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CmaCh01G010280 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G010280
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionGlutamate-gated kainate-type ion channel receptor subunit GluR5
Genome locationCma_Chr01:7553253..7553543
RNA-Seq ExpressionCmaCh01G010280
SyntenyCmaCh01G010280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646070.1 hypothetical protein Csa_015561 [Cucumis sativus]8.8e-2072.73Show/hide
Query:  MFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV
        M LSF  RFI  L LVLAL S+S++AARVPT YWEQMLPKKLP+PSSAPSKGTN+VA S+ K +KV+GNLPAK G V
Subjt:  MFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV

KAF4402307.1 hypothetical protein G4B88_003228 [Cannabis sativa]2.6e-1154.55Show/hide
Query:  MFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV
        M  S+R ++  I +L++A   + SEA+R+P EY++QM+PKKLP+PSS+PSKGTNSV +S+ K VK D NLP+  GKV
Subjt:  MFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV

KAG6607702.1 hypothetical protein SDJN03_01044, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3692.55Show/hide
Query:  MSPSIPSQNPPPSFHT--CNIMFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAK
        MSPSIPSQNPPPSFH+   NIMFLSFR RFIFILLLVLALASMSSEAARVPT+YWEQMLPKKLPTPSSAPSKGTNSVASS+FKTVKVDGNLPAK
Subjt:  MSPSIPSQNPPPSFHT--CNIMFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAK

KAG6624344.1 hypothetical protein CIPAW_16G019900 [Carya illinoinensis]1.1e-1160.61Show/hide
Query:  ILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV
        ++L+ L    + SEA+R+P EYWEQMLPKKLP+PSS+PSKGTNS  SS+  T K DG+LP+  GKV
Subjt:  ILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV

TYK23265.1 glutamate-gated kainate-type ion channel receptor subunit GluR5 [Cucumis melo var. makuwa]1.1e-1971.43Show/hide
Query:  MFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV
        M L+F  RFI  L L+LAL S+SS+AARVPT YWEQMLPKKLP+PSSAPSKGTN+VA S+ K +KV+GNLPAK G V
Subjt:  MFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV

TrEMBL top hitse value%identityAlignment
A0A5D3DI56 Glutamate-gated kainate-type ion channel receptor subunit GluR55.5e-2071.43Show/hide
Query:  MFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV
        M L+F  RFI  L L+LAL S+SS+AARVPT YWEQMLPKKLP+PSSAPSKGTN+VA S+ K +KV+GNLPAK G V
Subjt:  MFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV

A0A6N2LUB4 Uncharacterized protein2.8e-1154.55Show/hide
Query:  MFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV
        M +S+R +  F+L  +LA   ++S+A+R+P  YWEQMLPKKLPTPSS+PSKGTNSV+ S   T+K D +L +  GKV
Subjt:  MFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV

A0A7J6I408 Uncharacterized protein1.2e-1154.55Show/hide
Query:  MFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV
        M  S+R ++  I +L++A   + SEA+R+P EY++QM+PKKLP+PSS+PSKGTNSV +S+ K VK D NLP+  GKV
Subjt:  MFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV

A0A7N2MJW9 Uncharacterized protein3.6e-1160Show/hide
Query:  LLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV
        LL  L    + SEA+R+P EYWEQMLPKKLP PSS+PSKGTNS++ S+ K +K + NLP+  GKV
Subjt:  LLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV

A0A803PR73 Uncharacterized protein3.6e-1153.25Show/hide
Query:  MFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV
        M  S+R ++    +L++A   + SEA+R+P EY++QM+PKKLP+PSS+PSKGTNSV +S+ K VK D NLP+  GKV
Subjt:  MFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCTTCCATTCCTTCTCAAAACCCTCCTCCTTCCTTCCACACTTGCAACATCATGTTTCTTTCTTTCCGCCTTCGATTCATTTTCATCCTTCTTCTCGTTCTTGC
CCTCGCCTCCATGTCGTCGGAGGCGGCGAGGGTGCCTACAGAGTATTGGGAGCAGATGTTGCCAAAGAAGCTACCTACACCGTCCTCTGCACCGTCTAAAGGGACGAATT
CTGTGGCCTCTTCGAATTTTAAAACTGTGAAGGTTGATGGGAACCTGCCCGCCAAAGGTGGGAAGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCCTTCCATTCCTTCTCAAAACCCTCCTCCTTCCTTCCACACTTGCAACATCATGTTTCTTTCTTTCCGCCTTCGATTCATTTTCATCCTTCTTCTCGTTCTTGC
CCTCGCCTCCATGTCGTCGGAGGCGGCGAGGGTGCCTACAGAGTATTGGGAGCAGATGTTGCCAAAGAAGCTACCTACACCGTCCTCTGCACCGTCTAAAGGGACGAATT
CTGTGGCCTCTTCGAATTTTAAAACTGTGAAGGTTGATGGGAACCTGCCCGCCAAAGGTGGGAAGGTTTAA
Protein sequenceShow/hide protein sequence
MSPSIPSQNPPPSFHTCNIMFLSFRLRFIFILLLVLALASMSSEAARVPTEYWEQMLPKKLPTPSSAPSKGTNSVASSNFKTVKVDGNLPAKGGKV