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CmaCh01G014510 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G014510
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionKH domain-containing protein
Genome locationCma_Chr01:10207824..10208919
RNA-Seq ExpressionCmaCh01G014510
SyntenyCmaCh01G014510
Gene Ontology termsGO:0005622 - intracellular (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR004088 - K Homology domain, type 1
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608107.1 KH domain-containing protein HEN4, partial [Cucurbita argyrosperma subsp. sororia]1.3e-7992.9Show/hide
Query:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP
        P+ RSRDRSFV+PNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLF VSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGS+E+IVVI GPNQETEVNP
Subjt:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP

Query:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEEAVAENRC
        EQN KEDKKNSEVEENGDDIAECKKKEDKDSPP ED KQKEVPHLQL KALFLVSEKFFDEE VAENRC
Subjt:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEEAVAENRC

KAG7031745.1 KH domain-containing protein HEN4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-7593.21Show/hide
Query:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP
        P+ RSRDRSFV+PNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLF VSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGS+E+IVVI GPNQETEVNP
Subjt:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP

Query:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEE
        EQN KEDKKNSEVEENGDDIAECKKKEDKDSPP ED KQKEVPHLQL KALFLVSEKFFDEE
Subjt:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEE

XP_004136236.1 KH domain-containing protein HEN4 [Cucumis sativus]1.1e-5775.9Show/hide
Query:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP
        P+ RSRDRS V+ NGKGKW K  G    +NQSFKLSPGYAVFRVLFPVSRI SL+G DGD LS+IREETGVEIRVE+T+ G DERI VIGG NQETEVNP
Subjt:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP

Query:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEEAVAE
        E+  KED KNSEVEEN  DIA+ KKKEDKDSPP EDAKQKEV H QL KALFLVSEK FDEE  A+
Subjt:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEEAVAE

XP_022159704.1 KH domain-containing protein HEN4-like [Momordica charantia]1.1e-5779.14Show/hide
Query:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP
        P+ RSRDR+FV+PNGKGKW K   GSRS+NQS KLSPGYAVFRVLFP SRIGSLIG DG+VLSQIREETGVE+RVE+ + G DERIVV+GG NQETEVNP
Subjt:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP

Query:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAK-QKEVPHLQLWKALFLVSEKFFDEE
        EQN KED KNSEVEEN  DIAE KKKEDKDS P EDAK +KEV +LQL KALFLVSEK FDEE
Subjt:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAK-QKEVPHLQLWKALFLVSEKFFDEE

XP_038896749.1 KH domain-containing protein HEN4-like [Benincasa hispida]7.6e-5977.71Show/hide
Query:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP
        P+ RSRDR+FV+ NGKGKW K   GSRSQN+SFKLSPGYAVFRVLFPVSRIGSL+G DGD LS+IREETGVEIRVE+TV G DER+VVIG   Q+TEVNP
Subjt:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP

Query:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEEAVAE
        EQ  KED KNSEVEEN  DIA+ K KEDKDSPP EDAKQKEV HLQL KALFLVSEK FDEE  A+
Subjt:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEEAVAE

TrEMBL top hitse value%identityAlignment
A0A0A0LJT9 Uncharacterized protein5.3e-5875.9Show/hide
Query:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP
        P+ RSRDRS V+ NGKGKW K  G    +NQSFKLSPGYAVFRVLFPVSRI SL+G DGD LS+IREETGVEIRVE+T+ G DERI VIGG NQETEVNP
Subjt:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP

Query:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEEAVAE
        E+  KED KNSEVEEN  DIA+ KKKEDKDSPP EDAKQKEV H QL KALFLVSEK FDEE  A+
Subjt:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEEAVAE

A0A1S3CRU9 KH domain-containing protein At4g18375-like1.0e-5674.7Show/hide
Query:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP
        P+ RSRDRS V+ NGKGKW K       +NQ FKLSPGYAVFRVLFPVSRI SL+G DGD LS+IREETGVEIRVE+T+ G DERI VIGG NQETEVNP
Subjt:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP

Query:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEEAVAE
        E+  KED KNSEVEEN  DIA+ KKKEDKDSPP EDAKQKEV H QL KALFLVSEK FDEE  A+
Subjt:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEEAVAE

A0A5A7T8U8 KH domain-containing protein1.0e-5674.7Show/hide
Query:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP
        P+ RSRDRS V+ NGKGKW K       +NQ FKLSPGYAVFRVLFPVSRI SL+G DGD LS+IREETGVEIRVE+T+ G DERI VIGG NQETEVNP
Subjt:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP

Query:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEEAVAE
        E+  KED KNSEVEEN  DIA+ KKKEDKDSPP EDAKQKEV H QL KALFLVSEK FDEE  A+
Subjt:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEEAVAE

A0A6J1E343 KH domain-containing protein HEN4-like5.3e-5879.14Show/hide
Query:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP
        P+ RSRDR+FV+PNGKGKW K   GSRS+NQS KLSPGYAVFRVLFP SRIGSLIG DG+VLSQIREETGVE+RVE+ + G DERIVV+GG NQETEVNP
Subjt:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP

Query:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAK-QKEVPHLQLWKALFLVSEKFFDEE
        EQN KED KNSEVEEN  DIAE KKKEDKDS P EDAK +KEV +LQL KALFLVSEK FDEE
Subjt:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAK-QKEVPHLQLWKALFLVSEKFFDEE

A0A6J1F912 KH domain-containing protein HEN4-like3.8e-5675.3Show/hide
Query:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP
        P+ RSRDR+ V+ NGKGKW K   GSRS  QSFKLSPGYAVFRVLFPVSRI SL+GGDGDVLS+I EETGVEIRVE+T+ G DERIVVIGG NQETEVNP
Subjt:  PATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNP

Query:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEEAVAE
        E+  KED KNSEVEEN  D AE  KKEDK S P E++KQKEVP+LQL KALFLVSEK FDEE  A+
Subjt:  EQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEKFFDEEAVAE

SwissProt top hitse value%identityAlignment
F4KDN0 KH domain-containing protein HEN44.1e-0739.02Show/hide
Query:  GYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIV-VIGGPNQETEV----NPEQNIKEDKKNSEVE
        G+A FR+L P+S +G++IG  G+V+ Q+++ TG +IRVEE   GS +R++ +I   + ++ V    N   N + +KK  EVE
Subjt:  GYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIV-VIGGPNQETEV----NPEQNIKEDKKNSEVE

Q9SR13 Flowering locus K homology domain1.7e-0538.24Show/hide
Query:  PGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQ-ETEVNPEQN
        PG  VFR+L P  ++GS+IG  GDV+ +I EET   I++ +   G+ ER V++ G  + E+ + P  +
Subjt:  PGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQ-ETEVNPEQN

Arabidopsis top hitse value%identityAlignment
AT5G15270.1 RNA-binding KH domain-containing protein3.1e-1039.78Show/hide
Query:  RSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQET
        RSR +S  + NG G   +  G  R    S  +     VFR L PV +IGS+IG  GD++ Q+R +T  +IR+ E + G DER++ I  P+ ET
Subjt:  RSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQET

AT5G15270.2 RNA-binding KH domain-containing protein3.1e-1039.78Show/hide
Query:  RSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQET
        RSR +S  + NG G   +  G  R    S  +     VFR L PV +IGS+IG  GD++ Q+R +T  +IR+ E + G DER++ I  P+ ET
Subjt:  RSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQET

AT5G64390.1 RNA-binding KH domain-containing protein2.9e-0839.02Show/hide
Query:  GYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIV-VIGGPNQETEV----NPEQNIKEDKKNSEVE
        G+A FR+L P+S +G++IG  G+V+ Q+++ TG +IRVEE   GS +R++ +I   + ++ V    N   N + +KK  EVE
Subjt:  GYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIV-VIGGPNQETEV----NPEQNIKEDKKNSEVE

AT5G64390.2 RNA-binding KH domain-containing protein2.9e-0839.02Show/hide
Query:  GYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIV-VIGGPNQETEV----NPEQNIKEDKKNSEVE
        G+A FR+L P+S +G++IG  G+V+ Q+++ TG +IRVEE   GS +R++ +I   + ++ V    N   N + +KK  EVE
Subjt:  GYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIV-VIGGPNQETEV----NPEQNIKEDKKNSEVE

AT5G64390.3 RNA-binding KH domain-containing protein2.9e-0839.02Show/hide
Query:  GYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIV-VIGGPNQETEV----NPEQNIKEDKKNSEVE
        G+A FR+L P+S +G++IG  G+V+ Q+++ TG +IRVEE   GS +R++ +I   + ++ V    N   N + +KK  EVE
Subjt:  GYAVFRVLFPVSRIGSLIGGDGDVLSQIREETGVEIRVEETVHGSDERIV-VIGGPNQETEV----NPEQNIKEDKKNSEVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTCTCGCTTTCTCTTCTGGAATTTCAAGTGCAAGGGATTTCGGTCATTTCTCCAACTCCTTTTGCACTGCTCGGAGCTCAATAACTGGACGGCATTTCCC
ACCGGAATTTCCATTGAAGGCCGTTTTCTTCGACCTGGAATCACTGAATACCCCCCTGCTACTAGATCACGTGATCGGAGCTTTGTCGAGCCGAATGGGAAAGGA
AAGTGGCACAAGCCATTAGGTGGTTCTCGTTCACAAAACCAATCCTTCAAACTCTCTCCTGGTTATGCTGTCTTTCGTGTCCTCTTTCCTGTTTCAAGAATTGGC
AGCCTAATAGGTGGAGATGGGGATGTTTTATCTCAAATTCGTGAAGAAACAGGTGTAGAAATCAGAGTAGAGGAAACTGTACATGGAAGTGATGAGAGAATAGTA
GTAATTGGAGGCCCTAATCAAGAAACTGAAGTGAACCCTGAGCAGAATATTAAGGAAGACAAGAAAAATTCTGAAGTCGAGGAGAACGGTGATGATATTGCTGAG
TGTAAAAAGAAAGAAGACAAAGATTCTCCTCCTTCGGAAGATGCTAAACAGAAGGAAGTTCCACATTTGCAATTGTGGAAGGCCCTCTTTCTTGTATCTGAGAAG
TTCTTCGACGAAGAAGCGGTGGCAGAAAACAGATGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCTCTCGCTTTCTCTTCTGGAATTTCAAGTGCAAGGGATTTCGGTCATTTCTCCAACTCCTTTTGCACTGCTCGGAGCTCAATAACTGGACGGCATTTCCC
ACCGGAATTTCCATTGAAGGCCGTTTTCTTCGACCTGGAATCACTGAATACCCCCCTGCTACTAGATCACGTGATCGGAGCTTTGTCGAGCCGAATGGGAAAGGA
AAGTGGCACAAGCCATTAGGTGGTTCTCGTTCACAAAACCAATCCTTCAAACTCTCTCCTGGTTATGCTGTCTTTCGTGTCCTCTTTCCTGTTTCAAGAATTGGC
AGCCTAATAGGTGGAGATGGGGATGTTTTATCTCAAATTCGTGAAGAAACAGGTGTAGAAATCAGAGTAGAGGAAACTGTACATGGAAGTGATGAGAGAATAGTA
GTAATTGGAGGCCCTAATCAAGAAACTGAAGTGAACCCTGAGCAGAATATTAAGGAAGACAAGAAAAATTCTGAAGTCGAGGAGAACGGTGATGATATTGCTGAG
TGTAAAAAGAAAGAAGACAAAGATTCTCCTCCTTCGGAAGATGCTAAACAGAAGGAAGTTCCACATTTGCAATTGTGGAAGGCCCTCTTTCTTGTATCTGAGAAG
TTCTTCGACGAAGAAGCGGTGGCAGAAAACAGATGCTGA
Protein sequenceShow/hide protein sequence
MTSRFLFWNFKCKGFRSFLQLLLHCSELNNWTAFPTGISIEGRFLRPGITEYPPATRSRDRSFVEPNGKGKWHKPLGGSRSQNQSFKLSPGYAVFRVLFPVSRIG
SLIGGDGDVLSQIREETGVEIRVEETVHGSDERIVVIGGPNQETEVNPEQNIKEDKKNSEVEENGDDIAECKKKEDKDSPPSEDAKQKEVPHLQLWKALFLVSEK
FFDEEAVAENRC