TrEMBL top hitse value%identityAlignment
A0A0A0LV67 Uncharacterized protein2.9e-1054.29Show/hide
Query:  KARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPPE--FNAFTVADDESNKKP
        KARL L LLLSF L++SARI+PH E Q    +INDY +PGAN RH+P  PPP   F    V D +  K P
Subjt:  KARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPPE--FNAFTVADDESNKKP

A0A0A0M0T8 Uncharacterized protein1.3e-1062.71Show/hide
Query:  KARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPPEFNAFTV
        KARL LFLLLSF L +SARI+PH E Q  T ++NDY++PGAN RHDP  PPP  ++F V
Subjt:  KARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPPEFNAFTV

A0A5A7SMH7 Uncharacterized protein5.8e-1157.75Show/hide
Query:  FKARL-CLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPP-EFNAFTVADDESNKKP
        FKARL  LFLLLSF L++SARI+PH E Q    +INDY +PGAN RHDP  PPP +F    V D +  K P
Subjt:  FKARL-CLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPP-EFNAFTVADDESNKKP

A0A5A7SPC6 Protein PSY36.4e-1055.22Show/hide
Query:  KARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPPEFNAFTVADDESNKK
        KARL LFLLLSF L++SARI+PH E Q    +INDY +PGAN RHDP  PP +    +V      KK
Subjt:  KARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPPEFNAFTVADDESNKK

A0A5D3BBU7 Uncharacterized protein9.2e-0950.72Show/hide
Query:  KARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPP-EFNAFTVADDESNKKP
        K RL L LLLSF +++ ARI+PH E Q     INDY +PGAN RHDP  PPP +F    V      K P
Subjt:  KARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPP-EFNAFTVADDESNKKP

SwissProt top hitse value%identityAlignment
Q8S8P7 Protein PSY35.0e-0450Show/hide
Query:  LCLFLLLSFTLISSARIVPHPEEQATTVV--------INDYAEPGANNRHDP
        LCLFL  +F L+SSARI     E   TVV         NDY++P AN RHDP
Subjt:  LCLFLLLSFTLISSARIVPHPEEQATTVV--------INDYAEPGANNRHDP

Arabidopsis top hitse value%identityAlignment
AT2G29995.1 unknown protein3.6e-0550Show/hide
Query:  LCLFLLLSFTLISSARIVPHPEEQATTVV--------INDYAEPGANNRHDP
        LCLFL  +F L+SSARI     E   TVV         NDY++P AN RHDP
Subjt:  LCLFLLLSFTLISSARIVPHPEEQATTVV--------INDYAEPGANNRHDP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTAAAGCTCGTCTTTGCCTCTTCCTTTTGCTCTCGTTCACCCTCATCAGCTCAGCTCGAATTGTGCCTCATCCAGAAGAACAAGCAACAACGGTTGTGATAAA
TGACTATGCTGAACCAGGAGCTAATAACAGACATGATCCAAGGCTTCCACCACCAGAGTTTAACGCTTTTACCGTTGCCGATGACGAGAGCAATAAGAAACCCTACACAA
ATTTGTTTATTGGAAGACAACTTGTTGGCAGAAGCATCAACAAGGAAACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTAAAGCTCGTCTTTGCCTCTTCCTTTTGCTCTCGTTCACCCTCATCAGCTCAGCTCGAATTGTGCCTCATCCAGAAGAACAAGCAACAACGGTTGTGATAAA
TGACTATGCTGAACCAGGAGCTAATAACAGACATGATCCAAGGCTTCCACCACCAGAGTTTAACGCTTTTACCGTTGCCGATGACGAGAGCAATAAGAAACCCTACACAA
ATTTGTTTATTGGAAGACAACTTGTTGGCAGAAGCATCAACAAGGAAACGTAAACAAAGAGCTAATGATGTGCCAAAGTAATAATAGTACTAAAAATATTATATTATTGA
TGTAAATTATGGAATAATATGTTATCAAATTAATGTAATGAAGAAAATAGTATGGTACTAAACCAAAATATCTATTAAATTTTTTTG
Protein sequenceShow/hide protein sequence
MEFKARLCLFLLLSFTLISSARIVPHPEEQATTVVINDYAEPGANNRHDPRLPPPEFNAFTVADDESNKKPYTNLFIGRQLVGRSINKET