| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6608449.1 Protein DCL-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] | 2.4e-109 | 97.96 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
MVASLLLRGHPLIRLGLRNRGLCTGI+QVTRRSCCTAMPASTPPGGGLSSAENTTSVLS TDPPKYQRWDEPGYRKWKNQEEEILSDIDP+ISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYA+RFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
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| KAG7037785.1 Protein DCL-like, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma] | 4.6e-108 | 97.94 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
MVASLLLRGHPLIRLGLRNRGLCTGI+QVTRRSCCTAMPASTPPGGGLSSAENTTSVLS TDPPKYQRWDEPGYRKWKNQEEEILSDIDP+ISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKR
SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYA+RFIREHFKR
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKR
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| XP_022940238.1 protein DCL homolog, chloroplastic-like [Cucurbita moschata] | 7.8e-108 | 96.94 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
MVASLLLRGHPLIRLGLRNRGLC GI+QVTRRSCCTA+PASTPPGGGLSSAENTTSVLS TDPPKYQRW+EPGYRKWKNQEEEILSDIDPIISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYA+RFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
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| XP_022982288.1 protein DCL homolog, chloroplastic-like isoform X1 [Cucurbita maxima] | 7.6e-111 | 100 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
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| XP_023523235.1 protein DCL homolog, chloroplastic-like [Cucurbita pepo subsp. pepo] | 1.0e-107 | 95.41 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
MVASLLLRGHPLIRLGLRNRGLCTG+++VTRRSCCTAMPASTPPGGGLSSAENTTSVLS TDPP YQRWDEPGYRKWKNQEEEILSDIDP+ISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
SNRYVDGERLTFEDEKI+VDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFV+RTDGGWIDFSYQKCLRAYIRNKYPLYA+RFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3BU88 protein DCL, chloroplastic | 6.5e-92 | 81.12 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
M AS L RGHPL+RLGL+ RGLCTG++QVTRRSCC+A ASTP G L++ +N TS++S+++PPKYQRWDEP YRKWKNQEEEIL DI+PII LTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
S+RY DGERLT EDE+ VVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRC FVIRTDGGWIDFSYQKCLRAYIRNKYP +A+RFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
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| A0A6J1C4J4 protein DCL, chloroplastic isoform X1 | 6.7e-97 | 87.24 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
M ASLLLRGHPL+RLGLR+RGLCTGI+QVTRRSCCTA A TPP G L+SAEN TSVLS++DPPKY RWDEP YRKWK+QEEE+L+DI+PIISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
SNRYVDGERLT DE+IVV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYP YA+RFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
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| A0A6J1FNQ4 protein DCL homolog, chloroplastic-like | 3.8e-108 | 96.94 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
MVASLLLRGHPLIRLGLRNRGLC GI+QVTRRSCCTA+PASTPPGGGLSSAENTTSVLS TDPPKYQRW+EPGYRKWKNQEEEILSDIDPIISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYA+RFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
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| A0A6J1IHJ1 protein DCL homolog, chloroplastic-like | 3.6e-90 | 81.12 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
M ASLLLRGHPL+R GL +RGLC+G++QVTRRSCCTA ASTPP G L+SAENT SV S + KYQRW EP YRKWK+QE+EILSD++P++SLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
SNRYVDGERLT EDE+IVVDRLLAHHPHAEDKIGCGLE IMVDRHPQFR+SRCLFV+RTDGGWIDFSYQKCLRAYIR+KYP YA+ FIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
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| A0A6J1J4G4 protein DCL homolog, chloroplastic-like isoform X1 | 3.7e-111 | 100 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCTGILQVTRRSCCTAMPASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKRGS
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| SwissProt top hits | e value | %identity | Alignment |
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| Q42463 Protein DCL, chloroplastic | 1.7e-28 | 37.43 | Show/hide |
Query: RSCCTAMPASTPPGGGLSSAEN--------TTSVLSTTDPP---KYQRWDEPGYRK-----WKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDE
R C A + GGG+ S +T + +T++ K + DE G + W + E++IL D P++ + ILHS +Y G+RL+ + +
Subjt: RSCCTAMPASTPPGGGLSSAEN--------TTSVLSTTDPP---KYQRWDEPGYRK-----WKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDE
Query: KIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKR
+ ++ RLL +HP + KIG G++ I V HP F +SRCLF++R DG +DFSY KC++ IR YPLYAD FI HF++
Subjt: KIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADRFIREHFKR
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| Q5D869 DNA-directed RNA polymerase V subunit 1 | 5.6e-24 | 40.52 | Show/hide |
Query: NQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRN
++E+E+LSD++P++ ++I+H + Y DG+ ++ +D+ V++++L HP E K+G G++ I VD+H F SRC FV+ TDG DFSY+K L Y+
Subjt: NQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRN
Query: KYPLYADRFIREHFKR
KYP A+ FI ++F +
Subjt: KYPLYADRFIREHFKR
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| Q9C642 Protein DCL homolog, chloroplastic | 1.5e-29 | 47.37 | Show/hide |
Query: EEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKY
E++IL P++ + ILHS +Y + +RL+ E E+ +++ LL +HP E KIGCG++ IMV HP F SRC+F++R DG +DFSY KC++ I+ KY
Subjt: EEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKY
Query: PLYADRFIREHFKR
PLYAD FI HF++
Subjt: PLYADRFIREHFKR
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| Q9LQ02 DNA-directed RNA polymerase IV subunit 1 | 3.1e-06 | 32.5 | Show/hide |
Query: WKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYI
WKN I+ + K ILHS Y E L DE + V +L HP++ +KIG G++ I V + + S C V+R DG + DFSY KC+
Subjt: WKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYI
Query: RNKYPLYADRFIREHFKRGS
+ P + + ++ K G+
Subjt: RNKYPLYADRFIREHFKRGS
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G45230.1 Protein of unknown function (DUF3223) | 1.1e-30 | 47.37 | Show/hide |
Query: EEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKY
E++IL P++ + ILHS +Y + +RL+ E E+ +++ LL +HP E KIGCG++ IMV HP F SRC+F++R DG +DFSY KC++ I+ KY
Subjt: EEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKY
Query: PLYADRFIREHFKR
PLYAD FI HF++
Subjt: PLYADRFIREHFKR
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| AT1G45230.2 Protein of unknown function (DUF3223) | 2.4e-30 | 47.37 | Show/hide |
Query: EEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKY
E++IL P++ + ILHS +Y + +RL+ E E+ +++ LL +HP E KIGCG++ IMV HP F SRC+F++R DG +DFSY KC++ I+ KY
Subjt: EEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKY
Query: PLYADRFIREHFKR
PLYAD FI HF++
Subjt: PLYADRFIREHFKR
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| AT1G63020.1 nuclear RNA polymerase D1A | 2.2e-07 | 32.5 | Show/hide |
Query: WKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYI
WKN I+ + K ILHS Y E L DE + V +L HP++ +KIG G++ I V + + S C V+R DG + DFSY KC+
Subjt: WKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYI
Query: RNKYPLYADRFIREHFKRGS
+ P + + ++ K G+
Subjt: RNKYPLYADRFIREHFKRGS
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| AT2G40030.1 nuclear RNA polymerase D1B | 4.0e-25 | 40.52 | Show/hide |
Query: NQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRN
++E+E+LSD++P++ ++I+H + Y DG+ ++ +D+ V++++L HP E K+G G++ I VD+H F SRC FV+ TDG DFSY+K L Y+
Subjt: NQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRN
Query: KYPLYADRFIREHFKR
KYP A+ FI ++F +
Subjt: KYPLYADRFIREHFKR
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| AT3G46630.1 Protein of unknown function (DUF3223) | 5.9e-61 | 57.14 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRG-----LCTGILQVTRRSCCTAM---------PASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILS
M + LLLR PL+R G N + GIL RR C+ + +P G ++A N TS + R+++P YRKWKN E EIL
Subjt: MVASLLLRGHPLIRLGLRNRG-----LCTGILQVTRRSCCTAM---------PASTPPGGGLSSAENTTSVLSTTDPPKYQRWDEPGYRKWKNQEEEILS
Query: DIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADR
DI+PI L KEILHS+RY+DGERL FEDEKIV+++LL +HP+++DKIGCGL+ IMVDRHPQFRHSRCLFV+RTDGGWIDFSYQKCLRAY+R+KYP +A+R
Subjt: DIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYADR
Query: FIREHFKRGS
FIREHFKR S
Subjt: FIREHFKRGS
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