; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh01G013230 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G013230
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionTubby-like F-box protein
Genome locationCma_Chr01:9436188..9436769
RNA-Seq ExpressionCmaCh01G013230
SyntenyCmaCh01G013230
Gene Ontology termsNA
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607987.1 hypothetical protein SDJN03_01329, partial [Cucurbita argyrosperma subsp. sororia]1.1e-9898.43Show/hide
Query:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
        MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
Subjt:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI

Query:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAA
        VECKPSD  EWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGC EFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAA
Subjt:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAA

KAG7037505.1 hypothetical protein SDJN02_01132, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-9898.43Show/hide
Query:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
        MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
Subjt:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI

Query:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAA
        VECKPSD  EWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGC EFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAA
Subjt:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAA

XP_022940745.1 uncharacterized protein LOC111446248 [Cucurbita moschata]1.0e-9998.45Show/hide
Query:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
        MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
Subjt:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI

Query:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAER
        VECKPSD AEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGC EFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSF APSAAAER
Subjt:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAER

XP_022981712.1 uncharacterized protein LOC111480776 [Cucurbita maxima]1.1e-101100Show/hide
Query:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
        MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
Subjt:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI

Query:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAER
        VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAER
Subjt:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAER

XP_023523437.1 uncharacterized protein LOC111787650 [Cucurbita pepo subsp. pepo]7.2e-9896.89Show/hide
Query:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
        MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVAS AGVRLLI
Subjt:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI

Query:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAER
        VECKPSD AEWRRRLESRGADDR NWHKPSTWREIEMLLESYGGC EFDVGDVPRLVVDTTAPV+FDEIVSTVIDFIVSNGGS TAPSAAAER
Subjt:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAER

TrEMBL top hitse value%identityAlignment
A0A0A0L485 Uncharacterized protein4.7e-8785.71Show/hide
Query:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
        M+IAMKGHPGTGKSTLAQ +ASLLK PLIDKDDVKDCAA LAAA+TA+LVNDLSYDVV+RLASTQLRLGLSV+VDTPLS RSH C L DVAS +G R+LI
Subjt:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI

Query:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSA
        VEC+PSDL EWRRRLESRG DD+TNWHKPSTWR+IEMLLESYGGC EFDVGDVPRLVVDTTAPV FDEIVSTV+DFIVSNGGSF AP A
Subjt:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSA

A0A5A7SP11 Uncharacterized protein7.3e-8886.84Show/hide
Query:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
        M+IAMKGHPGTGKSTLAQ +ASLLKIPLIDKDDVKDCAA LAAA+TA LVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRRSH C L DVAS +G R+LI
Subjt:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI

Query:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA
        VEC+PSDL  WRRRLESRG DDRTNWHKPSTWREIEMLLESYGGC EFDVGDVPRLVVDTTAPV FDEIVSTV+DFIVSNGGSF AP  A
Subjt:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA

A0A5D3CDQ4 Uncharacterized protein2.4e-8687.1Show/hide
Query:  MKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLIVECK
        MKGHPGTGKSTLAQ +ASLLKIPLIDKDDVKDCAA LAAA+TA LVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRRSH C L DVAS +G R+LIVEC+
Subjt:  MKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLIVECK

Query:  PSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA
        PSDL  WRRRLESRG DDRTNWHKPSTWREIEMLLESYGGC EFDVGDVPRLVVDTTAPV FDEIVSTV+DFIVSNGGSF AP  A
Subjt:  PSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAA

A0A6J1FRG5 uncharacterized protein LOC1114462484.9e-10098.45Show/hide
Query:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
        MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
Subjt:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI

Query:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAER
        VECKPSD AEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGC EFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSF APSAAAER
Subjt:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAER

A0A6J1IUR8 uncharacterized protein LOC1114807765.2e-102100Show/hide
Query:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
        MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
Subjt:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI

Query:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAER
        VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAER
Subjt:  VECKPSDLAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAATAGCGATGAAAGGCCATCCAGGCACGGGCAAGAGCACTCTGGCCCAAACCCTAGCCTCCCTCCTCAAAATCCCCCTAATCGATAAAGACGACGTCAAGGACTG
CGCCGCCGCTCTCGCCGCCGCATCAACCGCCGCCCTCGTCAACGACCTCTCCTACGACGTTGTTTACCGTCTCGCCTCGACGCAGCTCCGCCTCGGCCTCAGCGTCATCG
TCGACACGCCTCTCTCCCGCCGATCTCACTTTTGCCATCTTACCGATGTCGCTTCCACCGCCGGCGTGCGGCTTCTCATCGTCGAGTGTAAGCCATCTGATCTGGCGGAG
TGGAGGCGGAGGCTTGAGAGTCGCGGCGCTGATGATCGGACGAATTGGCACAAGCCGTCCACGTGGCGAGAAATCGAGATGCTCTTGGAAAGTTACGGCGGATGTGCCGA
ATTCGACGTCGGAGATGTTCCGAGGCTGGTGGTTGATACTACCGCGCCGGTTAGTTTTGATGAGATTGTTTCTACTGTGATCGATTTCATTGTATCTAACGGTGGTTCTT
TCACTGCTCCGTCGGCGGCGGCGGAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAATAGCGATGAAAGGCCATCCAGGCACGGGCAAGAGCACTCTGGCCCAAACCCTAGCCTCCCTCCTCAAAATCCCCCTAATCGATAAAGACGACGTCAAGGACTG
CGCCGCCGCTCTCGCCGCCGCATCAACCGCCGCCCTCGTCAACGACCTCTCCTACGACGTTGTTTACCGTCTCGCCTCGACGCAGCTCCGCCTCGGCCTCAGCGTCATCG
TCGACACGCCTCTCTCCCGCCGATCTCACTTTTGCCATCTTACCGATGTCGCTTCCACCGCCGGCGTGCGGCTTCTCATCGTCGAGTGTAAGCCATCTGATCTGGCGGAG
TGGAGGCGGAGGCTTGAGAGTCGCGGCGCTGATGATCGGACGAATTGGCACAAGCCGTCCACGTGGCGAGAAATCGAGATGCTCTTGGAAAGTTACGGCGGATGTGCCGA
ATTCGACGTCGGAGATGTTCCGAGGCTGGTGGTTGATACTACCGCGCCGGTTAGTTTTGATGAGATTGTTTCTACTGTGATCGATTTCATTGTATCTAACGGTGGTTCTT
TCACTGCTCCGTCGGCGGCGGCGGAGAGATGA
Protein sequenceShow/hide protein sequence
MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLIVECKPSDLAE
WRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCAEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFTAPSAAAER