; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh01G017940 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G017940
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionGlycosyl hydrolase family 35 protein
Genome locationCma_Chr01:11999562..12000360
RNA-Seq ExpressionCmaCh01G017940
SyntenyCmaCh01G017940
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608435.1 hypothetical protein SDJN03_01777, partial [Cucurbita argyrosperma subsp. sororia]2.7e-7190.54Show/hide
Query:  SPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLK--AADEHNKKKAHPS
        +PANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFW V LLLQLTSFLP FP+YINASSAS+MAVNHHHVNPNGCFSDMP NRKLK  AADEHNKKK HPS
Subjt:  SPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLK--AADEHNKKKAHPS

Query:  GVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA
         VNLDDYHPIDPVPSSKTS+KPGPIEHG PLLPHMPNPPPPA+PGDYA
Subjt:  GVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA

XP_022941193.1 uncharacterized protein LOC111446569 isoform X2 [Cucurbita moschata]5.3e-6782.8Show/hide
Query:  MDDPPSNISPANTPCTTG---CVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLKAADE
        MDDP     P       G   C+CVCVSELFDSSWVLSVMNLSGFW V LLLQLTSFLP FP+YINASSAS+MAVNHHHVNPNGC SDMPLNRKLKAADE
Subjt:  MDDPPSNISPANTPCTTG---CVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLKAADE

Query:  HNKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA
        HNKKK HPS VNLDDYHPIDPVPSSKTS+KPGPIEHG PLLPHMPNPPPPA+PGDYA
Subjt:  HNKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA

XP_022981993.1 uncharacterized protein LOC111480979 isoform X1 [Cucurbita maxima]2.0e-8298.72Show/hide
Query:  MDDPPSNISPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLK--AADEH
        MDDPPSNISPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLK  AADEH
Subjt:  MDDPPSNISPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLK--AADEH

Query:  NKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA
        NKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA
Subjt:  NKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA

XP_022981994.1 uncharacterized protein LOC111480979 isoform X2 [Cucurbita maxima]6.2e-84100Show/hide
Query:  MDDPPSNISPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLKAADEHNK
        MDDPPSNISPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLKAADEHNK
Subjt:  MDDPPSNISPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLKAADEHNK

Query:  KKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA
        KKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA
Subjt:  KKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA

XP_023525729.1 uncharacterized protein LOC111789247 [Cucurbita pepo subsp. pepo]2.6e-6680.75Show/hide
Query:  MDDP-----PSNISPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLK--
        MDDP     P  +      C   CVCVCVSELFDSSWVLSVMNLSGFW +  LLQLTSF+PSFPTYINASSAS+MAVNHHHVNPNGCFSDMP NRKLK  
Subjt:  MDDP-----PSNISPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLK--

Query:  AADEHNKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA
        AADEHNKKK HPS VNLDDYHPIDPVPSSKTS+KPGPIEHG PLLPHMPNPPPPA+PGDYA
Subjt:  AADEHNKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA

TrEMBL top hitse value%identityAlignment
A0A0A0L2J3 Uncharacterized protein5.9e-4070.49Show/hide
Query:  MNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLK-AADE---HNKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIE
        M LSGFW    +LQ T  L  FP+YINASS+S++A+NHHHVN N C SD+ LNRKLK   DE   H +KK HP  +NLDDYHPIDPVPSSKTS+KPGPIE
Subjt:  MNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLK-AADE---HNKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIE

Query:  HGAPLLPHMPNPPPPAQPGDYA
        HGAPLLPHMPNPPPP+QPG YA
Subjt:  HGAPLLPHMPNPPPPAQPGDYA

A0A6J1FLR4 uncharacterized protein LOC111446569 isoform X18.2e-6681.76Show/hide
Query:  MDDPPSNISPANTPCTTG---CVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLK--AA
        MDDP     P       G   C+CVCVSELFDSSWVLSVMNLSGFW V LLLQLTSFLP FP+YINASSAS+MAVNHHHVNPNGC SDMPLNRKLK  AA
Subjt:  MDDPPSNISPANTPCTTG---CVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLK--AA

Query:  DEHNKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA
        DEHNKKK HPS VNLDDYHPIDPVPSSKTS+KPGPIEHG PLLPHMPNPPPPA+PGDYA
Subjt:  DEHNKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA

A0A6J1FRF9 uncharacterized protein LOC111446569 isoform X22.5e-6782.8Show/hide
Query:  MDDPPSNISPANTPCTTG---CVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLKAADE
        MDDP     P       G   C+CVCVSELFDSSWVLSVMNLSGFW V LLLQLTSFLP FP+YINASSAS+MAVNHHHVNPNGC SDMPLNRKLKAADE
Subjt:  MDDPPSNISPANTPCTTG---CVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLKAADE

Query:  HNKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA
        HNKKK HPS VNLDDYHPIDPVPSSKTS+KPGPIEHG PLLPHMPNPPPPA+PGDYA
Subjt:  HNKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA

A0A6J1J3D1 uncharacterized protein LOC111480979 isoform X23.0e-84100Show/hide
Query:  MDDPPSNISPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLKAADEHNK
        MDDPPSNISPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLKAADEHNK
Subjt:  MDDPPSNISPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLKAADEHNK

Query:  KKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA
        KKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA
Subjt:  KKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA

A0A6J1J3M3 uncharacterized protein LOC111480979 isoform X19.6e-8398.72Show/hide
Query:  MDDPPSNISPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLK--AADEH
        MDDPPSNISPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLK  AADEH
Subjt:  MDDPPSNISPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLK--AADEH

Query:  NKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA
        NKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA
Subjt:  NKKKAHPSGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01075.1 Glycosyl hydrolase family 35 protein2.6e-0859.52Show/hide
Query:  VNLDDYH-PIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPA
        V L+DY+ P+DP P++K S+KPGPIEHG PL P++P PP P+
Subjt:  VNLDDYH-PIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGACCCCCCTTCCAACATTTCTCCCGCCAACACTCCTTGCACAACAGGGTGTGTGTGTGTGTGTGTTTCGGAGCTCTTCGATTCATCCTGGGTCCTGTCC
GTTATGAATCTTTCTGGGTTCTGGGCTGTGTTGTTGCTGCTCCAATTAACTTCATTCCTGCCTTCCTTTCCCACCTATATAAATGCCTCCTCCGCCTCCGAAATG
GCTGTGAACCACCACCATGTTAACCCAAATGGATGCTTCTCCGACATGCCATTAAACAGGAAGCTGAAGGCTGCTGATGAACATAACAAAAAGAAGGCTCACCCA
AGTGGTGTAAATCTCGATGACTACCATCCCATTGATCCTGTTCCAAGTTCAAAGACATCACTAAAACCTGGGCCCATAGAGCACGGCGCTCCTCTCCTCCCCCAT
ATGCCAAATCCTCCACCTCCCGCTCAGCCGGGCGATTATGCTTAG
mRNA sequenceShow/hide mRNA sequence
ACCCAATGCAGATGATATGATGATAAAACAAAACATTGAAGTTCTCCTCTTTTCTTTTATTGTTCCTCTTCTGTTCCAATTAAATGCCATTCCATATTTCCACCC
TCGTTTTAAAGCCCTCATGAGTACTCATGGACGACCCCCCTTCCAACATTTCTCCCGCCAACACTCCTTGCACAACAGGGTGTGTGTGTGTGTGTGTTTCGGAGC
TCTTCGATTCATCCTGGGTCCTGTCCGTTATGAATCTTTCTGGGTTCTGGGCTGTGTTGTTGCTGCTCCAATTAACTTCATTCCTGCCTTCCTTTCCCACCTATA
TAAATGCCTCCTCCGCCTCCGAAATGGCTGTGAACCACCACCATGTTAACCCAAATGGATGCTTCTCCGACATGCCATTAAACAGGAAGCTGAAGGCTGCTGATG
AACATAACAAAAAGAAGGCTCACCCAAGTGGTGTAAATCTCGATGACTACCATCCCATTGATCCTGTTCCAAGTTCAAAGACATCACTAAAACCTGGGCCCATAG
AGCACGGCGCTCCTCTCCTCCCCCATATGCCAAATCCTCCACCTCCCGCTCAGCCGGGCGATTATGCTTAGACAGCTC
Protein sequenceShow/hide protein sequence
MDDPPSNISPANTPCTTGCVCVCVSELFDSSWVLSVMNLSGFWAVLLLLQLTSFLPSFPTYINASSASEMAVNHHHVNPNGCFSDMPLNRKLKAADEHNKKKAHP
SGVNLDDYHPIDPVPSSKTSLKPGPIEHGAPLLPHMPNPPPPAQPGDYA