; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh01G018380 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G018380
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionCold regulated protein 27
Genome locationCma_Chr01:12149859..12152029
RNA-Seq ExpressionCmaCh01G018380
SyntenyCmaCh01G018380
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608473.1 Cold-regulated protein 27, partial [Cucurbita argyrosperma subsp. sororia]1.6e-16097.64Show/hide
Query:  MTTVKVLLSPNTAFRSLPKDLSPLARFHFSFLHLSPSRHCKSGDNPSSSSVFMELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTE
        MTTVKVLLSPNTAFRSLPKDLSPLARFHFS   LS SRHCKSGDNPSSSSVFMELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTE
Subjt:  MTTVKVLLSPNTAFRSLPKDLSPLARFHFSFLHLSPSRHCKSGDNPSSSSVFMELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTE

Query:  SVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIH
        SVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIH
Subjt:  SVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIH

Query:  HFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
        HFRAAR+NKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLS+HYIYNNKE+SDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
Subjt:  HFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP

KAG7037801.1 hypothetical protein SDJN02_01432 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-13197.94Show/hide
Query:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
        MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
Subjt:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ

Query:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNN
        AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAAR+NK+VACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLS+HYIYNN
Subjt:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNN

Query:  KEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQV
        KE+SDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQ+
Subjt:  KEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQV

XP_022940327.1 uncharacterized protein LOC111445977 isoform X1 [Cucurbita moschata]7.9e-12896.33Show/hide
Query:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
        ME+LPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
Subjt:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ

Query:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNN
        AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFG    +GPMRACNSDLS+H IYNN
Subjt:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNN

Query:  KEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
        KE+SDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
Subjt:  KEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP

XP_022982275.1 uncharacterized protein LOC111481154 [Cucurbita maxima]9.5e-166100Show/hide
Query:  MTTVKVLLSPNTAFRSLPKDLSPLARFHFSFLHLSPSRHCKSGDNPSSSSVFMELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTE
        MTTVKVLLSPNTAFRSLPKDLSPLARFHFSFLHLSPSRHCKSGDNPSSSSVFMELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTE
Subjt:  MTTVKVLLSPNTAFRSLPKDLSPLARFHFSFLHLSPSRHCKSGDNPSSSSVFMELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTE

Query:  SVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIH
        SVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIH
Subjt:  SVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIH

Query:  HFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
        HFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
Subjt:  HFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP

XP_023525276.1 uncharacterized protein LOC111788927 isoform X1 [Cucurbita pepo subsp. pepo]3.1e-13297.96Show/hide
Query:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
        MELLPPNLENLKPKETRTDSLIS LAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
Subjt:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ

Query:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNN
        AASHVHSHVGQFKVLRQGSWKNVNFEPTE+RPNLLNDY+ALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLS+HYIYNN
Subjt:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNN

Query:  KEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
        KE+SDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
Subjt:  KEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP

TrEMBL top hitse value%identityAlignment
A0A0A0L0A2 Polyketide_cyc domain-containing protein1.2e-9267.01Show/hide
Query:  SLPKDLS-PLARFHFSFLHLSPS----------RHCKSGDNPSSSSVFMELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPS
        SL   +S PLARFH S LHLS +          +  K G   SSSS FMELLPPNL++L P+ETR DSL+SE   D+STE     ESSS+GT MT+SVPS
Subjt:  SLPKDLS-PLARFHFSFLHLSPS----------RHCKSGDNPSSSSVFMELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPS

Query:  DWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRA
        DWTDEKHHLFLESMEASFVSQMFDS HS G+   K+NSS TKL  +SQ+ASH HS  GQFKVLR+GSWKN+NFEPTE+R N LN+YQALS NPWIHHFRA
Subjt:  DWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRA

Query:  ARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQV
        ARKNKNV CKS AI SR RN L  G  NNSGP+RA +SDLS+ YI NNKE+SDQNFVD   EV +V KGS DCN KR   SETN LINDQ+
Subjt:  ARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQV

A0A6J1CJ78 uncharacterized protein LOC111011825 isoform X31.4e-9073.58Show/hide
Query:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
        ME  PPN+EN+K  E +TDSL  E A D++TE PL  ESSSQGT+MTESVPSDWTDEKHH FLESMEASFVSQMFDSAHS G+  GKENSS TKLHGQ+Q
Subjt:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ

Query:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRN-LLPFGGDNNSGPMRACNSDLSRHYIYN
        +AS++HSH GQFKVLR+GSWKN+NFEPTE+RP++LND QALSRNPWIHHFRAARK KNVACKS AISS +RN   PFG  NNSGPMRAC+S LS+ YI +
Subjt:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRN-LLPFGGDNNSGPMRACNSDLSRHYIYN

Query:  NKEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
        N+E+SDQNFVD +REVE   KG+N C  KRV T ETN L NDQVVP
Subjt:  NKEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP

A0A6J1FJA4 uncharacterized protein LOC111445977 isoform X13.8e-12896.33Show/hide
Query:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
        ME+LPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ
Subjt:  MELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQ

Query:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNN
        AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFG    +GPMRACNSDLS+H IYNN
Subjt:  AASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNN

Query:  KEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
        KE+SDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
Subjt:  KEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP

A0A6J1FNZ0 uncharacterized protein LOC111445977 isoform X21.1e-10396Show/hide
Query:  MTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNP
        MTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNP
Subjt:  MTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNP

Query:  WIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
        WIHHFRAARKNKNVACKSPAISSRKRNLLPFG    +GPMRACNSDLS+H IYNNKE+SDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
Subjt:  WIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP

A0A6J1J278 uncharacterized protein LOC1114811544.6e-166100Show/hide
Query:  MTTVKVLLSPNTAFRSLPKDLSPLARFHFSFLHLSPSRHCKSGDNPSSSSVFMELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTE
        MTTVKVLLSPNTAFRSLPKDLSPLARFHFSFLHLSPSRHCKSGDNPSSSSVFMELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTE
Subjt:  MTTVKVLLSPNTAFRSLPKDLSPLARFHFSFLHLSPSRHCKSGDNPSSSSVFMELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTE

Query:  SVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIH
        SVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIH
Subjt:  SVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIH

Query:  HFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
        HFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
Subjt:  HFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 272.8e-1129.95Show/hide
Query:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-
        + +SS  +   E + ++WT+EKH L+L+SMEASFV Q+++S    G     EN S +   G  +  S       QFKVL  G W+ +N +  E R N   
Subjt:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-

Query:  --NDYQALSRNPWIHHFRAARKNKNVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTK
          N ++ L R+PWI H++   K +      P     + S+ K+ +   G  ++   + + + D  +  +    E+SDQNFV+      +  KG N  + K
Subjt:  --NDYQALSRNPWIHHFRAARKNKNVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTK

Query:  RVKTSETNDLINDQVVP
              +     DQVVP
Subjt:  RVKTSETNDLINDQVVP

Q8L983 Cold-regulated protein 287.9e-0625.96Show/hide
Query:  DSLISELAMDESTEAPLQDESSSQGTRMTESVPSD--------WTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVG
        D  +SE + +  +E+ L +   S  T  T    +D        WT+EKH+ +L+ +E+SFV Q++ S   GGT          +L       S+ H    
Subjt:  DSLISELAMDESTEAPLQDESSSQGTRMTESVPSD--------WTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVG

Query:  QFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVD
        QF VL+ G W+ VNF   ++          L  +      R + +NK                 P   + N         D+  H    + E S QNF +
Subjt:  QFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVD

Query:  GEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
         E E E   KG      +R   ++ + L  DQVVP
Subjt:  GEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)5.6e-0725.96Show/hide
Query:  DSLISELAMDESTEAPLQDESSSQGTRMTESVPSD--------WTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVG
        D  +SE + +  +E+ L +   S  T  T    +D        WT+EKH+ +L+ +E+SFV Q++ S   GGT          +L       S+ H    
Subjt:  DSLISELAMDESTEAPLQDESSSQGTRMTESVPSD--------WTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVG

Query:  QFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVD
        QF VL+ G W+ VNF   ++          L  +      R + +NK                 P   + N         D+  H    + E S QNF +
Subjt:  QFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVD

Query:  GEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
         E E E   KG      +R   ++ + L  DQVVP
Subjt:  GEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP

AT4G33980.2 FUNCTIONS IN: molecular_function unknown5.6e-0725.96Show/hide
Query:  DSLISELAMDESTEAPLQDESSSQGTRMTESVPSD--------WTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVG
        D  +SE + +  +E+ L +   S  T  T    +D        WT+EKH+ +L+ +E+SFV Q++ S   GGT          +L       S+ H    
Subjt:  DSLISELAMDESTEAPLQDESSSQGTRMTESVPSD--------WTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVG

Query:  QFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVD
        QF VL+ G W+ VNF   ++          L  +      R + +NK                 P   + N         D+  H    + E S QNF +
Subjt:  QFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVD

Query:  GEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP
         E E E   KG      +R   ++ + L  DQVVP
Subjt:  GEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP

AT5G42900.1 cold regulated gene 272.0e-1229.95Show/hide
Query:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-
        + +SS  +   E + ++WT+EKH L+L+SMEASFV Q+++S    G     EN S +   G  +  S       QFKVL  G W+ +N +  E R N   
Subjt:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-

Query:  --NDYQALSRNPWIHHFRAARKNKNVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTK
          N ++ L R+PWI H++   K +      P     + S+ K+ +   G  ++   + + + D  +  +    E+SDQNFV+      +  KG N  + K
Subjt:  --NDYQALSRNPWIHHFRAARKNKNVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTK

Query:  RVKTSETNDLINDQVVP
              +     DQVVP
Subjt:  RVKTSETNDLINDQVVP

AT5G42900.2 cold regulated gene 272.0e-1229.95Show/hide
Query:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-
        + +SS  +   E + ++WT+EKH L+L+SMEASFV Q+++S    G     EN S +   G  +  S       QFKVL  G W+ +N +  E R N   
Subjt:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-

Query:  --NDYQALSRNPWIHHFRAARKNKNVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTK
          N ++ L R+PWI H++   K +      P     + S+ K+ +   G  ++   + + + D  +  +    E+SDQNFV+      +  KG N  + K
Subjt:  --NDYQALSRNPWIHHFRAARKNKNVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTK

Query:  RVKTSETNDLINDQVVP
              +     DQVVP
Subjt:  RVKTSETNDLINDQVVP

AT5G42900.3 cold regulated gene 271.2e-1230.41Show/hide
Query:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-
        + +SS  +   E + ++WT+EKH L+L+SMEASFV Q+++S    G     EN S +   G  +  S       QFKVL  G W+ +N +  E R N   
Subjt:  DESSSQGTRMTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLL-

Query:  --NDYQALSRNPWIHHFRAARKNKNVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTK
          N ++ L R+PWI H++   K +      P     + S+ K+ +   G  ++   + + + D     I   +E+SDQNFV+      +  KG N  + K
Subjt:  --NDYQALSRNPWIHHFRAARKNKNVACKSP-----AISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTK

Query:  RVKTSETNDLINDQVVP
              +     DQVVP
Subjt:  RVKTSETNDLINDQVVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTGTGAAGGTTCTTTTGTCCCCAAACACGGCCTTTCGCTCTCTTCCTAAAGATCTCTCTCCACTGGCCCGCTTCCATTTTTCTTTTCTCCATCTCTCTCCCTC
TCGCCATTGCAAATCTGGAGATAATCCTTCATCTTCTTCTGTTTTCATGGAGCTTTTGCCTCCAAATTTAGAGAATCTCAAGCCTAAAGAAACTCGGACCGACTCACTGA
TCTCTGAATTAGCCATGGACGAGTCAACCGAGGCTCCCCTACAGGACGAATCTTCTAGCCAGGGCACTCGTATGACGGAGTCTGTACCTTCTGATTGGACCGATGAGAAG
CACCATTTGTTCCTTGAATCCATGGAGGCATCTTTTGTCAGCCAGATGTTTGATTCTGCGCATTCAGGTGGTACCGGCTCCGGCAAGGAAAATTCATCATGGACAAAATT
GCACGGCCAAAGCCAGGCCGCTTCTCATGTCCACTCACATGTTGGCCAGTTTAAGGTTCTTCGACAAGGCAGCTGGAAGAATGTTAATTTTGAACCAACTGAAGCTCGGC
CGAATTTATTGAATGATTACCAGGCTCTGTCGCGCAATCCATGGATACATCACTTCAGAGCTGCACGCAAAAACAAAAATGTTGCATGTAAAAGTCCAGCCATCAGTTCA
AGAAAAAGGAATTTGTTGCCATTTGGAGGAGATAATAATTCAGGACCTATGCGTGCTTGTAACTCTGATTTGTCTCGGCATTATATATACAACAATAAAGAAATGTCAGA
TCAGAACTTTGTTGATGGAGAAAGGGAAGTTGAAAAAGTTGCAAAGGGTAGCAATGATTGCAATACCAAAAGGGTAAAAACTTCAGAAACCAATGATTTGATCAACGACC
AGGTTGTTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAACTGTGAAGGTTCTTTTGTCCCCAAACACGGCCTTTCGCTCTCTTCCTAAAGATCTCTCTCCACTGGCCCGCTTCCATTTTTCTTTTCTCCATCTCTCTCCCTC
TCGCCATTGCAAATCTGGAGATAATCCTTCATCTTCTTCTGTTTTCATGGAGCTTTTGCCTCCAAATTTAGAGAATCTCAAGCCTAAAGAAACTCGGACCGACTCACTGA
TCTCTGAATTAGCCATGGACGAGTCAACCGAGGCTCCCCTACAGGACGAATCTTCTAGCCAGGGCACTCGTATGACGGAGTCTGTACCTTCTGATTGGACCGATGAGAAG
CACCATTTGTTCCTTGAATCCATGGAGGCATCTTTTGTCAGCCAGATGTTTGATTCTGCGCATTCAGGTGGTACCGGCTCCGGCAAGGAAAATTCATCATGGACAAAATT
GCACGGCCAAAGCCAGGCCGCTTCTCATGTCCACTCACATGTTGGCCAGTTTAAGGTTCTTCGACAAGGCAGCTGGAAGAATGTTAATTTTGAACCAACTGAAGCTCGGC
CGAATTTATTGAATGATTACCAGGCTCTGTCGCGCAATCCATGGATACATCACTTCAGAGCTGCACGCAAAAACAAAAATGTTGCATGTAAAAGTCCAGCCATCAGTTCA
AGAAAAAGGAATTTGTTGCCATTTGGAGGAGATAATAATTCAGGACCTATGCGTGCTTGTAACTCTGATTTGTCTCGGCATTATATATACAACAATAAAGAAATGTCAGA
TCAGAACTTTGTTGATGGAGAAAGGGAAGTTGAAAAAGTTGCAAAGGGTAGCAATGATTGCAATACCAAAAGGGTAAAAACTTCAGAAACCAATGATTTGATCAACGACC
AGGTTGTTCCTTAAGTTCCACGAAAAGGAGATGATGCTTAACAAGAATTCTCTTACAGCCAGCAGATAGCTATATCCATGATTTTCGCCAAGACGGACTTTGTAGACTAC
TTTTCTAACCCGGGAAAGGCTATAGATGATCAGAGATTGTTGGTGAAATCTGTAAAATGCTCATTTTGATGCTCTTGGTTTGTCTGTTGATTTAAGTTCTAATACCCTTG
AGCGTCTGCAGTTGCGTAGTAATTAGCAAATCAGCAGCTATGGCTTTGACGGGGTAGATGAGTATGGTAATGTAATTCATCATATGTATAATATATATATATATAATTTC
TTTTGATACACCAAGGC
Protein sequenceShow/hide protein sequence
MTTVKVLLSPNTAFRSLPKDLSPLARFHFSFLHLSPSRHCKSGDNPSSSSVFMELLPPNLENLKPKETRTDSLISELAMDESTEAPLQDESSSQGTRMTESVPSDWTDEK
HHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHVHSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPAISS
RKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDCNTKRVKTSETNDLINDQVVP