; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh01G013190 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G013190
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptiontranscription factor JUNGBRUNNEN 1-like
Genome locationCma_Chr01:9410941..9411449
RNA-Seq ExpressionCmaCh01G013190
SyntenyCmaCh01G013190
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607984.1 Transcription factor JUNGBRUNNEN 1, partial [Cucurbita argyrosperma subsp. sororia]4.8e-4276.8Show/hide
Query:  EVWTLCRIFRRIPSIRKYSPIISPIPQNPNNNS-----FPTLIDLETKPNPSQQLNLFFPPKNSFFNPSLTLPYDSFEPSSLYPSSFWNGVDGGGGGGGR
        EVWTLCRIFRRIPSIRKYSPI+SPIPQNPNNNS     FPTLIDLETKP                 NPSLTLPY SFEPS LYPSSFWNG+DGGGGGGGR
Subjt:  EVWTLCRIFRRIPSIRKYSPIISPIPQNPNNNS-----FPTLIDLETKPNPSQQLNLFFPPKNSFFNPSLTLPYDSFEPSSLYPSSFWNGVDGGGGGGGR

Query:  DGGGGGGDVFTSGGWNELQLVVQIS
        DGGGGGGD+FTSGGW+ELQLVVQ+S
Subjt:  DGGGGGGDVFTSGGWNELQLVVQIS

KAG7037498.1 NAC domain-containing protein 73, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-2071.95Show/hide
Query:  DLETKPNPSQQLNLFFPPKNSFFNPSLTLPYDSFEPSSLYPSSFWNGVDGGGGGGGRDGGGGGGDVFTSGGWNELQLVVQIS
        DLETKP                 NPSLTLPY SFEPS LYPSSFWNG+DGGGGGGGRDGGGGGGD+FTSGGW+ELQLVVQ+S
Subjt:  DLETKPNPSQQLNLFFPPKNSFFNPSLTLPYDSFEPSSLYPSSFWNGVDGGGGGGGRDGGGGGGDVFTSGGWNELQLVVQIS

XP_022981711.1 transcription factor JUNGBRUNNEN 1-like [Cucurbita maxima]6.5e-4784.3Show/hide
Query:  QEVWTLCRIFRRIPSIRKYSPIISPIPQNPNNNSFPTLIDLETKPNPSQQLNLFFPPKNSFFNPSLTLPYDSFEPSSLYPSSFWNGVDGGGGGGGRDGGG
        +EVWTLCRIFRRIPSIRKYSPIISPIPQNPNNNSFPTLIDLETKP                 NPSLTLPYDSFEPSSLYPSSFWNGVDGGGGGGGRDGGG
Subjt:  QEVWTLCRIFRRIPSIRKYSPIISPIPQNPNNNSFPTLIDLETKPNPSQQLNLFFPPKNSFFNPSLTLPYDSFEPSSLYPSSFWNGVDGGGGGGGRDGGG

Query:  GGGDVFTSGGWNELQLVVQIS
        GGGDVFTSGGWNELQLVVQ+S
Subjt:  GGGDVFTSGGWNELQLVVQIS

XP_023523438.1 transcription factor JUNGBRUNNEN 1-like [Cucurbita pepo subsp. pepo]3.6e-3774.4Show/hide
Query:  EVWTLCRIFRRIPSIRKYSPIISPIPQNPNNNS-----FPTLIDLETKPNPSQQLNLFFPPKNSFFNPSLTLPYDSFEPSSLYPSSFWNGVDGGGGGGGR
        EVWTLCRIFRRIPSIRKYSPI+SPIPQNPNNNS     FPTLIDLETKP                 NPSLTLPY SFEPSSLYPSSFWNGVDGGG  G  
Subjt:  EVWTLCRIFRRIPSIRKYSPIISPIPQNPNNNS-----FPTLIDLETKPNPSQQLNLFFPPKNSFFNPSLTLPYDSFEPSSLYPSSFWNGVDGGGGGGGR

Query:  DGGGGGGDVFTSGGWNELQLVVQIS
         GGGGGGDV TSGGW+ELQLVVQ+S
Subjt:  DGGGGGGDVFTSGGWNELQLVVQIS

XP_038899483.1 transcription factor JUNGBRUNNEN 1 isoform X1 [Benincasa hispida]1.3e-1545.45Show/hide
Query:  EVWTLCRIFRRIPSIRKYSPI------------------ISPIPQNPNN-----NSFPT-----------LIDLETKPNPSQQLNLFFPPKNSFFNPSLT
        EVWTLCRIF+RIPS +KY P                   +S IPQNPNN     NS P            LI LETKP PS                +LT
Subjt:  EVWTLCRIFRRIPSIRKYSPI------------------ISPIPQNPNN-----NSFPT-----------LIDLETKPNPSQQLNLFFPPKNSFFNPSLT

Query:  LPY-DSFEPSSLYPSSFWNGVDGGGGGGGRDGGGGGGDVFT-SGGWNELQLVVQ
         PY  SFEPSS+ PSSFWNGV         DGGGGG D FT  GGW+EL+ +VQ
Subjt:  LPY-DSFEPSSLYPSSFWNGVDGGGGGGGRDGGGGGGDVFT-SGGWNELQLVVQ

TrEMBL top hitse value%identityAlignment
A0A0A0L479 NAC domain-containing protein7.8e-1441.33Show/hide
Query:  EVWTLCRIFRRIPSIRKYSPIIS---------PIPQNPNNNSF-------------------PTLIDLETKPNPSQQLNLFFPPKNSFFNPSLTLP--YD
        EVWTLCRI +RIPS +KY P +          P PQNPNN++                      LI LETKP P +QL           NP+LTLP    
Subjt:  EVWTLCRIFRRIPSIRKYSPIIS---------PIPQNPNNNSF-------------------PTLIDLETKPNPSQQLNLFFPPKNSFFNPSLTLP--YD

Query:  SFEPSSLYPSSFWNGVDGGGGGGGRDGGGGGGDVFTSGGWNELQLVVQIS
        SFE S +  SSFWNGV+G       +GGG   +  T+GGW+EL+ VVQ +
Subjt:  SFEPSSLYPSSFWNGVDGGGGGGGRDGGGGGGDVFTSGGWNELQLVVQIS

A0A1S3CTC4 transcription factor JUNGBRUNNEN 1-like isoform X13.9e-1341.45Show/hide
Query:  EVWTLCRIFRRIPSIRKYSPIIS---------PIPQNPNNN-------------SFPTLIDL-------ETKPNPSQQLNLFFPPKNSFFNPSLTLP---
        EVWTLCRIF+RIPS +KY P  +         P PQNPNN+             S P   D+       ETKP P +QL           NP+LTLP   
Subjt:  EVWTLCRIFRRIPSIRKYSPIIS---------PIPQNPNNN-------------SFPTLIDL-------ETKPNPSQQLNLFFPPKNSFFNPSLTLP---

Query:  YDSFEPSSLYPSSFWNGVDGGGGGGGRDGGGGGGDVFTSGGWNELQLVVQIS
          SFE S +  SS WNGV+G        GGGG  +  TSGGW+EL+ +VQ +
Subjt:  YDSFEPSSLYPSSFWNGVDGGGGGGGRDGGGGGGDVFTSGGWNELQLVVQIS

A0A6J1C187 transcription factor JUNGBRUNNEN 11.4e-1546.41Show/hide
Query:  EVWTLCRIFRRIPSIRKYSP------------IISPIP------QNPNNNS-------------FPTLIDLETKPNP-SQQLNLFFPPKNSFFNPSLTLP
        EVWTLCRIFRR+PS RKY+P            I +PIP      QNPN +S             F T +  ETKPNP SQQLN+        FNP+L L 
Subjt:  EVWTLCRIFRRIPSIRKYSP------------IISPIP------QNPNNNS-------------FPTLIDLETKPNP-SQQLNLFFPPKNSFFNPSLTLP

Query:  YDSF-EPSSLYPSSFWNGVDGGGGGGGRDGGGGGGDVFTSGGWNELQLVVQIS
        +  F EPSS YPSSF N VD   G  GRD      D+FT+ GW+EL+ VVQ +
Subjt:  YDSF-EPSSLYPSSFWNGVDGGGGGGGRDGGGGGGDVFTSGGWNELQLVVQIS

A0A6J1IXB3 transcription factor JUNGBRUNNEN 1-like3.1e-4784.3Show/hide
Query:  QEVWTLCRIFRRIPSIRKYSPIISPIPQNPNNNSFPTLIDLETKPNPSQQLNLFFPPKNSFFNPSLTLPYDSFEPSSLYPSSFWNGVDGGGGGGGRDGGG
        +EVWTLCRIFRRIPSIRKYSPIISPIPQNPNNNSFPTLIDLETKP                 NPSLTLPYDSFEPSSLYPSSFWNGVDGGGGGGGRDGGG
Subjt:  QEVWTLCRIFRRIPSIRKYSPIISPIPQNPNNNSFPTLIDLETKPNPSQQLNLFFPPKNSFFNPSLTLPYDSFEPSSLYPSSFWNGVDGGGGGGGRDGGG

Query:  GGGDVFTSGGWNELQLVVQIS
        GGGDVFTSGGWNELQLVVQ+S
Subjt:  GGGDVFTSGGWNELQLVVQIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGAGGTTTGGACCTTATGTAGAATCTTCAGAAGAATCCCATCAATTAGAAAGTACAGTCCAATAATATCTCCCATACCCCAAAACCCTAATAATAACTCCTTTCC
AACTCTAATAGACCTTGAAACTAAGCCAAACCCTTCTCAACAGCTCAACCTCTTCTTCCCCCCAAAAAATAGCTTCTTTAACCCTAGCTTAACCCTACCCTATGATTCCT
TTGAACCCTCTTCTTTGTACCCGTCGAGCTTTTGGAACGGCGTTGATGGTGGAGGAGGCGGTGGAGGTCGGGATGGAGGAGGAGGAGGAGGCGATGTCTTCACTAGTGGA
GGTTGGAACGAGTTGCAACTTGTTGTTCAGATTTCGTGTATATTTAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGGAGGTTTGGACCTTATGTAGAATCTTCAGAAGAATCCCATCAATTAGAAAGTACAGTCCAATAATATCTCCCATACCCCAAAACCCTAATAATAACTCCTTTCC
AACTCTAATAGACCTTGAAACTAAGCCAAACCCTTCTCAACAGCTCAACCTCTTCTTCCCCCCAAAAAATAGCTTCTTTAACCCTAGCTTAACCCTACCCTATGATTCCT
TTGAACCCTCTTCTTTGTACCCGTCGAGCTTTTGGAACGGCGTTGATGGTGGAGGAGGCGGTGGAGGTCGGGATGGAGGAGGAGGAGGAGGCGATGTCTTCACTAGTGGA
GGTTGGAACGAGTTGCAACTTGTTGTTCAGATTTCGTGTATATTTAGGTAG
Protein sequenceShow/hide protein sequence
MQEVWTLCRIFRRIPSIRKYSPIISPIPQNPNNNSFPTLIDLETKPNPSQQLNLFFPPKNSFFNPSLTLPYDSFEPSSLYPSSFWNGVDGGGGGGGRDGGGGGGDVFTSG
GWNELQLVVQISCIFR