; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh01G009360 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G009360
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationCma_Chr01:5849327..5850838
RNA-Seq ExpressionCmaCh01G009360
SyntenyCmaCh01G009360
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006468 - protein phosphorylation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008097 - 5S rRNA binding (molecular function)
GO:0030247 - polysaccharide binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN73071.1 hypothetical protein VITISV_032383 [Vitis vinifera]3.2e-27092.59Show/hide
Query:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN
        MDEE++ALQQN TW LVPRP NTNIVGSKWVFR KY PDGSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFLN
Subjt:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN

Query:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH
        GTL E V+MEQPPGY+DPRFP HVCLLKKALYGLKQAPRAWFQRFSSFLLTLGF CSRADTSLFVFHQQS+LIYLLLYVDDIIVTGNN SL++SFTRKLH
Subjt:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH

Query:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL
        SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFL
Subjt:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL

Query:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT
        HAPT DHFLAVKRILRYVKGTLHFGL FRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNL+SWSAKKQPTVSRSSCESEYRALA TAAELLW+T
Subjt:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT

Query:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRGG
        HLLHDLKVPI  QPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELV+A KLRT+YVPSHLQVADIFTKS+SRPLFEFFRSKLH+RSNPTLSLRGG
Subjt:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRGG

RVW19545.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.0e-27393.04Show/hide
Query:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN
        MDEE++ALQQN TWTLVPRP NTNIVGSKWVFR KYLPDGSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFLN
Subjt:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN

Query:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH
        GTL E V+MEQPPGY+DPRFP HVCLLKKALYGLKQAPRAWFQRFSSFLLTLGF CSRADTSLFVFHQQS+LIYLLLYVDDIIVTGNN SL++SFTRKLH
Subjt:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH

Query:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL
        SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFL
Subjt:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL

Query:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT
        HAPT DHFLAVKRILRYVKGTLHFGL FRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNL+SWSAKKQPTVSRSSCESEYRALA TAAELLW+T
Subjt:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT

Query:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRGGV
        HLLHDLKVPI  QPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELV+A KLRTQYVPSHLQVADIFTKS+SRPLFEFFRSKLH+RSNPTLSLRGGV
Subjt:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRGGV

Query:  KDS
        KD+
Subjt:  KDS

RVW41798.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.0e-25291.79Show/hide
Query:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN
        MDEE++ALQQN TW LVPRP NTNIVGSKWVFR KYLPDGSVER KARLVAKGYT VPGLDYTD FSPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFLN
Subjt:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN

Query:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH
        GTL E V+MEQPPGY+D RFP HVCLLKKALYGLKQAPRAWFQRFSSFLLTLGF CSRADTSLFVFHQQS+LIYLLLYVDDIIVTGNN SL++SFTRKLH
Subjt:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH

Query:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL
        SEFATKDLGSL+YFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFL
Subjt:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL

Query:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT
        HAPT DHFLAVKRILRYVKGTLHFGL FRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNL+SWSAKKQPTVSRSSCESEYRALA TAAELLW+T
Subjt:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT

Query:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSIS
        HLLHDLKVPI  QPLLLCDNKSAIF SSNPVSHKRAKHVELDYHFLRELV+A KLRTQYVPSHLQVADIFTKS S
Subjt:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSIS

RVW45095.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]4.0e-26591.37Show/hide
Query:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN
        MDEE++ALQQN TW LV RP NTNIVGSKWVFR KY PDGSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+AVTNKWPLRQLDV NAFLN
Subjt:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN

Query:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH
        GTL E V+MEQPPGY+DPRFP HVCLLKKALYGLKQAPRAWFQRFSSF LTLGF CSRADTSLFVFHQQS+LIYLLLYVDDIIVTGNN SL++SFTRKLH
Subjt:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH

Query:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL
        S+FATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRA LLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFL
Subjt:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL

Query:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT
        HA T DHFLAVKRILRYVKGTLHFGL FRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNL+SWSAKKQPTVSRSSCESEYRALA T AELLW+T
Subjt:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT

Query:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRG
        HLLHDLKVPI  QPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELV+A KLRTQYVPSHLQVADIFTKS+SRPLFEFFRSKLH+RSNPTLSLRG
Subjt:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRG

RVX01763.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]2.3e-25291.58Show/hide
Query:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN
        MDEE++ALQQN TW LVPRP NTNIVGSKWVFR KYLPDGSVER KARLVAKGYT VPGLDYTD FSPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFLN
Subjt:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN

Query:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH
        GTL E V+MEQPPGY+D RFP HVCLLKKALYGLKQAPRAWFQRFSSFLLTLGF CSRADTSLFVFHQQS+LIYLLLYVDDIIVTGNN SL++SFTRKLH
Subjt:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH

Query:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL
        SEFATKDLGSL+YFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFL
Subjt:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL

Query:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT
        HAPT DHFLAVKRILRYVKGTLHFGL FRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNL+SW+AKKQPTVSRSSCESEYRALA TAAELLW+T
Subjt:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT

Query:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSIS
        HLLHDLKVPI  QPLLLCDNKSAIF SSNPVSHKRAKHVELDYHFLRELV+A KLRTQYVPSHLQVADIFTKS S
Subjt:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSIS

TrEMBL top hitse value%identityAlignment
A0A438C8F7 Retrovirus-related Pol polyprotein from transposon RE15.1e-27493.04Show/hide
Query:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN
        MDEE++ALQQN TWTLVPRP NTNIVGSKWVFR KYLPDGSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFLN
Subjt:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN

Query:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH
        GTL E V+MEQPPGY+DPRFP HVCLLKKALYGLKQAPRAWFQRFSSFLLTLGF CSRADTSLFVFHQQS+LIYLLLYVDDIIVTGNN SL++SFTRKLH
Subjt:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH

Query:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL
        SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFL
Subjt:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL

Query:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT
        HAPT DHFLAVKRILRYVKGTLHFGL FRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNL+SWSAKKQPTVSRSSCESEYRALA TAAELLW+T
Subjt:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT

Query:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRGGV
        HLLHDLKVPI  QPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELV+A KLRTQYVPSHLQVADIFTKS+SRPLFEFFRSKLH+RSNPTLSLRGGV
Subjt:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRGGV

Query:  KDS
        KD+
Subjt:  KDS

A0A438E275 Retrovirus-related Pol polyprotein from transposon RE14.9e-25391.79Show/hide
Query:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN
        MDEE++ALQQN TW LVPRP NTNIVGSKWVFR KYLPDGSVER KARLVAKGYT VPGLDYTD FSPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFLN
Subjt:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN

Query:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH
        GTL E V+MEQPPGY+D RFP HVCLLKKALYGLKQAPRAWFQRFSSFLLTLGF CSRADTSLFVFHQQS+LIYLLLYVDDIIVTGNN SL++SFTRKLH
Subjt:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH

Query:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL
        SEFATKDLGSL+YFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFL
Subjt:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL

Query:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT
        HAPT DHFLAVKRILRYVKGTLHFGL FRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNL+SWSAKKQPTVSRSSCESEYRALA TAAELLW+T
Subjt:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT

Query:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSIS
        HLLHDLKVPI  QPLLLCDNKSAIF SSNPVSHKRAKHVELDYHFLRELV+A KLRTQYVPSHLQVADIFTKS S
Subjt:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSIS

A0A438EBA0 Retrovirus-related Pol polyprotein from transposon TNT 1-941.9e-26591.37Show/hide
Query:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN
        MDEE++ALQQN TW LV RP NTNIVGSKWVFR KY PDGSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+AVTNKWPLRQLDV NAFLN
Subjt:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN

Query:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH
        GTL E V+MEQPPGY+DPRFP HVCLLKKALYGLKQAPRAWFQRFSSF LTLGF CSRADTSLFVFHQQS+LIYLLLYVDDIIVTGNN SL++SFTRKLH
Subjt:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH

Query:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL
        S+FATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRA LLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFL
Subjt:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL

Query:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT
        HA T DHFLAVKRILRYVKGTLHFGL FRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNL+SWSAKKQPTVSRSSCESEYRALA T AELLW+T
Subjt:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT

Query:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRG
        HLLHDLKVPI  QPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELV+A KLRTQYVPSHLQVADIFTKS+SRPLFEFFRSKLH+RSNPTLSLRG
Subjt:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRG

A0A438IYJ9 Retrovirus-related Pol polyprotein from transposon RE11.1e-25291.58Show/hide
Query:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN
        MDEE++ALQQN TW LVPRP NTNIVGSKWVFR KYLPDGSVER KARLVAKGYT VPGLDYTD FSPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFLN
Subjt:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN

Query:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH
        GTL E V+MEQPPGY+D RFP HVCLLKKALYGLKQAPRAWFQRFSSFLLTLGF CSRADTSLFVFHQQS+LIYLLLYVDDIIVTGNN SL++SFTRKLH
Subjt:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH

Query:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL
        SEFATKDLGSL+YFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFL
Subjt:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL

Query:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT
        HAPT DHFLAVKRILRYVKGTLHFGL FRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNL+SW+AKKQPTVSRSSCESEYRALA TAAELLW+T
Subjt:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT

Query:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSIS
        HLLHDLKVPI  QPLLLCDNKSAIF SSNPVSHKRAKHVELDYHFLRELV+A KLRTQYVPSHLQVADIFTKS S
Subjt:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSIS

A5C5R8 Integrase catalytic domain-containing protein1.5e-27092.59Show/hide
Query:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN
        MDEE++ALQQN TW LVPRP NTNIVGSKWVFR KY PDGSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFLN
Subjt:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN

Query:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH
        GTL E V+MEQPPGY+DPRFP HVCLLKKALYGLKQAPRAWFQRFSSFLLTLGF CSRADTSLFVFHQQS+LIYLLLYVDDIIVTGNN SL++SFTRKLH
Subjt:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLH

Query:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL
        SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLT  GSPFS+PTLYRSLVGALQYLTITRPDIA+AVNSVSQFL
Subjt:  SEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFL

Query:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT
        HAPT DHFLAVKRILRYVKGTLHFGL FRPST+PS LVAYSDADWAGCPDTRRSTSGYSIYLGNNL+SWSAKKQPTVSRSSCESEYRALA TAAELLW+T
Subjt:  HAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVT

Query:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRGG
        HLLHDLKVPI  QPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELV+A KLRT+YVPSHLQVADIFTKS+SRPLFEFFRSKLH+RSNPTLSLRGG
Subjt:  HLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRGG

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.5e-9237.68Show/hide
Query:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN
        ++ E+ A + N+TWT+  RP N NIV S+WVF +KY   G+  R+KARLVA+G+TQ   +DY +TF+PV + ++ R +LS+ +     + Q+DVK AFLN
Subjt:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN

Query:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQ--SNLIYLLLYVDDIIVTGNNSSLINSFTRK
        GTL E ++M  P G        +VC L KA+YGLKQA R WF+ F   L    F  S  D  +++  +   +  IY+LLYVDD+++   + + +N+F R 
Subjt:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQ--SNLIYLLLYVDDIIVTGNNSSLINSFTRK

Query:  LHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTI-TRPDIAYAVNSVS
        L  +F   DL  + +F+G+      D +++SQ  Y + IL++  + +   V TP+    +     S     T  RSL+G L Y+ + TRPD+  AVN +S
Subjt:  LHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTI-TRPDIAYAVNSVS

Query:  QFLHAPTADHFLAVKRILRYVKGTLHFGLIFRPS-TVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGN-NLISWSAKKQPTVSRSSCESEYRALATTAAE
        ++     ++ +  +KR+LRY+KGT+   LIF+ +    + ++ Y D+DWAG    R+ST+GY   + + NLI W+ K+Q +V+ SS E+EY AL     E
Subjt:  QFLHAPTADHFLAVKRILRYVKGTLHFGLIFRPS-TVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGN-NLISWSAKKQPTVSRSSCESEYRALATTAAE

Query:  LLWVTHLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKL
         LW+  LL  + + +     +  DN+  I +++NP  HKRAKH+++ YHF RE V  + +  +Y+P+  Q+ADIFTK +    F   R KL
Subjt:  LLWVTHLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.2e-9038.84Show/hide
Query:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN
        M EE+ +LQ+N T+ LV  P     +  KWVF++K   D  + R+KARLV KG+ Q  G+D+ + FSPVVK T++R +LS+A +    + QLDVK AFL+
Subjt:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN

Query:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSL-FVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKL
        G L E ++MEQP G+        VC L K+LYGLKQAPR W+ +F SF+ +  +  + +D  + F    ++N I LLLYVDD+++ G +  LI      L
Subjt:  GTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSL-FVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKL

Query:  HSEFATKDLGSLSYFLGLE--ASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFS-------DPTLYRSLVGALQY-LTITRPDI
           F  KDLG     LG++     T   L++SQ KY   +L R  + ++KPV TP+     L+    P +           Y S VG+L Y +  TRPDI
Subjt:  HSEFATKDLGSLSYFLGLE--ASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFS-------DPTLYRSLVGALQY-LTITRPDI

Query:  AYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRAL
        A+AV  VS+FL  P  +H+ AVK ILRY++GT    L F  S     L  Y+DAD AG  D R+S++GY        ISW +K Q  V+ S+ E+EY A 
Subjt:  AYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRAL

Query:  ATTAAELLWVTHLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVR
          T  E++W+   L +L +    + ++ CD++SAI LS N + H R KH+++ YH++RE+V  + L+   + ++   AD+ TK + R  FE  +  + + 
Subjt:  ATTAAELLWVTHLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVR

Query:  SN
        SN
Subjt:  SN

P92519 Uncharacterized mitochondrial protein AtMg008101.3e-6454.42Show/hide
Query:  IYLLLYVDDIIVTGNNSSLINSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLY
        +YLLLYVDDI++TG++++L+N    +L S F+ KDLG + YFLG++    P GLF+SQ KYA  IL  A +LD KP+ TP+ +  + +   + + DP+ +
Subjt:  IYLLLYVDDIIVTGNNSSLINSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLY

Query:  RSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAK
        RS+VGALQYLT+TRPDI+YAVN V Q +H PT   F  +KR+LRYVKGT+  GL    ++    + A+ D+DWAGC  TRRST+G+  +LG N+ISWSAK
Subjt:  RSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAK

Query:  KQPTVSRSSCESEYRALATTAAELLW
        +QPTVSRSS E+EYRALA TAAEL W
Subjt:  KQPTVSRSSCESEYRALATTAAELLW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.1e-14451.21Show/hide
Query:  MDEEIRALQQNDTWTLV-PRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFL
        M  EI A   N TW LV P P++  IVG +W+F  KY  DGS+ R+KARLVAKGY Q PGLDY +TFSPV+K+T++R+VL +AV   WP+RQLDV NAFL
Subjt:  MDEEIRALQQNDTWTLV-PRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFL

Query:  NGTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKL
         GTL + V+M QPPG++D   P +VC L+KALYGLKQAPRAW+    ++LLT+GF  S +DTSLFV  +  +++Y+L+YVDDI++TGN+ +L+++    L
Subjt:  NGTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKL

Query:  HSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQ
           F+ KD   L YFLG+EA   P GL +SQ +Y  D+L R  ++ +KPV TPM  S  L+   G+  +DPT YR +VG+LQYL  TRPDI+YAVN +SQ
Subjt:  HSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQ

Query:  FLHAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLW
        F+H PT +H  A+KRILRY+ GT + G+  +     S L AYSDADWAG  D   ST+GY +YLG++ ISWS+KKQ  V RSS E+EYR++A T++E+ W
Subjt:  FLHAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLW

Query:  VTHLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNP
        +  LL +L + ++  P++ CDN  A +L +NPV H R KH+ +DYHF+R  V +  LR  +V +H Q+AD  TK +SR  F+ F SK+ V   P
Subjt:  VTHLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.3e-14351.42Show/hide
Query:  MDEEIRALQQNDTWTLV-PRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFL
        M  EI A   N TW LV P P +  IVG +W+F  K+  DGS+ R+KARLVAKGY Q PGLDY +TFSPV+K+T++R+VL +AV   WP+RQLDV NAFL
Subjt:  MDEEIRALQQNDTWTLV-PRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFL

Query:  NGTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKL
         GTL + V+M QPPG+VD   P +VC L+KA+YGLKQAPRAW+    ++LLT+GF  S +DTSLFV  +  ++IY+L+YVDDI++TGN++ L+      L
Subjt:  NGTLIERVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKL

Query:  HSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQ
           F+ K+   L YFLG+EA   P GL +SQ +Y  D+L R  +L +KPV TPM  S  LT   G+   DPT YR +VG+LQYL  TRPD++YAVN +SQ
Subjt:  HSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQ

Query:  FLHAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLW
        ++H PT DH+ A+KR+LRY+ GT   G+  +     S L AYSDADWAG  D   ST+GY +YLG++ ISWS+KKQ  V RSS E+EYR++A T++EL W
Subjt:  FLHAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLW

Query:  VTHLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNP
        +  LL +L + +S  P++ CDN  A +L +NPV H R KH+ LDYHF+R  V +  LR  +V +H Q+AD  TK +SR  F+ F  K+ V   P
Subjt:  VTHLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.4e-11447.02Show/hide
Query:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN
        MD+EI A++   TW +   P N   +G KWV++IKY  DG++ER+KARLVAKGYTQ  G+D+ +TFSPV K T+V+++L+I+    + L QLD+ NAFLN
Subjt:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN

Query:  GTLIERVHMEQPPGYV----DPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFT
        G L E ++M+ PPGY     D   P  VC LKK++YGLKQA R WF +FS  L+  GF  S +D + F+    +  + +L+YVDDII+  NN + ++   
Subjt:  GTLIERVHMEQPPGYV----DPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFT

Query:  RKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNS
         +L S F  +DLG L YFLGLE + +  G+ I Q KYA D+L    LL  KP   PM  S   +A  G  F D   YR L+G L YL ITR DI++AVN 
Subjt:  RKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTA-DGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNS

Query:  VSQFLHAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAE
        +SQF  AP   H  AV +IL Y+KGT+  GL F  S     L  +SDA +  C DTRRST+GY ++LG +LISW +KKQ  VS+SS E+EYRAL+    E
Subjt:  VSQFLHAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAE

Query:  LLWVTHLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRE
        ++W+     +L++P+S   LL CDN +AI +++N V H+R KH+E D H +RE
Subjt:  LLWVTHLLHDLKVPISPQPLLLCDNKSAIFLSSNPVSHKRAKHVELDYHFLRE

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.5e-1552.56Show/hide
Query:  YLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGY
        YLTITRPD+ +AVN +SQF  A       AV ++L YVKGT+  GL F  +T    L A++D+DWA CPDTRRS +G+
Subjt:  YLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGY

ATMG00810.1 DNA/RNA polymerases superfamily protein9.1e-6654.42Show/hide
Query:  IYLLLYVDDIIVTGNNSSLINSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLY
        +YLLLYVDDI++TG++++L+N    +L S F+ KDLG + YFLG++    P GLF+SQ KYA  IL  A +LD KP+ TP+ +  + +   + + DP+ +
Subjt:  IYLLLYVDDIIVTGNNSSLINSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLY

Query:  RSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAK
        RS+VGALQYLT+TRPDI+YAVN V Q +H PT   F  +KR+LRYVKGT+  GL    ++    + A+ D+DWAGC  TRRST+G+  +LG N+ISWSAK
Subjt:  RSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAK

Query:  KQPTVSRSSCESEYRALATTAAELLW
        +QPTVSRSS E+EYRALA TAAEL W
Subjt:  KQPTVSRSSCESEYRALATTAAELLW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.6e-2052.44Show/hide
Query:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIA
        M EE+ AL +N TW LVP P N NI+G KWVF+ K   DG+++R KARLVAKG+ Q  G+ + +T+SPVV+  T+R +L++A
Subjt:  MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAGAAATTCGAGCGTTACAACAAAATGATACTTGGACTTTGGTTCCTCGCCCTGCCAACACCAACATCGTGGGCTCTAAATGGGTGTTTCGTATTAAA
TATTTGCCCGATGGATCCGTCGAGCGTTTCAAGGCTCGTCTCGTTGCCAAAGGTTATACTCAGGTTCCTGGTCTTGACTACACTGACACTTTCAGTCCAGTTGTC
AAAGCTACCACTGTCCGTGTTGTGCTTTCTATTGCAGTCACAAATAAATGGCCTCTTCGACAACTTGATGTCAAGAATGCTTTTCTCAATGGAACGCTTATTGAA
CGTGTTCATATGGAACAACCTCCTGGGTATGTTGATCCTCGATTTCCAAAGCATGTTTGTCTATTAAAGAAAGCTCTCTATGGCTTAAAGCAAGCTCCTCGTGCT
TGGTTTCAGCGTTTTAGCTCATTTCTTCTCACACTTGGGTTTTTTTGTAGTCGCGCTGACACGTCACTTTTTGTCTTTCATCAGCAATCTAACCTTATCTATTTG
CTTCTTTATGTTGATGACATTATTGTTACCGGCAACAACTCATCTCTTATTAACAGCTTTACTCGCAAGCTTCATTCTGAGTTTGCTACCAAAGATTTGGGTTCT
CTCAGTTACTTTCTTGGTCTTGAAGCTTCACCCACTCCTGATGGTCTCTTTATCAGTCAGTTAAAATATGCTCGAGATATTCTTACTCGTGCTCAGTTGCTCGAT
AGCAAACCAGTTCACACTCCCATGGTTGTTTCTCAACACCTGACTGCTGATGGTTCTCCTTTCTCTGATCCTACTCTCTACAGATCTCTTGTTGGCGCCCTTCAG
TACTTGACTATCACGCGTCCAGATATTGCCTATGCTGTCAATTCTGTCAGTCAATTCTTGCATGCCCCTACTGCAGATCACTTTCTTGCTGTCAAACGTATTCTT
CGCTATGTCAAAGGAACACTCCACTTTGGTCTTATCTTTCGTCCATCCACTGTTCCTAGTACGCTAGTCGCTTATTCGGATGCTGACTGGGCTGGTTGTCCCGAT
ACTCGTCGTTCTACATCCGGCTATTCTATTTATCTTGGTAACAATCTCATTTCTTGGAGTGCCAAAAAGCAACCTACTGTATCACGCTCCAGCTGTGAATCTGAG
TATCGTGCTCTTGCCACAACTGCTGCTGAACTTCTTTGGGTTACGCATCTTTTGCATGACCTCAAGGTCCCTATTTCACCGCAGCCCTTACTCTTATGTGACAAC
AAAAGTGCTATTTTTTTGAGCTCTAATCCTGTTTCTCACAAGCGGGCCAAGCATGTTGAACTAGATTATCATTTCCTTCGAGAACTTGTTATCGCTGACAAACTT
CGTACACAATATGTACCCTCTCATCTCCAAGTTGCTGACATCTTCACAAAGAGTATTTCTCGACCTCTCTTTGAATTTTTCAGATCCAAGCTTCATGTTCGTTCA
AATCCGACGCTCAGCTTGCGGGGGGGTGTTAAGGATAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAGAAATTCGAGCGTTACAACAAAATGATACTTGGACTTTGGTTCCTCGCCCTGCCAACACCAACATCGTGGGCTCTAAATGGGTGTTTCGTATTAAA
TATTTGCCCGATGGATCCGTCGAGCGTTTCAAGGCTCGTCTCGTTGCCAAAGGTTATACTCAGGTTCCTGGTCTTGACTACACTGACACTTTCAGTCCAGTTGTC
AAAGCTACCACTGTCCGTGTTGTGCTTTCTATTGCAGTCACAAATAAATGGCCTCTTCGACAACTTGATGTCAAGAATGCTTTTCTCAATGGAACGCTTATTGAA
CGTGTTCATATGGAACAACCTCCTGGGTATGTTGATCCTCGATTTCCAAAGCATGTTTGTCTATTAAAGAAAGCTCTCTATGGCTTAAAGCAAGCTCCTCGTGCT
TGGTTTCAGCGTTTTAGCTCATTTCTTCTCACACTTGGGTTTTTTTGTAGTCGCGCTGACACGTCACTTTTTGTCTTTCATCAGCAATCTAACCTTATCTATTTG
CTTCTTTATGTTGATGACATTATTGTTACCGGCAACAACTCATCTCTTATTAACAGCTTTACTCGCAAGCTTCATTCTGAGTTTGCTACCAAAGATTTGGGTTCT
CTCAGTTACTTTCTTGGTCTTGAAGCTTCACCCACTCCTGATGGTCTCTTTATCAGTCAGTTAAAATATGCTCGAGATATTCTTACTCGTGCTCAGTTGCTCGAT
AGCAAACCAGTTCACACTCCCATGGTTGTTTCTCAACACCTGACTGCTGATGGTTCTCCTTTCTCTGATCCTACTCTCTACAGATCTCTTGTTGGCGCCCTTCAG
TACTTGACTATCACGCGTCCAGATATTGCCTATGCTGTCAATTCTGTCAGTCAATTCTTGCATGCCCCTACTGCAGATCACTTTCTTGCTGTCAAACGTATTCTT
CGCTATGTCAAAGGAACACTCCACTTTGGTCTTATCTTTCGTCCATCCACTGTTCCTAGTACGCTAGTCGCTTATTCGGATGCTGACTGGGCTGGTTGTCCCGAT
ACTCGTCGTTCTACATCCGGCTATTCTATTTATCTTGGTAACAATCTCATTTCTTGGAGTGCCAAAAAGCAACCTACTGTATCACGCTCCAGCTGTGAATCTGAG
TATCGTGCTCTTGCCACAACTGCTGCTGAACTTCTTTGGGTTACGCATCTTTTGCATGACCTCAAGGTCCCTATTTCACCGCAGCCCTTACTCTTATGTGACAAC
AAAAGTGCTATTTTTTTGAGCTCTAATCCTGTTTCTCACAAGCGGGCCAAGCATGTTGAACTAGATTATCATTTCCTTCGAGAACTTGTTATCGCTGACAAACTT
CGTACACAATATGTACCCTCTCATCTCCAAGTTGCTGACATCTTCACAAAGAGTATTTCTCGACCTCTCTTTGAATTTTTCAGATCCAAGCTTCATGTTCGTTCA
AATCCGACGCTCAGCTTGCGGGGGGGTGTTAAGGATAGTTGA
Protein sequenceShow/hide protein sequence
MDEEIRALQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIE
RVHMEQPPGYVDPRFPKHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFFCSRADTSLFVFHQQSNLIYLLLYVDDIIVTGNNSSLINSFTRKLHSEFATKDLGS
LSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTADGSPFSDPTLYRSLVGALQYLTITRPDIAYAVNSVSQFLHAPTADHFLAVKRIL
RYVKGTLHFGLIFRPSTVPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISPQPLLLCDN
KSAIFLSSNPVSHKRAKHVELDYHFLRELVIADKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRGGVKDS