; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh01G009130 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G009130
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRibonuclease P
Genome locationCma_Chr01:5543330..5544305
RNA-Seq ExpressionCmaCh01G009130
SyntenyCmaCh01G009130
Gene Ontology termsGO:0001682 - tRNA 5'-leader removal (biological process)
GO:0006364 - rRNA processing (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0000172 - ribonuclease MRP complex (cellular component)
GO:0005655 - nucleolar ribonuclease P complex (cellular component)
GO:0004526 - ribonuclease P activity (molecular function)
GO:0033204 - ribonuclease P RNA binding (molecular function)
InterPro domainsIPR002759 - RNase P subunit Pop5/Rpp14/Rnp2-like
IPR038085 - RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139703.1 probable ribonuclease P/MRP protein subunit POP5 [Cucumis sativus]2.1e-7187.66Show/hide
Query:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MV FKNRY+VFEV+LDPNKD+ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITK+CIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN
        LLDL+GN+RACKNTALR++ LKFEQYKLMVG  + D VNLQMQNCLEKI TL+N
Subjt:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN

XP_022932062.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita moschata]5.4e-8098.05Show/hide
Query:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQV+YVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN
        LLDLTGNSRACKNTALR+DELKFEQYKLMVGPRISDGVNLQMQNCLEKIR+LDN
Subjt:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN

XP_022972913.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita maxima]3.8e-81100Show/hide
Query:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN
        LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN
Subjt:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN

XP_023524475.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita pepo subsp. pepo]3.5e-7997.4Show/hide
Query:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVSFKNRYLVFEV LDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQV+YVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN
        LLDLTGNSRACKNTALRVDELKFEQYKLMVGP ISDGVNLQM NCLEKIRTLDN
Subjt:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN

XP_038899949.1 probable ribonuclease P/MRP protein subunit POP5 [Benincasa hispida]4.2e-7288.31Show/hide
Query:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MV FKNRY+V EV+LDPNKD+ TDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVR+ISNCPVVFN
Subjt:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN
        LLDL+GN+RACKNTALR+D+LKFEQYKLMVG R+ D VNLQMQNCLEKI TL++
Subjt:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN

TrEMBL top hitse value%identityAlignment
A0A1S3CEI9 Ribonuclease P9.4e-7085.71Show/hide
Query:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MV FKNRY+VFEV+LDPNK++ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN
        LLDL+GN+RACKNTALR+D LKFEQYKLMVG  + D V + MQNCLEKI  L+N
Subjt:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN

A0A5D3CDD4 Ribonuclease P2.5e-7086.36Show/hide
Query:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MV FKNRY+VFEV+LDPNK++ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN
        LLDL+GN+RACKNTALR+D LKFEQYKLMVG  + D V +QMQNCLEKI  L+N
Subjt:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN

A0A6J1CLH1 Ribonuclease P6.7e-6883.01Show/hide
Query:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MV ++NRYL+ EV+LDP KD ATDD IIITQYN+SKAIKDSILLNFGECGFAS+LGSFQV+YVNPITKLCIIR S+EDYQ VWAAITMVR+I NCPV+FN
Subjt:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLD
        LLDL GN+RACKNTALR +ELKFEQYKLMVG R+SD VNLQMQNCLEKIRT D
Subjt:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLD

A0A6J1EVL4 Ribonuclease P2.6e-8098.05Show/hide
Query:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQV+YVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN
        LLDLTGNSRACKNTALR+DELKFEQYKLMVGPRISDGVNLQMQNCLEKIR+LDN
Subjt:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN

A0A6J1IBH7 Ribonuclease P1.8e-81100Show/hide
Query:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
Subjt:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN
        LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN
Subjt:  LLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN

SwissProt top hitse value%identityAlignment
Q1JQ92 Ribonuclease P/MRP protein subunit POP52.6e-0832.48Show/hide
Query:  MVSFKNRYLVFEVVL-DPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISN----C
        MV FK+RYL+ EVV  DP   +  +D ++ T       ++D+I    G  G A+    F V+Y+N  T + ++R  +E Y+ VW+A+  + S+ N     
Subjt:  MVSFKNRYLVFEVVL-DPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISN----C

Query:  PVVFNLLDLTGNSRACK
        P   N L + G  R C+
Subjt:  PVVFNLLDLTGNSRACK

Q54EP3 Probable ribonuclease P/MRP protein subunit POP54.3e-1130.51Show/hide
Query:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN
        MV  KNRYL+ EV+   N+         + Q+ +S  +K+ +    GE  + +   + ++ YVNP T + IIR S E Y+++W A+T++ S    P+ F 
Subjt:  MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFN

Query:  LLDLTGNSRACKNTALRV
        ++ + G+ R C+  A+++
Subjt:  LLDLTGNSRACKNTALRV

Q6AWV1 Probable ribonuclease P/MRP protein subunit POP52.6e-4861.29Show/hide
Query:  MVSFKNRYLVFEVVLDPNKDVATD-DPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVF
        MV FKNRY++ EV LDP+KD+  +  PII+TQ+N+SKAIKDSIL+NFGECG  SSLGSFQVKYVNPITKLCI+R+SRE+++ VW AIT+V+SI NCPV+ 
Subjt:  MVSFKNRYLVFEVVLDPNKDVATD-DPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVF

Query:  NLLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN
        NLLD++G  RAC++TAL+ D+ KFEQ        +S+    QM   LEKI+ L+N
Subjt:  NLLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN

Q969H6 Ribonuclease P/MRP protein subunit POP51.8e-0933.33Show/hide
Query:  MVSFKNRYLVFEVVL-DPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISN----C
        MV FK+RYL+ E+V  DP   ++ DD ++      S  ++D+I    G  G A+    F V+Y+N  T + ++R  +E YQ VW+A+  +  + N     
Subjt:  MVSFKNRYLVFEVVL-DPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISN----C

Query:  PVVFNLLDLTGNSRACK
        P  FN L + G  R C+
Subjt:  PVVFNLLDLTGNSRACK

Q9UU90 Ribonuclease P/MRP protein subunit POP51.2e-1332.85Show/hide
Query:  MVSFKNRYLVFEVVLDPNKDVATDDPII-----ITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNC
        MV FK+RYL+FE VL P      D P I     IT  ++SK I+  +  NFG+ G      S  VKY +P T   I+R SR+ ++  WAA+ ++R +   
Subjt:  MVSFKNRYLVFEVVLDPNKDVATDDPII-----ITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNC

Query:  PVVFNLLDLTGNSRACKNTALRVDELKFEQYKLMVGP
        PV+  ++ ++G  +  +  A+  ++ +     LM  P
Subjt:  PVVFNLLDLTGNSRACKNTALRVDELKFEQYKLMVGP

Arabidopsis top hitse value%identityAlignment
AT1G04635.1 ribonuclease P family protein / Rpp14 family protein1.8e-4961.29Show/hide
Query:  MVSFKNRYLVFEVVLDPNKDVATD-DPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVF
        MV FKNRY++ EV LDP+KD+  +  PII+TQ+N+SKAIKDSIL+NFGECG  SSLGSFQVKYVNPITKLCI+R+SRE+++ VW AIT+V+SI NCPV+ 
Subjt:  MVSFKNRYLVFEVVLDPNKDVATD-DPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVF

Query:  NLLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN
        NLLD++G  RAC++TAL+ D+ KFEQ        +S+    QM   LEKI+ L+N
Subjt:  NLLDLTGNSRACKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGTTTTAAGAACCGATACTTGGTGTTTGAAGTTGTGTTGGATCCCAATAAAGACGTTGCAACAGATGATCCTATTATCATTACCCAATATAATGTTTCAAAAGC
AATCAAGGACAGTATTCTTCTCAACTTCGGGGAGTGTGGCTTTGCTTCCTCACTTGGATCTTTTCAAGTTAAGTATGTAAATCCAATCACAAAGCTGTGTATCATTAGAG
CCTCTAGAGAGGACTACCAGAATGTATGGGCTGCAATTACAATGGTGAGGAGTATCAGCAATTGCCCCGTTGTATTTAATCTACTGGACCTAACTGGAAACAGCAGGGCT
TGCAAGAACACCGCCTTGAGGGTGGATGAACTGAAATTTGAGCAGTACAAGCTTATGGTTGGACCTCGTATCTCTGATGGCGTCAATCTGCAAATGCAGAACTGTCTGGA
GAAGATTAGAACTTTAGATAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGTTTTAAGAACCGATACTTGGTGTTTGAAGTTGTGTTGGATCCCAATAAAGACGTTGCAACAGATGATCCTATTATCATTACCCAATATAATGTTTCAAAAGC
AATCAAGGACAGTATTCTTCTCAACTTCGGGGAGTGTGGCTTTGCTTCCTCACTTGGATCTTTTCAAGTTAAGTATGTAAATCCAATCACAAAGCTGTGTATCATTAGAG
CCTCTAGAGAGGACTACCAGAATGTATGGGCTGCAATTACAATGGTGAGGAGTATCAGCAATTGCCCCGTTGTATTTAATCTACTGGACCTAACTGGAAACAGCAGGGCT
TGCAAGAACACCGCCTTGAGGGTGGATGAACTGAAATTTGAGCAGTACAAGCTTATGGTTGGACCTCGTATCTCTGATGGCGTCAATCTGCAAATGCAGAACTGTCTGGA
GAAGATTAGAACTTTAGATAACTGATTTGGTTGAATTTTGAATTTTATTTCATATTGTTCTCATTTGATGTGGCTCAGCCCCTCTTCAGGTGTGTTTTTGCTACCGTAGT
CTGGCTCTTTATATGGGTATGATTTTCGAATCTTTCATATTAGGAAAAAAGATGTTTAATTCTGAAAATATTGAAGGCATTCTTAAGTTAGATATACGCAAGGAATAGAG
Protein sequenceShow/hide protein sequence
MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQVKYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLTGNSRA
CKNTALRVDELKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN