; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh01G016230 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G016230
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionpre-rRNA-processing protein TSR2 homolog
Genome locationCma_Chr01:11138044..11142883
RNA-Seq ExpressionCmaCh01G016230
SyntenyCmaCh01G016230
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR019398 - Pre-rRNA-processing protein TSR2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591676.1 Pre-rRNA-processing protein TSR2-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.3e-10964.6Show/hide
Query:  MANLHKSKSDYDDLRRRRCGCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKNSDSLSSSSSDSSSYYSSVSSCSSCSSPNRPYDKAT---------
        MAN H+SKSDYDD RR     CKRHPKH QSPGVCSLCL EKLSQI+S T SSRK SDSLSSS   S+SYYSS SSCSSCSSPN PY   T         
Subjt:  MANLHKSKSDYDDLRRRRCGCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKNSDSLSSSSSDSSSYYSSVSSCSSCSSPNRPYDKAT---------

Query:  ASSIYKKSRSLAFALRFRRGADSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRTSAVVQGNGSPISCNCSLNPIAAPISFTALNFIEGFTRGGGEME
        ASSI+KKSRS+AFA R RRG +SDSGK ++LG  S   +RP+           HS  SAV                 +  +   A  +           +
Subjt:  ASSIYKKSRSLAFALRFRRGADSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRTSAVVQGNGSPISCNCSLNPIAAPISFTALNFIEGFTRGGGEME

Query:  GGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIFMH
           NRLLPA A PLFQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDI TWFTQNKE LYIDDLEMILDE +LSLNTQVDDGSIEEVAE+LI MH
Subjt:  GGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIFMH

Query:  EECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGD--VGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRRSSR
        EEC+DGNFSSI +LRQSPLPR A SHVSQ MSD++EEE+E+D+++ GD  V NG    R DMMVDAIQ  P  VN QP PEA+A AEDGWVQVTSRR SR
Subjt:  EECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGD--VGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRRSSR

Query:  GTRN
        GTRN
Subjt:  GTRN

KAG6608259.1 Pre-rRNA-processing protein TSR2-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.3e-10592.51Show/hide
Query:  ISFTALNFIEGFTRGGGEMEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSL
        ISFTA+NFIEGFT  GGEM+GGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSL
Subjt:  ISFTALNFIEGFTRGGGEMEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSL

Query:  NTQVDDGSIEEVAEKLIFMHEECVDGNFSSIGRLRQSPLPR-GAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAI----QQQPRAVNQQ
        NTQVDDGSIEEVAEKLIFMHEECVDGNFSSI RLRQSPLPR GAHSHVSQAMSD +EEEEEDDDDDDG  GNGSDGMRNDMMVDAI    QQQPRAVNQ 
Subjt:  NTQVDDGSIEEVAEKLIFMHEECVDGNFSSIGRLRQSPLPR-GAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAI----QQQPRAVNQQ

Query:  PRPEASAPAEDGWVQVTSRRSSRGTRN
         RPEAS+PAEDGWVQVTSRRSSRGTRN
Subjt:  PRPEASAPAEDGWVQVTSRRSSRGTRN

XP_022940503.1 pre-rRNA-processing protein TSR2 homolog [Cucurbita moschata]1.9e-9793.69Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        M+G GNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAI--QQQPRAVNQQPRPEASAPAEDGWVQVTSRRS
        MHEECVDGNFSSI RLRQSPLPRGAHSHVSQAMSD+EEEEEEDDDDD    GNG DGMRNDMMVDAI  QQQPRAVNQ  RPEASAPAEDGWVQVTSRRS
Subjt:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAI--QQQPRAVNQQPRPEASAPAEDGWVQVTSRRS

Query:  SRGTRN
        SRGTRN
Subjt:  SRGTRN

XP_022982103.1 pre-rRNA-processing protein TSR2 homolog [Cucurbita maxima]1.6e-107100Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRRSSR
        MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRRSSR
Subjt:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRRSSR

Query:  GTRN
        GTRN
Subjt:  GTRN

XP_023524387.1 pre-rRNA-processing protein TSR2 homolog [Cucurbita pepo subsp. pepo]3.6e-9694.2Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAI---QQQPRAVNQQPRPEASAPAEDGWVQVTSRR
        MHEECVDGNFSSI RLRQSPL RGAHSHVSQAMSD+EEEE   DDDDDG  GNGSDGMRNDMMVDAI   QQQPRAVN QPRPEASAPAEDGWVQVTSRR
Subjt:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAI---QQQPRAVNQQPRPEASAPAEDGWVQVTSRR

Query:  SSRGTRN
        SSRGTRN
Subjt:  SSRGTRN

TrEMBL top hitse value%identityAlignment
A0A1S4E5H6 pre-rRNA-processing protein TSR21.5e-7679.51Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDIFTWF QNKE LYIDDLE ILDE MLSLNTQVDDGSIEEVAE+LIF
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQ-QQPRAVNQQPRPEASAPAEDGWVQVTSRRSS
        MHEECVD NFSSI RLRQSP P+ AH+HV+QA SD       DDDDDD +     D  RNDMMVDA+Q  Q R VN Q  PEA+A AEDGWVQVTSRR +
Subjt:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQ-QQPRAVNQQPRPEASAPAEDGWVQVTSRRSS

Query:  RGTRN
        RGTRN
Subjt:  RGTRN

A0A5D3E598 Pre-rRNA-processing protein TSR21.5e-7679.51Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDIFTWF QNKE LYIDDLE ILDE MLSLNTQVDDGSIEEVAE+LIF
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQ-QQPRAVNQQPRPEASAPAEDGWVQVTSRRSS
        MHEECVD NFSSI RLRQSP P+ AH+HV+QA SD       DDDDDD +     D  RNDMMVDA+Q  Q R VN Q  PEA+A AEDGWVQVTSRR +
Subjt:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQ-QQPRAVNQQPRPEASAPAEDGWVQVTSRRSS

Query:  RGTRN
        RGTRN
Subjt:  RGTRN

A0A6J1FPH6 pre-rRNA-processing protein TSR2 homolog9.3e-9893.69Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        M+G GNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAI--QQQPRAVNQQPRPEASAPAEDGWVQVTSRRS
        MHEECVDGNFSSI RLRQSPLPRGAHSHVSQAMSD+EEEEEEDDDDD    GNG DGMRNDMMVDAI  QQQPRAVNQ  RPEASAPAEDGWVQVTSRRS
Subjt:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAI--QQQPRAVNQQPRPEASAPAEDGWVQVTSRRS

Query:  SRGTRN
        SRGTRN
Subjt:  SRGTRN

A0A6J1IM14 pre-rRNA-processing protein TSR2 homolog1.5e-7680.88Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        MEGG NRLLPA A P FQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDI TWFTQNKE LYIDDLEMILDE +LSLNTQVDDGSIEEVAE+LI 
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRRSSR
        MHEEC+DGNFSSI +LRQSPLP+ A SHVSQ MSD+EEE+EE  +  D DVGNG    R DMMVDAI  QPR VN QP PEA+A AEDGWVQVTSRR SR
Subjt:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRRSSR

Query:  GTRN
        GTRN
Subjt:  GTRN

A0A6J1J400 pre-rRNA-processing protein TSR2 homolog7.6e-108100Show/hide
Query:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
Subjt:  MEGGGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRRSSR
        MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRRSSR
Subjt:  MHEECVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRRSSR

Query:  GTRN
        GTRN
Subjt:  GTRN

SwissProt top hitse value%identityAlignment
Q06672 Pre-rRNA-processing protein TSR21.6e-0625.3Show/hide
Query:  FQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETML-----SLNTQVDDGSIEEVAEKLIFMHEECVDGNFS
        F+ G+ +V+ +W AL +AV+N WGG DS  K + +   +   F   K    +D    +++ET+L        T V+D S   +A ++I ++ +C + N++
Subjt:  FQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETML-----SLNTQVDDGSIEEVAEKLIFMHEECVDGNFS

Query:  SIGRLR---QSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAV
         + +L    Q          V     D++E++E+ +D DD D     D   ++++ D +  +P  +
Subjt:  SIGRLR---QSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAV

Q3KPN2 Pre-rRNA-processing protein TSR2 homolog1.6e-0625.53Show/hide
Query:  DAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIFMHEECVDGNFS
        D+  LF+E    VL  W  LQ+AV+N +GG  S+ K E +   I  +F+ N +    +  + I+       +T V+DGS   VA++L  +  +C  G  +
Subjt:  DAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIFMHEECVDGNFS

Query:  SI-GRLRQSPLPR-GAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRR
        ++  ++ Q    +    + V +    ++EEE  DD+++  D  N         +  A+       +  P+ E   P +DGW  V  ++
Subjt:  SI-GRLRQSPLPR-GAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRR

Q3KRG3 Pre-rRNA-processing protein TSR2 homolog1.0e-0829.51Show/hide
Query:  LFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLS-LNTQVDDGSIEEVAEKLIFMHEECVDGNFSSIG
        +F E +  VL  W  LQ+AVDN +GG  S++K E +   +  +FT N + L  D++E  + E M +  +T VDDGS+ +VA+++  M ++C  G  + + 
Subjt:  LFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLS-LNTQVDDGSIEEVAEKLIFMHEECVDGNFSSIG

Query:  RLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRR
          R+  L        S        +  +DDDDDD +     +G      V +      AVN     E     +DGW  V  ++
Subjt:  RLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRR

Q3T090 Pre-rRNA-processing protein TSR2 homolog6.2e-0627.13Show/hide
Query:  DAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLS-LNTQVDDGSIEEVAEKLIFMHEECVDGNF
        D+  LF   +   L  W ALQ+AV+N +GG  S+ K E L   +  +F +N + L +D++E  L E M++  +T V+DGS+ +V+++L  M      G+ 
Subjt:  DAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLS-LNTQVDDGSIEEVAEKLIFMHEECVDGNF

Query:  SSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDD-DDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRR
        +++  +      R      +   +  E +E++D +  ++ +V   +DG   D +    Q +P   + Q   E     EDGW  V  ++
Subjt:  SSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDD-DDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRR

Q969E8 Pre-rRNA-processing protein TSR2 homolog2.5e-0728.57Show/hide
Query:  DAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLS-LNTQVDDGSIEEVAEKLIFMHEECVDGNF
        DA  LF+ G+   L  W ALQ+AV+N +GG  S+ K + L   +  +F +N + L +D++E  L E + +  +T V+DGS+ +V+++L  M      G+ 
Subjt:  DAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLS-LNTQVDDGSIEEVAEKLIFMHEECVDGNF

Query:  SSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDD--DDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRR
        +++  +      R      +   +  E +E+EDD D  ++ +V   +DG   D +    Q +P   + Q   E     EDGW  V  ++
Subjt:  SSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDD--DDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRR

Arabidopsis top hitse value%identityAlignment
AT1G22470.1 unknown protein2.0e-0751.32Show/hide
Query:  CKRHPKHRQSPGVCSLCLTEKLSQILS---------ATTSSRKNSDSLSSSSSDS---------SSYYSSVSSCSS
        CK+HPKHRQSPG+CSLCL E LS++ S         +++S  K   S SS+SS+S         SSYYSSVSSC S
Subjt:  CKRHPKHRQSPGVCSLCLTEKLSQILS---------ATTSSRKNSDSLSSSSSDS---------SSYYSSVSSCSS

AT1G35210.1 unknown protein6.8e-0857.81Show/hide
Query:  CKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKNSDSLSSSSSDSSSYYSS--VSSCSSCSSP
        CK+HPKHRQSPGVCSLCL E+LS  + A +S R  S  + S+SS ++S  SS   SS SSC SP
Subjt:  CKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKNSDSLSSSSSDSSSYYSS--VSSCSSCSSP

AT1G72240.1 unknown protein1.3e-0654.93Show/hide
Query:  CKRHPKHRQSPGVCSLCLTEKLSQI---------LSATTSSRKNSDSLSSSSSDSSSYYSSVSSCSSCSSP
        CK+H KHRQSPG+CSLCLTE+LS++          +  T++   S S SSSSS SS Y  S SS SSCSSP
Subjt:  CKRHPKHRQSPGVCSLCLTEKLSQI---------LSATTSSRKNSDSLSSSSSDSSSYYSSVSSCSSCSSP

AT3G22510.1 Pre-rRNA-processing protein TSR2, conserved region1.2e-1744Show/hide
Query:  PADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDET-MLSLNTQVDDGSIEEVAEKLIFMHEECVDG
        P D   + Q  IG +LSRW  LQ+AV N+WGG DS +K + L  ++F   +Q+   + ++++E +L E+ +LS NT+++DGSIEEVAE+L+ +HEE + G
Subjt:  PADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDET-MLSLNTQVDDGSIEEVAEKLIFMHEECVDG

AT5G27990.1 Pre-rRNA-processing protein TSR2, conserved region1.4e-2637.5Show/hide
Query:  NRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLY-IDDLEMILDETMLSLNTQVDDGSIEEVAEKLIFMHEE
        N  L  +A  + +EGIGL+L RW+A++ AV+N WGGRDS+ K     + +F +F Q+K+ +  I+ L  +LD+ +  LNT  +DGS++EVA  L+ ++E+
Subjt:  NRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLY-IDDLEMILDETMLSLNTQVDDGSIEEVAEKLIFMHEE

Query:  CVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRRSSRGTRN
        C +GN+  +  LR +     A S V  +  D+EE ++EDDD               DMMVDA  Q+     Q+  P     A+DGW  V+SR+ ++G RN
Subjt:  CVDGNFSSIGRLRQSPLPRGAHSHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRRSSRGTRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACCTTCACAAATCCAAGTCCGATTACGATGATCTCCGCCGCCGCCGCTGCGGTTGCTGCAAACGGCATCCCAAGCACCGCCAATCTCCCGGCGTTTGC
TCCCTATGTTTGACAGAAAAGCTCTCGCAAATCCTCTCCGCGACTACTTCATCGCGTAAAAACTCCGATTCTCTTTCTTCTTCCTCCTCCGATTCCTCTTCTTAT
TACTCCTCTGTTTCCTCTTGTTCTTCCTGTTCTTCGCCGAATCGGCCTTACGATAAGGCTACAGCGTCTTCGATCTATAAGAAGAGTAGATCGTTGGCGTTTGCG
TTGCGATTTAGACGAGGAGCAGATAGCGATAGTGGAAAGAAGAGTCACCTAGGGTTTTGGTCGAGGTTTCTGAATCGGCCGAGACGGAAGAGAATGGAATTGGAG
GAGGCTTTGATGCACTCTAGAACAAGCGCCGTGGTGCAGGGGAACGGCTCACCAATATCCTGTAACTGTTCTCTGAATCCAATCGCAGCTCCAATTTCGTTCACG
GCTCTCAATTTCATCGAGGGTTTTACGCGCGGAGGTGGAGAGATGGAAGGTGGCGGAAATCGCCTTCTCCCAGCTGATGCTTTTCCATTGTTCCAGGAAGGTATC
GGGTTGGTTTTATCTCGTTGGTCAGCTCTTCAGTTGGCGGTGGACAATGAGTGGGGTGGTCGTGACTCTCGTCGTAAAGTTGAACTATTGTGCTCTGATATTTTT
ACATGGTTTACGCAGAACAAAGAGACACTATATATCGATGACTTAGAAATGATTCTTGATGAAACTATGCTTTCGTTGAACACTCAGGTTGATGATGGTAGCATT
GAGGAGGTTGCTGAAAAATTGATTTTCATGCACGAGGAGTGTGTGGATGGCAACTTTAGCTCTATCGGAAGGTTAAGACAATCCCCTCTTCCACGAGGTGCTCAT
TCTCATGTTAGTCAGGCTATGAGTGATGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGATGATGGTGATGTTGGAAATGGAAGCGATGGCATGAGAAATGAT
ATGATGGTGGATGCCATACAACAACAACCCAGGGCTGTCAATCAGCAGCCCCGTCCAGAGGCCTCAGCTCCAGCTGAAGATGGATGGGTTCAAGTCACATCAAGA
AGAAGTAGTAGGGGTACAAGAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAACCTTCACAAATCCAAGTCCGATTACGATGATCTCCGCCGCCGCCGCTGCGGTTGCTGCAAACGGCATCCCAAGCACCGCCAATCTCCCGGCGTTTGC
TCCCTATGTTTGACAGAAAAGCTCTCGCAAATCCTCTCCGCGACTACTTCATCGCGTAAAAACTCCGATTCTCTTTCTTCTTCCTCCTCCGATTCCTCTTCTTAT
TACTCCTCTGTTTCCTCTTGTTCTTCCTGTTCTTCGCCGAATCGGCCTTACGATAAGGCTACAGCGTCTTCGATCTATAAGAAGAGTAGATCGTTGGCGTTTGCG
TTGCGATTTAGACGAGGAGCAGATAGCGATAGTGGAAAGAAGAGTCACCTAGGGTTTTGGTCGAGGTTTCTGAATCGGCCGAGACGGAAGAGAATGGAATTGGAG
GAGGCTTTGATGCACTCTAGAACAAGCGCCGTGGTGCAGGGGAACGGCTCACCAATATCCTGTAACTGTTCTCTGAATCCAATCGCAGCTCCAATTTCGTTCACG
GCTCTCAATTTCATCGAGGGTTTTACGCGCGGAGGTGGAGAGATGGAAGGTGGCGGAAATCGCCTTCTCCCAGCTGATGCTTTTCCATTGTTCCAGGAAGGTATC
GGGTTGGTTTTATCTCGTTGGTCAGCTCTTCAGTTGGCGGTGGACAATGAGTGGGGTGGTCGTGACTCTCGTCGTAAAGTTGAACTATTGTGCTCTGATATTTTT
ACATGGTTTACGCAGAACAAAGAGACACTATATATCGATGACTTAGAAATGATTCTTGATGAAACTATGCTTTCGTTGAACACTCAGGTTGATGATGGTAGCATT
GAGGAGGTTGCTGAAAAATTGATTTTCATGCACGAGGAGTGTGTGGATGGCAACTTTAGCTCTATCGGAAGGTTAAGACAATCCCCTCTTCCACGAGGTGCTCAT
TCTCATGTTAGTCAGGCTATGAGTGATGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGATGATGGTGATGTTGGAAATGGAAGCGATGGCATGAGAAATGAT
ATGATGGTGGATGCCATACAACAACAACCCAGGGCTGTCAATCAGCAGCCCCGTCCAGAGGCCTCAGCTCCAGCTGAAGATGGATGGGTTCAAGTCACATCAAGA
AGAAGTAGTAGGGGTACAAGAAATTAA
Protein sequenceShow/hide protein sequence
MANLHKSKSDYDDLRRRRCGCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKNSDSLSSSSSDSSSYYSSVSSCSSCSSPNRPYDKATASSIYKKSRSLAFA
LRFRRGADSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRTSAVVQGNGSPISCNCSLNPIAAPISFTALNFIEGFTRGGGEMEGGGNRLLPADAFPLFQEGI
GLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIFMHEECVDGNFSSIGRLRQSPLPRGAH
SHVSQAMSDEEEEEEEDDDDDDGDVGNGSDGMRNDMMVDAIQQQPRAVNQQPRPEASAPAEDGWVQVTSRRSSRGTRN