; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh01G013960 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G013960
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr01:9884123..9886541
RNA-Seq ExpressionCmaCh01G013960
SyntenyCmaCh01G013960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608059.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-8998.81Show/hide
Query:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        MTQSPDFGGDYTDGTHH QSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEV+RCTKYEVKIRALQPSSSHEFDPSVI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
XP_022135315.1 uncharacterized protein At4g08330, chloroplastic [Momordica charantia]2.8e-7486.31Show/hide
Query:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        M QSP  G DY DGTH   SFS+ SLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVD+SRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
        FRRR KLLCRKCGNHIGNA+TS   S PLVSDGSDSSLP EV+RC KYEVKIRALQPSSSH+F P VI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
XP_022940003.1 uncharacterized protein At4g08330, chloroplastic [Cucurbita moschata]1.6e-8897.62Show/hide
Query:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKC NHIGNA+TSHTFSTPLVSDGSDSS PSEV+RCTKYEVKIRALQPSSSHEFDPSVI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
XP_022981061.1 uncharacterized protein At4g08330, chloroplastic [Cucurbita maxima]4.4e-91100Show/hide
Query:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
XP_023523702.1 uncharacterized protein At4g08330, chloroplastic [Cucurbita pepo subsp. pepo]1.1e-8998.21Show/hide
Query:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        MTQSPDFGGDYTDGTHHVQSFSSTSLYS+SSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKCGNHIGNANTSH+FSTPLVSDGSDSSLPSEV+RCTKYEVKIRALQPSSSHEFDPSVI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
TrEMBL top hitse value%identityAlignment
A0A0A0L375 Uncharacterized protein1.2e-7384.62Show/hide
Query:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        M QSP FG DY  GT HVQSFSS SL+ SSSRRDVYYSCGACGYELNLSS NRNTSTIGSKYGKSIKRGIISFLN+D+SRFTQVDELQCVPHFSK+SWGL
Subjt:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSD-SSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKCGN+IGNA+++HT S+PLVSDGSD SSLP+EV+RC KYEVKIRALQPSSS+EF+PS+I
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSD-SSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
A0A5D3D741 Uncharacterized protein1.5e-7384.02Show/hide
Query:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        M QSP FG DY  GT H+QSFSS SL+ SSSRRDVYYSCGACGYELNLSS NRNTSTIGSKYGKSIKRGIISFLN+D+SRFTQVDELQCVPHFSK+SWGL
Subjt:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSD-SSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKCGN+IGNA+++HT S+PLVSDGSD SSLP+EV+RC KYEVKIRALQPSSS+EF+PS+I
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSD-SSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
A0A6J1C0S6 uncharacterized protein At4g08330, chloroplastic1.4e-7486.31Show/hide
Query:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        M QSP  G DY DGTH   SFS+ SLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVD+SRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
        FRRR KLLCRKCGNHIGNA+TS   S PLVSDGSDSSLP EV+RC KYEVKIRALQPSSSH+F P VI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
A0A6J1FN39 uncharacterized protein At4g08330, chloroplastic7.5e-8997.62Show/hide
Query:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKC NHIGNA+TSHTFSTPLVSDGSDSS PSEV+RCTKYEVKIRALQPSSSHEFDPSVI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
A0A6J1IVF4 uncharacterized protein At4g08330, chloroplastic2.1e-91100Show/hide
Query:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI
SwissProt top hitse value%identityAlignment
Q9STN5 Uncharacterized protein At4g08330, chloroplastic1.1e-4460.53Show/hide
Query:  GDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGLFRRRIKLL
        G +     +  SFSS+S  SSSS R V YSCG+CGYELNLSS+NR TSTIGSKYGKS+K GIISF N+D+ RF+QVDE QC+PHFS++SWGLFR R KLL
Subjt:  GDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGLFRRRIKLL

Query:  CRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSS
        CRKC N+IGNA+        LV+  SD + P  +   TKY+++IR+LQPSS+
Subjt:  CRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSS
Arabidopsis top hitse value%identityAlignment
AT4G08330.1 unknown protein7.8e-4660.53Show/hide
Query:  GDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGLFRRRIKLL
        G +     +  SFSS+S  SSSS R V YSCG+CGYELNLSS+NR TSTIGSKYGKS+K GIISF N+D+ RF+QVDE QC+PHFS++SWGLFR R KLL
Subjt:  GDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGLFRRRIKLL

Query:  CRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSS
        CRKC N+IGNA+        LV+  SD + P  +   TKY+++IR+LQPSS+
Subjt:  CRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSS
AT4G08330.2 unknown protein.1.9e-3653.95Show/hide
Query:  GDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGLFRRRIKLL
        G +     +  SFSS+S  SSSS R V           N SS+NR TSTIGSKYGKS+K GIISF N+D+ RF+QVDE QC+PHFS++SWGLFR R KLL
Subjt:  GDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGLFRRRIKLL

Query:  CRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSS
        CRKC N+IGNA+        LV+  SD + P  +   TKY+++IR+LQPSS+
Subjt:  CRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCAGTCGCCGGATTTCGGAGGCGATTACACCGACGGAACTCACCACGTACAGTCCTTTTCGTCGACCTCTCTCTACTCTTCTTCGTCTCGCCGAGATGTT
TATTACAGCTGTGGTGCTTGTGGATATGAACTGAACTTGAGCTCTTCTAACCGCAATACATCGACCATCGGCTCTAAGTATGGTAAGTCGATAAAGCGAGGGATC
ATATCGTTTCTAAATGTCGACGATAGCAGATTTACTCAGGTTGATGAACTTCAGTGTGTGCCTCATTTCTCGAAGCACTCGTGGGGCCTATTTCGTCGAAGAATC
AAGCTACTATGTCGAAAGTGTGGAAACCATATTGGAAATGCTAACACAAGCCACACTTTCTCCACCCCACTTGTTTCAGATGGATCAGATTCATCTTTGCCCAGT
GAAGTCAATAGGTGTACGAAATATGAAGTTAAAATCCGTGCCTTACAACCCTCATCTTCACACGAATTTGACCCTTCAGTTATTTAA
mRNA sequenceShow/hide mRNA sequence
GTTCTTCCAATTCACCACACTTCGTCTCTTAGAAACTGCGATTTTTCTCTTAGGTCATATCTTCTGTTATTGTTTCGAGTTCGCTAAGATTAACTCCGAACTTGT
TCATTATTGTTTTTTGTAACCGCGATTCGTCGTTTACCACCTCGAAATCTCCGTCGACCGTTGCAGCCGGCGTCGGAGTCAGTGTCGTATTCTGAACCGGAGGAA
TGACGCAGTCGCCGGATTTCGGAGGCGATTACACCGACGGAACTCACCACGTACAGTCCTTTTCGTCGACCTCTCTCTACTCTTCTTCGTCTCGCCGAGATGTTT
ATTACAGCTGTGGTGCTTGTGGATATGAACTGAACTTGAGCTCTTCTAACCGCAATACATCGACCATCGGCTCTAAGTATGGTAAGTCGATAAAGCGAGGGATCA
TATCGTTTCTAAATGTCGACGATAGCAGATTTACTCAGGTTGATGAACTTCAGTGTGTGCCTCATTTCTCGAAGCACTCGTGGGGCCTATTTCGTCGAAGAATCA
AGCTACTATGTCGAAAGTGTGGAAACCATATTGGAAATGCTAACACAAGCCACACTTTCTCCACCCCACTTGTTTCAGATGGATCAGATTCATCTTTGCCCAGTG
AAGTCAATAGGTGTACGAAATATGAAGTTAAAATCCGTGCCTTACAACCCTCATCTTCACACGAATTTGACCCTTCAGTTATTTAAACAACGGGACAAGGCTTTA
CTGAATGGGTCCTCCTCCGAGTGTGCTATTTACTTGTGAATAAGAATTGGGTCTGAAATGGAAGCAAGTGTAATGGAAAGGATTCACAGCTATTGTTCCTGCCAA
CTAAAGGATGATTTATACGAGGGAGTTGTTTCGAAGCTACTGATGTTTTTGGTTTGTTTTTCGTTTTGCAACAAAGCATTGTTTAATGTGGCTTTATCGAAGTAA
CAAATTTAGTCTTCAAATTCTCTAGTTTGTATTTATTTGATTTCTAAGTTTTAAAACGTGTCTATAATAGTTATTTGAACTTTGAAATTTCATATTCAAAACTTA
TATAAGACTGACTCCATTAG
Protein sequenceShow/hide protein sequence
MTQSPDFGGDYTDGTHHVQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGLFRRRI
KLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVNRCTKYEVKIRALQPSSSHEFDPSVI