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CmaCh01G014000 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G014000
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionsmall glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2
Genome locationCma_Chr01:9897385..9903684
RNA-Seq ExpressionCmaCh01G014000
SyntenyCmaCh01G014000
Gene Ontology termsGO:0006620 - posttranslational protein targeting to endoplasmic reticulum membrane (biological process)
GO:0030433 - ubiquitin-dependent ERAD pathway (biological process)
GO:0016020 - membrane (cellular component)
GO:0072380 - TRC complex (cellular component)
GO:0060090 - molecular adaptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608061.1 Small glutamine-rich tetratricopeptide repeat-containing protein beta, partial [Cucurbita argyrosperma subsp. sororia]1.3e-7191.14Show/hide
Query:  KILQLRPFQVPSPAFASELHSTKFSGGAELSLTVFRRFAPSYHVRLPMANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPA
        ++LQLRPFQVPSP FAS+LHS +FSGGAELSL VFRRFA SYHVRLPMAN+RTDSPVACRIV AFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPA
Subjt:  KILQLRPFQVPSPAFASELHSTKFSGGAELSLTVFRRFAPSYHVRLPMANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPA

Query:  AEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDSGANLSKSSRPQ
        A ELAEFNSLV IFSSP SFQRSGTNSSVDNG VPMEHCSSLNVNDSGANLSKSSRPQ
Subjt:  AEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDSGANLSKSSRPQ
KAG7031691.1 Small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita argyrosperma subsp. argyrosperma]1.5e-7291.77Show/hide
Query:  KILQLRPFQVPSPAFASELHSTKFSGGAELSLTVFRRFAPSYHVRLPMANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPA
        ++LQLRPFQVPSP FAS+LHS +FSGGAELSL VFRRFAPSYHVRLPMAN+RTDSPVACRIV AFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPA
Subjt:  KILQLRPFQVPSPAFASELHSTKFSGGAELSLTVFRRFAPSYHVRLPMANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPA

Query:  AEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDSGANLSKSSRPQ
        A ELAEFNSLV IFSSP SFQRSGTNSSVDNG VPMEHCSSLNVNDSGANLSKSSRPQ
Subjt:  AEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDSGANLSKSSRPQ
XP_022980997.1 small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X1 [Cucurbita maxima]1.6e-53100Show/hide
Query:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS
        MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS
Subjt:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS

Query:  GANLSKSSRPQ
        GANLSKSSRPQ
Subjt:  GANLSKSSRPQ
XP_022980999.1 small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 [Cucurbita maxima]1.6e-53100Show/hide
Query:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS
        MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS
Subjt:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS

Query:  GANLSKSSRPQ
        GANLSKSSRPQ
Subjt:  GANLSKSSRPQ
XP_023525254.1 small glutamine-rich tetratricopeptide repeat-containing protein 2 [Cucurbita pepo subsp. pepo]3.3e-5195.5Show/hide
Query:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS
        MAN+RTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIE+AKQCLEQVFKVQSPAA+ELAEFNSLVDIFSSP SFQRSGTNSSVDNG VPMEHCSSLNVNDS
Subjt:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS

Query:  GANLSKSSRPQ
        GANLSKSSRPQ
Subjt:  GANLSKSSRPQ
TrEMBL top hitse value%identityAlignment
A0A6J1C318 small glutamine-rich tetratricopeptide repeat-containing protein 29.8e-4179.28Show/hide
Query:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS
        MAN+RTDSPVACRIVRAFLDFLNSVEPGPGVDVEG+EVAKQCLEQVFKV+SPA++EL EF+SLVDIFSSP SFQR  TNS VDNG +PM+H   LN+N+S
Subjt:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS

Query:  GANLSKSSRPQ
         ANLSKS + Q
Subjt:  GANLSKSSRPQ
A0A6J1FK29 small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X12.0e-4994.59Show/hide
Query:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS
        MAN+RTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAA ELAEFNSLV IFSS  SFQRSGTNSSVDNG VPMEHCSSLNVNDS
Subjt:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS

Query:  GANLSKSSRPQ
        GANLSKSSRPQ
Subjt:  GANLSKSSRPQ
A0A6J1FR00 small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X22.0e-4994.59Show/hide
Query:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS
        MAN+RTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAA ELAEFNSLV IFSS  SFQRSGTNSSVDNG VPMEHCSSLNVNDS
Subjt:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS

Query:  GANLSKSSRPQ
        GANLSKSSRPQ
Subjt:  GANLSKSSRPQ
A0A6J1ISS6 small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X17.8e-54100Show/hide
Query:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS
        MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS
Subjt:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS

Query:  GANLSKSSRPQ
        GANLSKSSRPQ
Subjt:  GANLSKSSRPQ
A0A6J1J0T2 small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X27.8e-54100Show/hide
Query:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS
        MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS
Subjt:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDS

Query:  GANLSKSSRPQ
        GANLSKSSRPQ
Subjt:  GANLSKSSRPQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G08320.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.5e-1247.95Show/hide
Query:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFN----SLVDIFSS
        MA + TDSP+  +IVR+FL+FL+SVE  PGVD EG+EVA++CL + FK+ S ++ +  + +    SLV++F+S
Subjt:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFN----SLVDIFSS
AT4G08320.2 Tetratricopeptide repeat (TPR)-like superfamily protein2.5e-1247.95Show/hide
Query:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFN----SLVDIFSS
        MA + TDSP+  +IVR+FL+FL+SVE  PGVD EG+EVA++CL + FK+ S ++ +  + +    SLV++F+S
Subjt:  MANMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFN----SLVDIFSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACAAGACGAATGCAAACCAAACACCAAGATGCTATAAAACAGGAAGTTCTGAACTTCGATGATTCTGAATATGTTTCCTTTATTCTCTTTGAAGAGTTGTTGGA
AGTATCAAATACGAGCATTTGCTGTCTTGAGGACCAGCAGAAGGTTGCCACTACTGAGCTTCTCAACTCCCTCAAGATTCTGCAACTCCGACCATTCCAAGTCCCATCGC
CGGCTTTTGCCTCAGAGCTCCATTCTACTAAGTTTTCAGGCGGAGCCGAGCTCTCGTTAACTGTGTTCAGACGGTTCGCGCCTTCTTATCATGTGCGCTTGCCCATGGCT
AACATGAGGACCGACTCTCCCGTCGCTTGTCGCATCGTTCGTGCCTTTCTTGACTTTCTGAACTCTGTGGAGCCAGGTCCAGGTGTTGATGTTGAGGGCATTGAGGTAGC
AAAACAATGTTTAGAACAAGTGTTTAAAGTTCAGTCTCCTGCTGCCGAAGAGTTAGCGGAGTTCAATTCGCTAGTAGACATTTTTAGTTCACCGGGATCTTTTCAGCGTT
CTGGAACTAATTCATCTGTTGATAATGGAACCGTTCCGATGGAACATTGCAGTTCTCTCAATGTGAATGATTCTGGCGCCAATTTGTCAAAGTCATCAAGACCTCAGGAG
TATTGCAAGATGAACTTTTTGGGCAATTTGTTCTTGCACTTGAAAAACTTCGATATTTTAGGACCTCAGCAGATGGGAGGGATGATCCTGACCAACTCGAGCGAGCAACT
CGTTTGTTTCATGATGCTCTTGGAGAAATGGAAAGATCTGGATGCGCCGAAATTAATCACAAAAACCTGGCTGAGTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCACAAGACGAATGCAAACCAAACACCAAGATGCTATAAAACAGGAAGTTCTGAACTTCGATGATTCTGAATATGTTTCCTTTATTCTCTTTGAAGAGTTGTTGGA
AGTATCAAATACGAGCATTTGCTGTCTTGAGGACCAGCAGAAGGTTGCCACTACTGAGCTTCTCAACTCCCTCAAGATTCTGCAACTCCGACCATTCCAAGTCCCATCGC
CGGCTTTTGCCTCAGAGCTCCATTCTACTAAGTTTTCAGGCGGAGCCGAGCTCTCGTTAACTGTGTTCAGACGGTTCGCGCCTTCTTATCATGTGCGCTTGCCCATGGCT
AACATGAGGACCGACTCTCCCGTCGCTTGTCGCATCGTTCGTGCCTTTCTTGACTTTCTGAACTCTGTGGAGCCAGGTCCAGGTGTTGATGTTGAGGGCATTGAGGTAGC
AAAACAATGTTTAGAACAAGTGTTTAAAGTTCAGTCTCCTGCTGCCGAAGAGTTAGCGGAGTTCAATTCGCTAGTAGACATTTTTAGTTCACCGGGATCTTTTCAGCGTT
CTGGAACTAATTCATCTGTTGATAATGGAACCGTTCCGATGGAACATTGCAGTTCTCTCAATGTGAATGATTCTGGCGCCAATTTGTCAAAGTCATCAAGACCTCAGGAG
TATTGCAAGATGAACTTTTTGGGCAATTTGTTCTTGCACTTGAAAAACTTCGATATTTTAGGACCTCAGCAGATGGGAGGGATGATCCTGACCAACTCGAGCGAGCAACT
CGTTTGTTTCATGATGCTCTTGGAGAAATGGAAAGATCTGGATGCGCCGAAATTAATCACAAAAACCTGGCTGAGTCCTTGA
Protein sequenceShow/hide protein sequence
MITRRMQTKHQDAIKQEVLNFDDSEYVSFILFEELLEVSNTSICCLEDQQKVATTELLNSLKILQLRPFQVPSPAFASELHSTKFSGGAELSLTVFRRFAPSYHVRLPMA
NMRTDSPVACRIVRAFLDFLNSVEPGPGVDVEGIEVAKQCLEQVFKVQSPAAEELAEFNSLVDIFSSPGSFQRSGTNSSVDNGTVPMEHCSSLNVNDSGANLSKSSRPQE
YCKMNFLGNLFLHLKNFDILGPQQMGGMILTNSSEQLVCFMMLLEKWKDLDAPKLITKTWLSP